Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_K08
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97193-6|AAV34803.1|  780|Caenorhabditis elegans Hypothetical pr...    50   2e-06
U97193-5|AAV34804.1|  783|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical pr...    32   0.61 
Z54306-2|CAA91088.1|  260|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AY008141-1|AAG32094.1|  375|Caenorhabditis elegans heterotrimeri...    28   9.9  
AF039715-1|AAB96733.2|  375|Caenorhabditis elegans G protein, su...    28   9.9  
AB003487-1|BAA22402.1|  375|Caenorhabditis elegans G protein alp...    28   9.9  
AB003486-1|BAA22401.1|  375|Caenorhabditis elegans G protein a(s...    28   9.9  

>U97193-6|AAV34803.1|  780|Caenorhabditis elegans Hypothetical
           protein C06A5.3a protein.
          Length = 780

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
 Frame = +1

Query: 139 NTTSGDFIFAKVKGYPAWPARV----QRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKD 306
           N   GD I+AK+KG+P WPA+V    +    ++  V F+GT E + + PN + DY  N+ 
Sbjct: 12  NFQPGDLIWAKMKGFPPWPAKVLERSEDAPARRIPVMFFGTLETSFMKPNDLSDYLPNR- 70

Query: 307 KFLTKTVKRRDFNDGVXXI 363
                  K++DFN  V  I
Sbjct: 71  LIHEIPRKQKDFNKAVQEI 89


>U97193-5|AAV34804.1|  783|Caenorhabditis elegans Hypothetical
           protein C06A5.3b protein.
          Length = 783

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
 Frame = +1

Query: 139 NTTSGDFIFAKVKGYPAWPARV----QRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKD 306
           N   GD I+AK+KG+P WPA+V    +    ++  V F+GT E + + PN + DY  N+ 
Sbjct: 12  NFQPGDLIWAKMKGFPPWPAKVLERSEDAPARRIPVMFFGTLETSFMKPNDLSDYLPNR- 70

Query: 307 KFLTKTVKRRDFNDGVXXI 363
                  K++DFN  V  I
Sbjct: 71  LIHEIPRKQKDFNKAVQEI 89


>Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical
           protein C54G4.8 protein.
          Length = 285

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +1

Query: 154 DFIFAKVKGYPAWPARVQRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKD 306
           D++F+ + GY   PA V+  +GK Y  YF   G I ++P  +  +  E KD
Sbjct: 161 DYVFSLLTGYLEAPAGVKVDDGKAYNPYF--PGGIISMPQQLFDEGIEYKD 209


>Z54306-2|CAA91088.1|  260|Caenorhabditis elegans Hypothetical
           protein B0457.4 protein.
          Length = 260

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 133 TFLPIFSITMPLPPCXMLSLHNTYSRQRSDGK 38
           TFL  + I  PLPP  +L  H  +S+  +D K
Sbjct: 203 TFLKHWKIESPLPPMDLLRDHEHFSKALADAK 234


>AY008141-1|AAG32094.1|  375|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 205 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 342
           +++  K+Y +  F+   E  NLP + +FD  E+KD    K   R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326


>AF039715-1|AAB96733.2|  375|Caenorhabditis elegans G protein,
           subunit alpha protein 1 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 205 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 342
           +++  K+Y +  F+   E  NLP + +FD  E+KD    K   R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326


>AB003487-1|BAA22402.1|  375|Caenorhabditis elegans G protein alpha
           subunit protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 205 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 342
           +++  K+Y +  F+   E  NLP + +FD  E+KD    K   R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326


>AB003486-1|BAA22401.1|  375|Caenorhabditis elegans G protein a(s)
           subunit protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 205 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 342
           +++  K+Y +  F+   E  NLP + +FD  E+KD    K   R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,738,453
Number of Sequences: 27780
Number of extensions: 261588
Number of successful extensions: 513
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)