Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_K16
         (860 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    40   0.003
Z81069-6|CAB02993.1|  237|Caenorhabditis elegans Hypothetical pr...    32   0.46 
Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U43375-6|AAA83623.2|  515|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF067211-3|ABC71845.1|  720|Caenorhabditis elegans Hypothetical ...    28   7.4  
AF067211-2|AAC16990.3|  745|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    28   9.8  
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    28   9.8  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    28   9.8  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    28   9.8  
AC006830-8|ABA00186.1|  289|Caenorhabditis elegans Hypothetical ...    28   9.8  

>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 24/84 (28%), Positives = 40/84 (47%)
 Frame = +2

Query: 119 KILXIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPK 298
           K++   P E  AF CK+V  +QL  + +AL  +       +   + FEKAY  YR +   
Sbjct: 34  KLIRKYPKETFAFKCKLVAQIQLSQYADALELIRKTPAHQM-GHVGFEKAYIHYRQDELD 92

Query: 299 EALQTVDSAPAVDTCFKGIKGSNF 370
           EA++ +++    D     +K   F
Sbjct: 93  EAIKELNTCDKDDVKALELKAQVF 116



 Score = 35.1 bits (77), Expect = 0.065
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 351 ELRAQILYRLXQYQDCYNLYRDLLXNTTDEYEHERK 458
           EL+AQ+ Y+   YQ  Y++Y  LL N +D+ +  R+
Sbjct: 110 ELKAQVFYKQENYQQAYDIYLYLLKNHSDDSDELRR 145


>Z81069-6|CAB02993.1|  237|Caenorhabditis elegans Hypothetical
           protein F25H9.6 protein.
          Length = 237

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 14/62 (22%), Positives = 32/62 (51%)
 Frame = -3

Query: 471 RPCWLSSHVHTHQWCXSVDHGINCSSLGIXXSGIKFEPLIPLKQVSTAGALSTVCSASLG 292
           +PC+ +  ++TH W    ++ +      +  S +KF+ + P+++    G + T   AS+G
Sbjct: 161 KPCYFAPAMNTHMW----ENPLTMQHRTVLKSQLKFKEICPIQKELICGDVGTGAMASIG 216

Query: 291 EL 286
            +
Sbjct: 217 TI 218


>Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical
           protein C06H2.7 protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +2

Query: 179 LQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPK-EALQTVDSAPAVDTCFKGI 355
           L +  F E +AT+ N K+  +   LLF +    +RLN  +  A  T  S P +  C    
Sbjct: 197 LNIGKFDEMVATVNNIKDLRIRQQLLFFQLITIFRLNIARINASVTAASLPLIVECINEW 256

Query: 356 KGS 364
           + S
Sbjct: 257 RAS 259


>U43375-6|AAA83623.2|  515|Caenorhabditis elegans Hypothetical
           protein K09C4.5 protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -3

Query: 474 QRPCWLSSHVHTHQWCXSVD--HGINCSSLGIXXSGIKFEPLIPLKQVSTAGALSTVCSA 301
           + P WL       +   +++  HG NC    +  S IK + L    Q+S   AL  +CS 
Sbjct: 207 ESPKWLVRQNKIEEASRAIEFYHGENCCLNEVVSSYIKEKNLTQEDQISLRQALKVLCSV 266

Query: 300 SL 295
           SL
Sbjct: 267 SL 268


>AF067211-3|ABC71845.1|  720|Caenorhabditis elegans Hypothetical
           protein B0205.1b protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 179 LQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPKEALQTVDSAPAVDTCFKGI 355
           + +HNF  +L  +  +  S    DL+ E    + R N   E L      PA+ TCF GI
Sbjct: 591 ISVHNFLISLELILTSLESDTLIDLMREIKELRNRTND--EILPPDLVIPALQTCFMGI 647


>AF067211-2|AAC16990.3|  745|Caenorhabditis elegans Hypothetical
           protein B0205.1a protein.
          Length = 745

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 179 LQLHNFKEALATLTNAKNSALAADLLFEKAYAQYRLNSPKEALQTVDSAPAVDTCFKGI 355
           + +HNF  +L  +  +  S    DL+ E    + R N   E L      PA+ TCF GI
Sbjct: 616 ISVHNFLISLELILTSLESDTLIDLMREIKELRNRTND--EILPPDLVIPALQTCFMGI 672


>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical protein
            F36H2.1c protein.
          Length = 1071

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 242  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLXAVF 120
            +T+++WHW MLL    S G+   S+ L ++      VL  VF
Sbjct: 996  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1037


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical protein
            F36H2.1b protein.
          Length = 1035

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 242  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLXAVF 120
            +T+++WHW MLL    S G+   S+ L ++      VL  VF
Sbjct: 960  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1001


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical protein
            F36H2.1a protein.
          Length = 1074

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 242  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLXAVF 120
            +T+++WHW MLL    S G+   S+ L ++      VL  VF
Sbjct: 999  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1040


>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical protein
            F02C9.3 protein.
          Length = 1064

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 242  LTLNSWHWLMLLEPP*SCGV 183
            LT+++WHWLML+    S G+
Sbjct: 989  LTVHTWHWLMLVAQALSLGL 1008


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
            protein F36H2.1c protein.
          Length = 1071

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 242  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLXAVF 120
            +T+++WHW MLL    S G+   S+ L ++      VL  VF
Sbjct: 996  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1037


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
            protein F36H2.1b protein.
          Length = 1035

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 242  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLXAVF 120
            +T+++WHW MLL    S G+   S+ L ++      VL  VF
Sbjct: 960  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1001


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
            protein F36H2.1a protein.
          Length = 1074

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 242  LTLNSWHWLMLLEPP*SCGVGE-SIPLCNEMLSAHLVLXAVF 120
            +T+++WHW MLL    S G+   S+ L ++      VL  VF
Sbjct: 999  MTVHTWHWAMLLAQALSLGLYMISLILFDQYFDRQFVLSWVF 1040


>AC006830-8|ABA00186.1|  289|Caenorhabditis elegans Hypothetical
           protein ZK105.8 protein.
          Length = 289

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -2

Query: 166 FAMKCFLLIWCYXQYFALQLLKLFHSHCSGKIYLIQDKPEARLFSLLADIFL 11
           F +  F+L      YF  Q+L + H H          K  + +FSL+A +F+
Sbjct: 177 FMIFTFVLYCSLILYFYFQILYMLHGHRKFMAAKTYSKHISAMFSLVAQLFV 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,820,503
Number of Sequences: 27780
Number of extensions: 247019
Number of successful extensions: 658
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)