Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_K08
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    43   3e-04
03_03_0009 - 13691820-13691900,13693576-13693719                       42   8e-04
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    33   0.002
05_03_0389 - 13409848-13409964,13410049-13410114,13410209-134103...    29   4.8  

>08_01_0003 +
           30085-30195,30289-30365,31080-31136,31668-33560,
           33643-34147,34250-34358,34436-34548,34619-34806,
           35481-36129,36169-36691,36760-36911,37042-37141,
           37301-37416
          Length = 1530

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
 Frame = +1

Query: 151 GDFIFAKVKGYPAWPARVQRLNG-------KKYFVYFYGTGEI 258
           GD + AKVKGYP WPA+V +          +K FV F+GT EI
Sbjct: 21  GDLVLAKVKGYPPWPAKVSKPEDWDQMPVPRKVFVVFFGTREI 63


>03_03_0009 - 13691820-13691900,13693576-13693719
          Length = 74

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
 Frame = +1

Query: 151 GDFIFAKVKGYPAWPARV-------QRLNGKKYFVYFYGTGEI 258
           GD + AK+KG+PAWPA +       Q    KK  VYFYGT ++
Sbjct: 32  GDLVLAKMKGFPAWPAMISEPEQWGQTSVKKKILVYFYGTKQM 74


>07_03_1530 +
           27502546-27502671,27503487-27503561,27504670-27504746,
           27505576-27507522,27508478-27508946,27509898-27510079,
           27510746-27511208,27511295-27511691,27511810-27511937,
           27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 33.1 bits (72), Expect(2) = 0.002
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 151 GDFIFAKVKGYPAWPA 198
           GD + AK+KG+PAWPA
Sbjct: 26  GDLVLAKMKGFPAWPA 41



 Score = 26.2 bits (55), Expect(2) = 0.002
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 220 KKYFVYFYGTGEIANLPPNMIFDYAENKDKFL 315
           KK  VYFYGT +IA      +  + E K K L
Sbjct: 81  KKLLVYFYGTKQIAFCNYTDLEAFTEEKRKSL 112


>05_03_0389 -
           13409848-13409964,13410049-13410114,13410209-13410325,
           13410822-13410893,13410979-13411258,13411528-13411730,
           13412230-13412316,13412705-13412758,13413042-13413221,
           13414402-13414576,13414628-13414918,13414923-13415344
          Length = 687

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = +1

Query: 154 DFIFAKVKGYPAWPARVQRLNGKKYFVYFYGTGEIANLPPNMIFDYA 294
           +++FA + GY   PA VQ   G  Y  YF G G IA   P M+ D A
Sbjct: 571 NYVFALLTGYRDPPAGVQIREGLHYNPYFPG-GAIA--MPKMLIDGA 614


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,821,720
Number of Sequences: 37544
Number of extensions: 301573
Number of successful extensions: 495
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)