Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_L13
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 313 9e-86
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 313 1e-85
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 313 1e-85
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 313 1e-85
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 313 1e-85
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 313 1e-85
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 313 1e-85
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 312 3e-85
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 308 3e-84
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 293 1e-79
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 238 3e-63
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 201 6e-52
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 163 1e-40
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 163 1e-40
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 163 1e-40
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 162 2e-40
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 160 1e-39
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 131 7e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 86 3e-17
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 48 1e-05
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 36 0.028
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 35 0.084
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.45
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 30 1.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 29 4.2
U64605-8|AAF98602.1| 472|Caenorhabditis elegans Sorting nexin p... 28 7.3
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 9.7
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 313 bits (769), Expect = 9e-86
Identities = 147/157 (93%), Positives = 148/157 (94%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 530
KYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 531 NTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
NTPAMYVAIQAVLSLYASGRTTGIVLDSG GV+ P
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 165
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 313 bits (768), Expect = 1e-85
Identities = 146/157 (92%), Positives = 148/157 (94%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 530
KYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 531 NTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
NTPAMYVAIQAVLSLYASGRTTG+VLDSG GV+ P
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 313 bits (768), Expect = 1e-85
Identities = 146/157 (92%), Positives = 148/157 (94%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 530
KYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 531 NTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
NTPAMYVAIQAVLSLYASGRTTG+VLDSG GV+ P
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 313 bits (768), Expect = 1e-85
Identities = 146/157 (92%), Positives = 148/157 (94%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 530
KYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 531 NTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
NTPAMYVAIQAVLSLYASGRTTG+VLDSG GV+ P
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 313 bits (768), Expect = 1e-85
Identities = 146/157 (92%), Positives = 148/157 (94%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 530
KYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 531 NTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
NTPAMYVAIQAVLSLYASGRTTG+VLDSG GV+ P
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 313 bits (768), Expect = 1e-85
Identities = 146/157 (92%), Positives = 148/157 (94%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 530
KYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 531 NTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
NTPAMYVAIQAVLSLYASGRTTG+VLDSG GV+ P
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 313 bits (768), Expect = 1e-85
Identities = 146/157 (92%), Positives = 148/157 (94%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 530
KYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 531 NTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
NTPAMYVAIQAVLSLYASGRTTG+VLDSG GV+ P
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 312 bits (765), Expect = 3e-85
Identities = 145/157 (92%), Positives = 148/157 (94%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
L++ NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 530
KYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 531 NTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
NTPAMYVAIQAVLSLYASGRTTGIVLDSG GV+ P
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 165
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 308 bits (757), Expect = 3e-84
Identities = 143/161 (88%), Positives = 149/161 (92%)
Frame = +3
Query: 159 KLPRLVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRG 338
++ LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRG
Sbjct: 4 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 339 ILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIM 518
ILTLKYPIEHGIVTNWDDM KIWHHTFYNELR+APEEHPVLLTEAPLNPK+NRE MT IM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIM 123
Query: 519 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
FETFNTPAMYV IQAVLSLYASGRTTGIVLD+G GV+ P
Sbjct: 124 FETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVP 164
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 293 bits (718), Expect = 1e-79
Identities = 136/147 (92%), Positives = 139/147 (94%)
Frame = +3
Query: 201 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIVT 380
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 381 NWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETFNTPAMYVAIQ 560
NWDDM KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 561 AVLSLYASGRTTGIVLDSGXGVSTPCP 641
AVLSLYASGRTTG+VLDSG GV+ P
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVP 151
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 238 bits (583), Expect = 3e-63
Identities = 111/121 (91%), Positives = 113/121 (93%)
Frame = +3
Query: 279 MVGMGXKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPV 458
MVGMG KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 459 LLTEAPLNPKANREXMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPC 638
LLTEAPLNPKANRE MT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSG GV+
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 639 P 641
P
Sbjct: 121 P 121
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 201 bits (490), Expect = 6e-52
Identities = 90/161 (55%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
+V+ NGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 351 KYPIEHGIVTNWDDMXKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFET 527
+YP+EHGIV NW DM KIW + F ++L++ PEEHPVLLT+APLNP NRE I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 528 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCPSTK 650
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSG GV+ P K
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVK 171
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 163 bits (396), Expect = 1e-40
Identities = 75/78 (96%), Positives = 75/78 (96%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKI 404
KYPIEHGIVTNWDDM KI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 163 bits (396), Expect = 1e-40
Identities = 75/78 (96%), Positives = 75/78 (96%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKI 404
KYPIEHGIVTNWDDM KI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 163 bits (396), Expect = 1e-40
Identities = 75/78 (96%), Positives = 75/78 (96%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDMXKI 404
KYPIEHGIVTNWDDM KI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 162 bits (394), Expect = 2e-40
Identities = 80/160 (50%), Positives = 108/160 (67%), Gaps = 3/160 (1%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VG-MGXKDSYVGDEAQSKRGIL 344
+VV NG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 345 TLKYPIEHGIVTNWDDMXKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREXMTXIMF 521
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NRE M +MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 522 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
E + ++YVA+QAVL+LYA G TG+V+DSG GV+ CP
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICP 168
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 160 bits (388), Expect = 1e-39
Identities = 73/75 (97%), Positives = 73/75 (97%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGILTL 350
LVV NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 351 KYPIEHGIVTNWDDM 395
KYPIEHGIVTNWDDM
Sbjct: 69 KYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 131 bits (316), Expect = 7e-31
Identities = 77/182 (42%), Positives = 101/182 (55%), Gaps = 21/182 (11%)
Frame = +3
Query: 159 KLPRLVVXNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQGVM----VGMGXKDS- 305
+LP V+ NG+G K G+AG+ P+ + PS V Q + VG G D
Sbjct: 5 QLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLD 64
Query: 306 -YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPL 479
++GDEA S T+KYPI HGIV +WD M + W + LR PE+H LLTE PL
Sbjct: 65 FFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPL 124
Query: 480 NPKANREXMTXIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGXGVSTP 635
N NRE IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSG GV+
Sbjct: 125 NTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHC 184
Query: 636 CP 641
P
Sbjct: 185 IP 186
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 86.2 bits (204), Expect = 3e-17
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGXKDSYVGDEAQSKR--- 335
LV GS + GFAG++ P+ PS + + + + Q+KR
Sbjct: 14 LVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKREKN 73
Query: 336 ---GILTLKYP---------IEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPL 479
G + P ++ G++ +W+ KI H++ N L P EHPVL +E+
Sbjct: 74 FFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSW 133
Query: 480 NPKANREXMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVSTPCP 641
N +A RE +T IMFE F PA Y++ VLS +A GRT G+++DSG ++ P
Sbjct: 134 NDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVP 187
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.6 bits (108), Expect = 1e-05
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Frame = +3
Query: 162 LPRLVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGI 341
L ++ NG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 342 LTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMF 521
++ PIE G V NWD +IW TF + V + LT+ A + + I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 522 ETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSGXGVST 632
+ F ++ + L S + +V+DSG +T
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTT 156
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.6 bits (108), Expect = 1e-05
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Frame = +3
Query: 162 LPRLVVXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGI 341
L ++ NG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 342 LTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMF 521
++ PIE G V NWD +IW TF + V + LT+ A + + I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 522 ETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSGXGVST 632
+ F ++ + L S + +V+DSG +T
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTT 156
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 36.3 bits (80), Expect = 0.028
Identities = 30/90 (33%), Positives = 34/90 (37%)
Frame = +2
Query: 242 PLDRGKAPPSGRDGRYGTXGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGXDLASYLL 421
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 422 Q*AACRPRGTPSPAH*GSPQPQGQQREXDP 511
A P G P PA G+P P G P
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDGNPGTAGP 273
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 36.3 bits (80), Expect = 0.028
Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Frame = +3
Query: 171 LVVXNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGIL 344
L++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 345 TLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFE 524
+E + D+ K EL+V P ++ VLL+ P + I E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 525 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGXGVS 629
+ + Q L LYA TTG+V+D G V+
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERVN 333
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 34.7 bits (76), Expect = 0.084
Identities = 29/86 (33%), Positives = 33/86 (38%)
Frame = +2
Query: 254 GKAPPSGRDGRYGTXGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGXDLASYLLQ*AA 433
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 434 CRPRGTPSPAH*GSPQPQGQQREXDP 511
P G P PA G+P P G P
Sbjct: 251 AGPPGPPGPA--GAPGPDGNPGTAGP 274
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 625 TPSPESSTIPVVRPDAYSESTAWMATYMAGVL 530
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 529 STRPPCTSPSKPCSRCTRPVVPPVSCXTP 615
ST P T+P P S T P VPPV+ TP
Sbjct: 659 STTAP-TAPVNPTSPTTAPTVPPVTTTTP 686
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 529 STRPPCTSPSKPCSRCTRPVVPPVSCXTP 615
ST P T+P P S T P VPPV+ TP
Sbjct: 715 STTAP-TAPVNPTSPTTAPTVPPVTTTTP 742
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 529 STRPPCTSPSKPCSRCTRPVVPPVSCXTP 615
ST P T+P P S T P VPPV+ TP
Sbjct: 538 STTAP-TAPVNPTSPTTAPTVPPVTTTTP 565
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 333 FCSVPHLLHKSPXVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHC 181
FC + H++ + P R D +RG +++H RNRPC C
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPC 444
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 333 FCSVPHLLHKSPXVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHC 181
FC + H++ + P R D +RG +++H RNRPC C
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPC 444
>U64605-8|AAF98602.1| 472|Caenorhabditis elegans Sorting nexin
protein 1 protein.
Length = 472
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 7 QHTQASIALSRDTG-RQSVSVSHG*QS-LQGV*FS-SCHTYILLISLIQDVRRXSCRAW 174
+ T S ALS T ++VS +G Q+ + FS S + YI+LIS ++DV RAW
Sbjct: 306 ESTSLSRALSSLTDVTENVSAVYGKQAEVDNSKFSESIYEYIMLISALKDVFGERVRAW 364
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 514 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC 606
SC C +P PC T P PP+ C
Sbjct: 635 SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPC 665
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 514 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC 606
SC C +P PC T P PP+ C
Sbjct: 280 SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPC 310
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 514 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC 606
SC C +P PC T P PP+ C
Sbjct: 232 SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPC 262
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 514 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC 606
SC C +P PC T P PP+ C
Sbjct: 960 SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPC 990
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 201 KAGFAGDDAPRAVFPSIVGRPRHQG 275
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,597,641
Number of Sequences: 27780
Number of extensions: 402115
Number of successful extensions: 1310
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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