Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_K23
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 254 4e-68
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 0.79
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 30 1.8
Z93379-2|CAB07592.1| 170|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z67880-1|CAA91794.1| 256|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 28 9.7
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 254 bits (623), Expect = 4e-68
Identities = 126/255 (49%), Positives = 159/255 (62%), Gaps = 2/255 (0%)
Frame = +2
Query: 74 LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 247
+E+ + L G L+E RI +GR L+ SSI + A+ EQ
Sbjct: 11 VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67
Query: 248 TRPPXIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 427
TR P +V+V IQ+ I PT V EQ+ AI +V +I+ A G N+I QE W MPF
Sbjct: 68 TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127
Query: 428 AFCTRGKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILXRDXKHSDILWNTAVVIS 607
AFCTR + PW EFAES GPTT FL +LA+K+ +VI+S IL RD + D++WNTAVVIS
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187
Query: 608 DTGNVIGKHRKNHIPESRRFNESNYYMEGNTGHPVFATRYRKIAVNXCFGRHHVLNWMMF 787
TG VIG+ RKNHIP FNES YYME GHPVF T+Y +I +N C+GRHH NWMM+
Sbjct: 188 HTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICYGRHHPQNWMMY 247
Query: 788 GXNGPEIVFNPSPTI 832
NG EI+FNPS T+
Sbjct: 248 ALNGAEIIFNPSATV 262
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 624 SGSIARTTFPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
S S+ TT R L T+T VT +I + P+T S T S+GTT
Sbjct: 572 STSVFNTT-ARSSSLPGSTSTMSVTTSIASTSPETTSSTVTGTSEGTT 618
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/100 (26%), Positives = 39/100 (39%)
Frame = +3
Query: 468 PNQLKTGRPRPSFGNSPSSTQW*SCPRYXKGTXSIRTYFGTLRLSLVTPET*SGSIARTT 647
P +K+ P+ + ST + P K T + T T++ + TP T + + T
Sbjct: 266 PTTMKSTPTTPTTPTTMKSTP--TTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 323
Query: 648 FPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
P T T TP + S P T + T S TT
Sbjct: 324 TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 363
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/100 (26%), Positives = 39/100 (39%)
Frame = +3
Query: 468 PNQLKTGRPRPSFGNSPSSTQW*SCPRYXKGTXSIRTYFGTLRLSLVTPET*SGSIARTT 647
P +K+ P+ S +T + P K T + T T++ + TP T + + T
Sbjct: 165 PTTIKSTPTTPTTMKSTPTTP--TTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 222
Query: 648 FPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
P T T TP + S P T + T S TT
Sbjct: 223 TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 262
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/100 (26%), Positives = 39/100 (39%)
Frame = +3
Query: 468 PNQLKTGRPRPSFGNSPSSTQW*SCPRYXKGTXSIRTYFGTLRLSLVTPET*SGSIARTT 647
P +K+ P+ S +T + P K T + T T++ + TP T + + T
Sbjct: 279 PTTMKSTPTTPTTMKSTPTTP--TTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 336
Query: 648 FPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
P T T TP + S P T + T S TT
Sbjct: 337 TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 376
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 468 PNQLKTGRPRPSFGNSPSSTQW*-SCPRYXKGTXSIRTYFGTLRLSLVTPET*SGSIART 644
P +K+ P+ + ST + P K T + T T++ + TP T + +
Sbjct: 175 PTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTP 234
Query: 645 TFPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
T P T T TP + S P T + T S TT
Sbjct: 235 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 275
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 468 PNQLKTGRPRPSFGNSPSSTQW*-SCPRYXKGTXSIRTYFGTLRLSLVTPET*SGSIART 644
P +K+ P+ + ST + P K T + T T++ + TP T + +
Sbjct: 188 PTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTP 247
Query: 645 TFPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
T P T T TP + S P T + T S TT
Sbjct: 248 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 288
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 468 PNQLKTGRPRPSFGNSPSSTQW*-SCPRYXKGTXSIRTYFGTLRLSLVTPET*SGSIART 644
P +K+ P+ + ST + P K T + T T++ + TP T + +
Sbjct: 289 PTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTP 348
Query: 645 TFPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
T P T T TP + S P T + T S TT
Sbjct: 349 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 389
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 468 PNQLKTGRPRPSFGNSPSSTQW*-SCPRYXKGTXSIRTYFGTLRLSLVTPET*SGSIART 644
P +K+ P+ + ST + P K T + T T++ + TP T + +
Sbjct: 302 PTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTP 361
Query: 645 TFPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
T P T T TP + S P T + T S TT
Sbjct: 362 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 402
>Z93379-2|CAB07592.1| 170|Caenorhabditis elegans Hypothetical
protein F21H7.3 protein.
Length = 170
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 332 KAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTRG 445
K +FNKVKK+++ Q+G F+ W + + G
Sbjct: 58 KILFNKVKKLMEDVPQDGRKKNWFENFWWISIKYALEG 95
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 609 TPET*SG-SIARTTFPRVGDLTNPTTTWKVTPAILYSRPDTARSR*TXASDGTT 767
TP T S S TT P T PTTT T + P T S T + TT
Sbjct: 64 TPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTT 117
>Z67880-1|CAA91794.1| 256|Caenorhabditis elegans Hypothetical
protein C34E7.3 protein.
Length = 256
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = -2
Query: 510 SRRKVVVGPSSADSANSHHGCFPLVQNAKGIFHNSWKQMMLTPSWPATS 364
SR K+ +S+ + HG + +V+ AK F + +++ +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 332 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTRGKQPWCEF 466
K +F+ ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 332 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTRGKQPWCEF 466
K +F+ ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/89 (24%), Positives = 35/89 (39%)
Frame = +2
Query: 89 NNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKDEQTRPPXIV 268
N NL+ ++L+E R + K KES P K+E+ V
Sbjct: 14 NKNLSKKELQELKR-----KQQKSKKKKESKKRAKATKQAEIETREEPKKEEENGDDLDV 68
Query: 269 KVGIIQHSIAVPTDRPVNEQKKAIFNKVK 355
++ I +I + D P + AIF+ K
Sbjct: 69 EIDYIGETIEIEPDNPHAQYFSAIFDAFK 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,811,848
Number of Sequences: 27780
Number of extensions: 389663
Number of successful extensions: 1059
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -