Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_L04
(861 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 8e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 43 4e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 6e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 42 6e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 1e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 41 1e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 40 3e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 35 8e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 33 0.003
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.004
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 32 0.008
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 32 0.008
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 32 0.008
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.018
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 30 0.024
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 30 0.024
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 30 0.024
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.90
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 1.6
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 6.3
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.2 bits (102), Expect = 8e-07
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
+ RLW+PDV++ N+A G Y V NNG+ + + + + +P
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 583 QTCTFKFGSRMHNSDQMDFVI*Q----XIYSMFXSGAWD 687
Q C KFGS ++ Q+D + I S +G WD
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWD 198
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +3
Query: 519 HKALGH*HSNFYAVRQXAQXHA 584
H +GH HS+ +A HA
Sbjct: 416 HHTMGHGHSHIHATPHHHHSHA 437
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 44.8 bits (101), Expect = 1e-06
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Frame = +1
Query: 415 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 583 QTCTFKFGSRMHNSDQMDFVI*Q-----XIYSMFXSGAWD 687
QTC KFGS N DQ+ + + + SG WD
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWD 202
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNA---GGMGLQHL 401
N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
++ +LW+PD+++ N+A G Y V++NGS + + + + +P
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 583 QTCTFKFGSRMHNSDQMDFVI 645
Q C KFGS ++ +Q+D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNAGGMG 389
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
++ +LW+PD+++ N+A G Y V++NGS + + + + +P
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 583 QTCTFKFGSRMHNSDQMDFVI 645
Q C KFGS ++ +Q+D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNAGGMG 389
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
++ +LW+PD+++ N+A G Y V++NGS + + + + +P
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 583 QTCTFKFGSRMHNSDQMDFVI 645
Q C KFGS ++ +Q+D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNAGGMG 389
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
++ +LW+PD+++ N+A G Y V+++GS + + M + +P
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 583 QTCTFKFGSRMHNSDQMDFVI 645
Q C KFGS ++ +Q+D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNAGGMG 389
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
++ +LW+PD+++ N+A G Y V+++GS + + M + +P
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 583 QTCTFKFGSRMHNSDQMDFVI 645
Q C KFGS ++ +Q+D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNAGGMG 389
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 42.7 bits (96), Expect = 4e-06
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPN 576
V S+ +W PD+ + N+ T G V ++GSVSC+ + + WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 577 XMQTCTFKFGSRMHNSDQMDFVI 645
C FGS +H+ ++++ +
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFL 201
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 42.3 bits (95), Expect = 6e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
++ +LW+PD+++ N+A G Y V+++GS + + + + +P
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 583 QTCTFKFGSRMHNSDQMDFVI 645
Q C KFGS ++ +Q+D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNAGGMG 389
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 42.3 bits (95), Expect = 6e-06
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
V S+ +WRPD+VL NA A +A ++ G V + + ++ +P
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 583 QTCTFKFGSRMHNSDQMD 636
QTC KFGS ++ Q+D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
++ +LW+PD+++ N+A G Y V+++GS + + + + +P
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 583 QTCTFKFGSRMHNSDQMDFVI 645
Q C KFGS ++ +Q+D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNAGGMG 389
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
++ +LW+PD+++ N+A G Y V+++GS + + + + +P
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 583 QTCTFKFGSRMHNSDQMDFVI 645
Q C KFGS ++ +Q+D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 294 NIRESESTVRIPADLQMNWIDKRLXWNAGGMG 389
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 41.5 bits (93), Expect = 1e-05
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +1
Query: 388 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLDISTPISM 555
G V SE +W PD+VL N A G+Y + +A + G VS + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 556 QLDXWPNXMQTCTFKFGSRMHNSDQMD 636
++ +P Q+C KFGS +N Q+D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.1 bits (92), Expect = 1e-05
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 406 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
V S+ +WRPD+VL NA A +A + + G V + + ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 583 QTCTFKFGSRMHNSDQMD 636
QTC KFGS ++ ++D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 39.9 bits (89), Expect = 3e-05
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 382 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSCIKRLDISTPISM 555
E+G T L V SE +W PD+VL N A G + +A + G V + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 556 QLDXWPNXMQTCTFKFGSRMHNSDQMD 636
+ +P QTC KFGS ++ Q+D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLDISTPISMQLDXWP 573
V S+ +WRPD+VL N A G+Y + +A V +G V + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 574 NXMQTCTFKFGSRMHNSDQMD 636
+QTC K GS ++ ++D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 35.9 bits (79), Expect = 5e-04
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +1
Query: 388 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLDISTPISM 555
G T V SE +W PD+VL N A G+Y + +A + + G V + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 556 QLDXWPNXMQTCTFKFGSRMHNSDQMD 636
++ +P QTC KFGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 35.1 bits (77), Expect = 8e-04
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 415 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMQLDXWPNXMQ 585
ER+WRPD N + + R+S +G + RL I M+L +P Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 586 TCTFKFGS 609
+C GS
Sbjct: 175 SCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.003
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSCIKRLDISTPISMQLDXWPNX 579
V R+WRPD +L N A + VS+ G V + + + ++ +P
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 580 MQTCTFKFGSRMHNSDQMD 636
Q C K+ S ++ Q++
Sbjct: 142 EQRCVLKWASWTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.004
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +1
Query: 418 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSCIKRLDISTPISMQLDXWPNXMQT 588
R+W+PD N + T R+ +G V RL I M L+ +P Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 589 CTFKFGS 609
C +FGS
Sbjct: 144 CPLQFGS 150
Score = 31.1 bits (67), Expect = 0.014
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 183 NATSLSLMIDSLLATYDRESPPD---SKIVXNLTLHLRHAN-IRESESTVRIPADLQMNW 350
N +++S ++D+LL YD PD + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 351 IDKRLXWNAG 380
+D+RL + G
Sbjct: 62 VDRRLAFQGG 71
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.004
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +1
Query: 406 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSCIKRLDISTPISMQLDXWPN 576
V S +W PD+V+ ++ + D ++ V N+G++ C+ + WP
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPY 168
Query: 577 XMQTCTFKFGSRMHNSDQM 633
+ CT S H S+++
Sbjct: 169 DILNCTIHIASWSHGSNEI 187
Score = 32.3 bits (70), Expect = 0.006
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 177 CENATSLSLMIDS---LLATYDRESPPDSKIVXNLT--LHLRHANIRESESTVRIPADLQ 341
C++ TS S + L YDR+ P+ K + L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 342 MNWIDKRLXWNA 377
+ W L W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.008
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 403 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMQLDXWP 573
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 574 NXMQTCTFKFGSRMHNSDQMDFV 642
Q C+ + S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 28.3 bits (60), Expect = 0.096
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = +3
Query: 126 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVXNLTLHLR 287
++LL FLL + + + ++D++L YD E+ D V + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 288 H-ANIRESESTVRIPADLQMNWIDKRLXWNAGGMGLQHL 401
+ I + + + W+D+RL +N G L++L
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.008
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 403 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMQLDXWP 573
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 574 NXMQTCTFKFGSRMHNSDQMDFV 642
Q C+ + S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 31.1 bits (67), Expect = 0.014
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Frame = +3
Query: 126 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVXNLTLHLR 287
++LL FLL + + + ++D++L YD E+ D + + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 288 H-ANIRESESTVRIPADLQMNWIDKRLXWNAGGMGLQHL 401
A I + + + + W+D+RL +N G L++L
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 31.9 bits (69), Expect = 0.008
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 412 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMQLDXWPNXM 582
+E++W PD N + D R R+S +GSV+ R + M L +P
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 583 QTCTFKFGS 609
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.7 bits (66), Expect = 0.018
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 415 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSCIKRLDISTPISMQLDXWPNXMQ 585
+ +WRPD NA + T + + + ++ + +L + +M +P+ Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 586 TCTFKFGSRMHNSDQMDF 639
C + S H +D+M F
Sbjct: 176 ECKLQMESLSHTTDEMIF 193
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.3 bits (65), Expect = 0.024
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +1
Query: 388 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSCIKRLDIS 540
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 541 TPISMQLDXWPNXMQTCTFKFGS 609
M L +P Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
Score = 21.8 bits (44), Expect = 8.4
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 183 NATSLSLMIDSLLATYDRESPPD---SKIVXNLTLH-LRHANIRESESTVRIPADLQMNW 350
N ++S ++DS +YD+ P+ + +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 351 IDKRL 365
D RL
Sbjct: 68 TDPRL 72
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.3 bits (65), Expect = 0.024
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +1
Query: 388 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSCIKRLDIS 540
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 541 TPISMQLDXWPNXMQTCTFKFGS 609
M L +P Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 30.3 bits (65), Expect = 0.024
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +1
Query: 388 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSCIKRLDIS 540
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 541 TPISMQLDXWPNXMQTCTFKFGS 609
M L +P Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.9 bits (59), Expect = 0.13
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 421 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSCIKRLDISTPISMQLDXWPNXMQTC 591
+W P V + N ++A T + + + +G V RL + ++L+ +P +Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 592 TFKFGSRMHN 621
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.90
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 123 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 227
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.2 bits (50), Expect = 1.6
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = +1
Query: 415 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSCIKRLDISTPISMQLDXWPNX 579
+ LW+PD LNA + AL + S+ N +V R+ M+ +P
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 580 MQTCTFKFGSRMHNSDQM 633
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 6.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 9 VSNGRGFGGREQKGSTIWCFKFTRDSFN*ISCHKMS 116
VS+ G GGR + W F D +S HK++
Sbjct: 98 VSDKTGNGGRLLQPYPDWSFAKYEDCSGIVSAHKIA 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,019
Number of Sequences: 438
Number of extensions: 5151
Number of successful extensions: 72
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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