Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_L12
(854 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 6e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 60 3e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 59 4e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 8e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 1e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 3e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 9e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 46 6e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 40 2e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 40 2e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 40 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 1e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.010
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.29
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.3
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 64.9 bits (151), Expect = 9e-13
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Frame = +1
Query: 163 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 336
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 337 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTF 504
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 505 KFGSRMHNXDQMDFVI--DKRIYSM---FESRAWDV 597
KFGS N DQ+ + +K + ++S WD+
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-12
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +1
Query: 115 STRSSQRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW 294
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 295 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 468
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 469 DNWPNDMXTCTFKFGSRMHNXDQMDFVI 552
+P D C KFGS ++ +Q+D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-12
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +1
Query: 115 STRSSQRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW 294
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 295 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 468
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 469 DNWPNDMXTCTFKFGSRMHNXDQMDFVI 552
+P D C KFGS ++ +Q+D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 202 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 375
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDQMDFVI 552
G Y V++NGS ++ + + + +P D C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.1 bits (144), Expect = 6e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 202 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 375
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDQMDFVI 552
G Y V+++GS ++ + M + +P D C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.7 bits (143), Expect = 8e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 202 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 375
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDQMDFVI 552
G Y V+++GS ++ + M + +P D C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 202 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 375
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDQMDFVI 552
G Y V+++GS ++ + + + +P D C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +1
Query: 202 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 375
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDQMDFVI 552
G Y V+++GS ++ + + + +P D C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +1
Query: 202 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 375
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 376 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDQMDFVI 552
G Y V+++GS ++ + + + +P D C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 59.7 bits (138), Expect = 3e-11
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 244 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 417
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 418 VSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDQMD 543
V W + + ++ +P D TC KFGS ++ Q+D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 59.3 bits (137), Expect = 4e-11
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +1
Query: 244 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 408
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 409 NGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSRMHNXDQMD 543
G VSW + + ++ +P D +C KFGS +N Q+D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 572 ILYILLSITKSIWSXLCIL 516
+L+ ++ +T SIW +C+L
Sbjct: 316 LLFTMILVTLSIWITVCVL 334
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.8 bits (136), Expect = 6e-11
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Frame = +1
Query: 148 PPPHSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVS 318
P +I N+T+ L + + S + + + + + W D L W ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 319 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 489
S+ +W PD+ + N+ T G V ++GSVS + + + +WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 490 XTCTFKFGSRMHNXDQMDFVIDKRIYSM 573
C FGS +H+ ++++ +DK+ + M
Sbjct: 181 HRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.4 bits (135), Expect = 8e-11
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +1
Query: 163 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 336
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 337 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFG 513
PD+VL N A A +A + + G V W + + ++ +P D TC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 514 SRMHNXDQMD 543
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.0 bits (134), Expect = 1e-10
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +1
Query: 166 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLW 333
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 334 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKF 510
PD+VL N A G + +A + G V W + + + +P D TC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 511 GSRMHNXDQMD 543
GS ++ Q+D
Sbjct: 164 GSWTYDGIQID 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 58.0 bits (134), Expect = 1e-10
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Frame = +1
Query: 130 QRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTW 309
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 310 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 483
L + RLW+PDV++ N+A G Y V NNG+ ++ + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 484 DMXTCTFKFGSRMHNXDQMDFVIDKR----IYSMFESRAWDV 597
D C KFGS ++ Q+D + I S + WD+
Sbjct: 158 DDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.0 bits (129), Expect = 4e-10
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +1
Query: 163 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 336
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 337 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTF 504
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+ TC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 505 KFGSRMHNXDQMD 543
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.2 bits (122), Expect = 3e-09
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = +1
Query: 133 RTIGTPPPHSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CST 306
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 307 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 474
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 475 WPNDMXTCTFKFGSRMHNXDQMD 543
+P D TC KFGS ++ +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +1
Query: 166 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 342
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 343 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 516
+L N A + VS+ G V W+ + + ++ +P D C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 517 RMHNXDQMD 543
++ Q++
Sbjct: 152 WTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 51.6 bits (118), Expect = 9e-09
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +1
Query: 205 IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 375
I E + T + + +W+D+RL + G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 376 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 516
R+ +G V + RL I M L+N+P D C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.6 bits (108), Expect = 1e-07
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Frame = +1
Query: 148 PPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSE 324
P + ++ L ++H N+ E TV L++ W L W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 325 RLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMX 492
+W PD+V+ + + ++ V N+G++ + TP+ + D+ WP D+
Sbjct: 114 EIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDIL 171
Query: 493 TCTFKFGSRMHNXDQM 540
CT S H +++
Sbjct: 172 NCTIHIASWSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 45.6 bits (103), Expect = 6e-07
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Frame = +1
Query: 151 PPHSK---IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVS 318
P H K VV + +R + E + + + +W D RL + S +
Sbjct: 54 PTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKM 113
Query: 319 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 489
ER+WRPD N + + R+S +G + + RL I M+L N+P D
Sbjct: 114 LERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDR 173
Query: 490 XTCTFKFGS 516
+C GS
Sbjct: 174 QSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 2e-06
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Frame = +1
Query: 169 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLXWN--AGEWGCSTWLVSSERLWRP 339
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 340 DVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKF 510
D+ N + + R+ NGSV + R+ ++ M L +P D C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 511 GSRMHNXDQMDFV 549
S D + F+
Sbjct: 179 ASYGWTTDDLVFL 191
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 115 STRSSQRTIGTPPPHSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAG 288
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 289 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 462
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 463 QLDNWPNDMXTCTFKFGSRMHNXDQMDFV 549
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 40.3 bits (90), Expect = 2e-05
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 115 STRSSQRTIGTPPPHSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAG 288
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 289 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 462
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 463 QLDNWPNDMXTCTFKFGSRMHNXDQMDFV 549
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 40.3 bits (90), Expect = 2e-05
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 115 STRSSQRTIGTPPPHSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAG 288
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 289 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 462
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 463 QLDNWPNDMXTCTFKFGSRMHNXDQMDFV 549
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.9 bits (84), Expect = 1e-04
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +1
Query: 205 IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 384
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 385 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 516
R R+S +GSV++ R + M L +P D CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.003
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +1
Query: 166 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAGEWGCSTWLVSSERLWRP 339
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 340 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFG 513
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 514 SRMHNXDQMDFV 549
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.010
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 322 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMX 492
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 493 TCTFKFGSRMHNXDQMDFVID 555
C + S H D+M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.29
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 166 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLX-----WNAGEWGCSTWLVSSER 327
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 328 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMX 492
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 493 TC 498
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 309 PSAAAPLPCVPXQS 268
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,260
Number of Sequences: 438
Number of extensions: 4826
Number of successful extensions: 75
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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