Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_L06
(846 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 336 3e-92
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 336 3e-92
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 336 3e-92
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 324 7e-89
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 324 7e-89
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 225 8e-59
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 3e-53
AY071423-1|AAL49045.1| 330|Drosophila melanogaster RE50471p pro... 29 8.0
AY069272-1|AAL39417.1| 331|Drosophila melanogaster GM09977p pro... 29 8.0
AE014296-1353|AAF50499.1| 331|Drosophila melanogaster CG8209-PA... 29 8.0
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 336 bits (825), Expect = 3e-92
Identities = 148/200 (74%), Positives = 167/200 (83%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 76
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 77 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 136
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 588
W D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQL
Sbjct: 137 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 196
Query: 589 NGGTIEDKVKWAXXHLEKPI 648
NGG+IEDKVKWA HLEKPI
Sbjct: 197 NGGSIEDKVKWAREHLEKPI 216
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRVS TV RAG
Sbjct: 249 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 281
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 659 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
+VF QDEMIDC+ SRWHTKKLPR
Sbjct: 220 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 253
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 336 bits (825), Expect = 3e-92
Identities = 148/200 (74%), Positives = 167/200 (83%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 588
W D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 589 NGGTIEDKVKWAXXHLEKPI 648
NGG+IEDKVKWA HLEKPI
Sbjct: 186 NGGSIEDKVKWAREHLEKPI 205
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRVS TV RAG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 270
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 659 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
+VF QDEMIDC+ SRWHTKKLPR
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 242
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 336 bits (825), Expect = 3e-92
Identities = 148/200 (74%), Positives = 167/200 (83%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 588
W D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 589 NGGTIEDKVKWAXXHLEKPI 648
NGG+IEDKVKWA HLEKPI
Sbjct: 186 NGGSIEDKVKWAREHLEKPI 205
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRVS TV RAG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 270
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 659 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
+VF QDEMIDC+ SRWHTKKLPR
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 242
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 324 bits (797), Expect = 7e-89
Identities = 143/192 (74%), Positives = 162/192 (84%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 432
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 433 XXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 612
W D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 613 VKWAXXHLEKPI 648
VKWA HLEKPI
Sbjct: 181 VKWAREHLEKPI 192
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRVS TV RAG
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 257
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 659 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
+VF QDEMIDC+ SRWHTKKLPR
Sbjct: 196 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 229
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 324 bits (797), Expect = 7e-89
Identities = 143/192 (74%), Positives = 162/192 (84%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 432
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 433 XXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 612
W D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 613 VKWAXXHLEKPI 648
VKWA HLEKPI
Sbjct: 181 VKWAREHLEKPI 192
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRVS TV RAG
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAG 257
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 659 SVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
+VF QDEMIDC+ SRWHTKKLPR
Sbjct: 196 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 229
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 225 bits (549), Expect = 8e-59
Identities = 97/118 (82%), Positives = 106/118 (89%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 402
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 3e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
>AY071423-1|AAL49045.1| 330|Drosophila melanogaster RE50471p
protein.
Length = 330
Score = 29.1 bits (62), Expect = 8.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 529 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAXXHLEKPIPXR 657
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
>AY069272-1|AAL39417.1| 331|Drosophila melanogaster GM09977p
protein.
Length = 331
Score = 29.1 bits (62), Expect = 8.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 529 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAXXHLEKPIPXR 657
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
>AE014296-1353|AAF50499.1| 331|Drosophila melanogaster CG8209-PA
protein.
Length = 331
Score = 29.1 bits (62), Expect = 8.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 529 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAXXHLEKPIPXR 657
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,011,530
Number of Sequences: 53049
Number of extensions: 773339
Number of successful extensions: 1531
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -