Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_L06
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 298 4e-81
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 298 4e-81
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 298 4e-81
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 298 4e-81
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 241 4e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 241 4e-64
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 104 9e-23
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 104 9e-23
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 298 bits (731), Expect = 4e-81
Identities = 130/200 (65%), Positives = 157/200 (78%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 588
WQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 589 NGGTIEDKVKWAXXHLEKPI 648
NGGTIE KV WA HLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRV+FTV RAG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 270
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +2
Query: 656 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
D+VFAQDEMID I SRWHTKKLPR
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 298 bits (731), Expect = 4e-81
Identities = 130/200 (65%), Positives = 157/200 (78%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 588
WQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 589 NGGTIEDKVKWAXXHLEKPI 648
NGGTIE KV WA HLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRV+FTV RAG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 270
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +2
Query: 656 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
D+VFAQDEMID I SRWHTKKLPR
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 298 bits (731), Expect = 4e-81
Identities = 130/200 (65%), Positives = 157/200 (78%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 588
WQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 589 NGGTIEDKVKWAXXHLEKPI 648
NGGTIE KV WA HLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRV+FTV RAG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 270
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +2
Query: 656 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
D+VFAQDEMID I SRWHTKKLPR
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 298 bits (731), Expect = 4e-81
Identities = 130/200 (65%), Positives = 157/200 (78%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 588
WQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 589 NGGTIEDKVKWAXXHLEKPI 648
NGGTIE KV WA HLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRV+FTV RAG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 270
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +2
Query: 656 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
D+VFAQDEMID I SRWHTKKLPR
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (590), Expect = 4e-64
Identities = 105/163 (64%), Positives = 125/163 (76%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 537
WQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRV+FTV RAG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 222
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 662 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
V A +MID I SRWHTKKLPR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPR 194
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (590), Expect = 4e-64
Identities = 105/163 (64%), Positives = 125/163 (76%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 409 XXXXXXXXXXXWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 537
WQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRV+FTV RAG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 222
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 662 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
V A +MID I SRWHTKKLPR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPR 194
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 104 bits (249), Expect = 9e-23
Identities = 45/69 (65%), Positives = 56/69 (81%)
Frame = +1
Query: 442 WQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 621
WQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 622 AXXHLEKPI 648
A HLEK +
Sbjct: 99 AREHLEKQV 107
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRV+FTV RAG
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 172
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 135
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +2
Query: 656 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
D+VFAQDEMID I SRWHTKKLPR
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 104 bits (249), Expect = 9e-23
Identities = 45/69 (65%), Positives = 56/69 (81%)
Frame = +1
Query: 442 WQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 621
WQDE G+K I DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 622 AXXHLEKPI 648
A HLEK +
Sbjct: 99 AREHLEKQV 107
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 747 RNYPVXXHXGLXKVACIGXWHPSRVSFTVXRAG 845
+ P H GL KVACIG WHPSRV+FTV RAG
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 172
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 135
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +2
Query: 656 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPR 760
D+VFAQDEMID I SRWHTKKLPR
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 274 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 402
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 255 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 422
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,775,959
Number of Sequences: 27780
Number of extensions: 387594
Number of successful extensions: 910
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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