Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_L05
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 315 3e-86
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 315 3e-86
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 315 3e-86
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 315 3e-86
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 254 8e-68
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 254 8e-68
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 118 7e-27
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 118 7e-27
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 315 bits (773), Expect = 3e-86
Identities = 147/254 (57%), Positives = 177/254 (69%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVGVIAHTQMKLLKQRQXKAHIMEIQL 589
KAFTK KWQDE G+K I DF + +YCS + VIAHTQMK+L++RQ KAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIDDKVKWATXHLEKPIPXRFCVCPX*ND*LHWCHQGQRIQRCHFSLAHKEXTRXTH 769
NGGTI+ KV WA HLEK + +G + K+ R TH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 770 XGLXKXACXGAXXP 811
GL K AC GA P
Sbjct: 246 KGLRKVACIGAWHP 259
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 657 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLP 758
D+VFAQ EMID I SRWHTK LP
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 315 bits (773), Expect = 3e-86
Identities = 147/254 (57%), Positives = 177/254 (69%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVGVIAHTQMKLLKQRQXKAHIMEIQL 589
KAFTK KWQDE G+K I DF + +YCS + VIAHTQMK+L++RQ KAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIDDKVKWATXHLEKPIPXRFCVCPX*ND*LHWCHQGQRIQRCHFSLAHKEXTRXTH 769
NGGTI+ KV WA HLEK + +G + K+ R TH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 770 XGLXKXACXGAXXP 811
GL K AC GA P
Sbjct: 246 KGLRKVACIGAWHP 259
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 657 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLP 758
D+VFAQ EMID I SRWHTK LP
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 315 bits (773), Expect = 3e-86
Identities = 147/254 (57%), Positives = 177/254 (69%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVGVIAHTQMKLLKQRQXKAHIMEIQL 589
KAFTK KWQDE G+K I DF + +YCS + VIAHTQMK+L++RQ KAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIDDKVKWATXHLEKPIPXRFCVCPX*ND*LHWCHQGQRIQRCHFSLAHKEXTRXTH 769
NGGTI+ KV WA HLEK + +G + K+ R TH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 770 XGLXKXACXGAXXP 811
GL K AC GA P
Sbjct: 246 KGLRKVACIGAWHP 259
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 657 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLP 758
D+VFAQ EMID I SRWHTK LP
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 315 bits (773), Expect = 3e-86
Identities = 147/254 (57%), Positives = 177/254 (69%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVGVIAHTQMKLLKQRQXKAHIMEIQL 589
KAFTK KWQDE G+K I DF + +YCS + VIAHTQMK+L++RQ KAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIDDKVKWATXHLEKPIPXRFCVCPX*ND*LHWCHQGQRIQRCHFSLAHKEXTRXTH 769
NGGTI+ KV WA HLEK + +G + K+ R TH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 770 XGLXKXACXGAXXP 811
GL K AC GA P
Sbjct: 246 KGLRKVACIGAWHP 259
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 657 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLP 758
D+VFAQ EMID I SRWHTK LP
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 254 bits (621), Expect = 8e-68
Identities = 111/163 (68%), Positives = 130/163 (79%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVGVIAHTQM 538
KAFTK KWQDE G+K I DF + +YCS + VIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 663 VFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLP 758
V A +MID I SRWHTK LP
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLP 193
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 746 KEXTRXTHXGLXKXACXGAXXP 811
K+ R TH GL K AC GA P
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHP 211
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 254 bits (621), Expect = 8e-68
Identities = 111/163 (68%), Positives = 130/163 (79%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVGVIAHTQM 538
KAFTK KWQDE G+K I DF + +YCS + VIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 663 VFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLP 758
V A +MID I SRWHTK LP
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLP 193
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 746 KEXTRXTHXGLXKXACXGAXXP 811
K+ R TH GL K AC GA P
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHP 211
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 118 bits (283), Expect = 7e-27
Identities = 62/137 (45%), Positives = 78/137 (56%)
Frame = +2
Query: 401 YKCXXKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVGVIAHTQMKLLKQRQXKAHIME 580
Y+ KAFTK KWQDE G+K I DF + +YCS + VIAHTQMK+L++RQ KAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 581 IQLNGGTIDDKVKWATXHLEKPIPXRFCVCPX*ND*LHWCHQGQRIQRCHFSLAHKEXTR 760
IQ+NGGTI+ KV WA HLEK + +G + K+ R
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 761 XTHXGLXKXACXGAXXP 811
TH GL K AC GA P
Sbjct: 145 KTHKGLRKVACIGAWHP 161
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 657 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLP 758
D+VFAQ EMID I SRWHTK LP
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 143
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 118 bits (283), Expect = 7e-27
Identities = 62/137 (45%), Positives = 78/137 (56%)
Frame = +2
Query: 401 YKCXXKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVGVIAHTQMKLLKQRQXKAHIME 580
Y+ KAFTK KWQDE G+K I DF + +YCS + VIAHTQMK+L++RQ KAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 581 IQLNGGTIDDKVKWATXHLEKPIPXRFCVCPX*ND*LHWCHQGQRIQRCHFSLAHKEXTR 760
IQ+NGGTI+ KV WA HLEK + +G + K+ R
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 761 XTHXGLXKXACXGAXXP 811
TH GL K AC GA P
Sbjct: 145 KTHKGLRKVACIGAWHP 161
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 657 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTKXLP 758
D+VFAQ EMID I SRWHTK LP
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 143
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 275 TPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWY 403
T P + GY+ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,354,142
Number of Sequences: 27780
Number of extensions: 340058
Number of successful extensions: 675
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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