Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_K19
         (962 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0513 - 22864657-22867899                                         29   7.3  
01_01_1212 + 9763949-9764412,9765183-9765252,9765356-9765457           29   7.3  

>01_05_0513 - 22864657-22867899
          Length = 1080

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 662 KXNFFLXXXPPXXXNPPPGGGXXKXPPP 579
           K  ++    PP    PP GGG    PPP
Sbjct: 156 KIYYYDEAPPPPEDRPPEGGGGDNAPPP 183


>01_01_1212 + 9763949-9764412,9765183-9765252,9765356-9765457
          Length = 211

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 574 KKGGGXFXXPPPGGGXXXXGG 636
           ++GGG +  PPPGGG     G
Sbjct: 112 RRGGGTWRRPPPGGGGAASAG 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,704,430
Number of Sequences: 37544
Number of extensions: 157297
Number of successful extensions: 809
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2788108120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)