Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_L09
         (837 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    38   0.012
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    33   0.19 
AF039044-12|AAG24130.2|  405|Caenorhabditis elegans Hypothetical...    33   0.25 
AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical ...    31   1.3  
AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical ...    31   1.3  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    30   2.3  
AF068721-7|AAC19264.1|  531|Caenorhabditis elegans Hypothetical ...    29   5.4  
AF068721-6|AAL00880.1|  564|Caenorhabditis elegans Hypothetical ...    29   5.4  

>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +3

Query: 231 LLGGGISHPRLLSLAQSIPWARK--VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 404
           LL  G  +P+ +    ++P +     + LG+  D+ +TF+PHIK +    +  L R   +
Sbjct: 170 LLHLGKKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQL 226

Query: 405 ICKRSKMSLRNKVTLCKTCIRPVMTYASVVFAHAARTHIDTL 530
           +     +       L KT I P++ Y S V++    + + TL
Sbjct: 227 LKSFKSLCPEFYCNLFKTYILPLIEYGSAVYSPKPSSSLSTL 268


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 10  VNDIPRSPPTHLAL--FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 183
           VNDI    P  +A   FADDT +Y +S  K+     LQSA  A+  W +  ++ +N +K+
Sbjct: 92  VNDISSILPEKVACKQFADDTKLY-ASTPKTESENNLQSALDAVVDWTKGSKLTLNQSKT 150

Query: 184 TAV 192
             V
Sbjct: 151 VHV 153


>AF039044-12|AAG24130.2|  405|Caenorhabditis elegans Hypothetical
           protein F48G7.11 protein.
          Length = 405

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +3

Query: 369 RAAFILGRLYPMICKRSKMSLRNKVTLCKTCIRPVMTYASVVFAHAARTHIDTLQSLQSR 548
           RA     +   M+C+R   SL++++  CK C R  M Y + +  +  +T  D + S  SR
Sbjct: 37  RAVMRSAKSQDMVCERESCSLKDRIQCCKIC-RLKMCYDAGMDPNKFQTGRDLISS-SSR 94

Query: 549 FCRL-AVGAPWFVRN 590
              L +VG+P  + N
Sbjct: 95  SSNLSSVGSPQSLAN 109


>AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical
           protein F18A12.8b protein.
          Length = 816

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 7   VVNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPA 177
           V ND+P+    +L L   D+  YY    KS++  + +     L + F K   DI+PA
Sbjct: 583 VTNDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISPA 638


>AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical
           protein F18A12.8a protein.
          Length = 848

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 7   VVNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPA 177
           V ND+P+    +L L   D+  YY    KS++  + +     L + F K   DI+PA
Sbjct: 583 VTNDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISPA 638


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/63 (23%), Positives = 31/63 (49%)
 Frame = +1

Query: 10  VNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 189
           + D+P    T L  +ADD ++    +     A+K+Q     + ++ ++  + I+  KST 
Sbjct: 548 LKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTV 607

Query: 190 VLF 198
            +F
Sbjct: 608 TVF 610


>AF068721-7|AAC19264.1|  531|Caenorhabditis elegans Hypothetical
           protein ZK1055.6a protein.
          Length = 531

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 141 VVPKMAHRHQPSEKYCGALSEGKLHTDFLPLLGGGIS 251
           ++P + H+  PS+     L+   ++T  LPLL G  S
Sbjct: 335 LIPSLLHQSVPSKNASALLTASAVNTSVLPLLSGETS 371


>AF068721-6|AAL00880.1|  564|Caenorhabditis elegans Hypothetical
           protein ZK1055.6b protein.
          Length = 564

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 141 VVPKMAHRHQPSEKYCGALSEGKLHTDFLPLLGGGIS 251
           ++P + H+  PS+     L+   ++T  LPLL G  S
Sbjct: 368 LIPSLLHQSVPSKNASALLTASAVNTSVLPLLSGETS 404


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,820,985
Number of Sequences: 27780
Number of extensions: 442780
Number of successful extensions: 1095
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)