Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_K05
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 45 8e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 45 8e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 44 2e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 42 7e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 42 7e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 42 7e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 41 0.001
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 40 0.002
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 40 0.002
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.003
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 36 0.028
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 36 0.037
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 36 0.037
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 35 0.084
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 35 0.084
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.11
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 34 0.11
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.11
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.11
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 34 0.11
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 34 0.11
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 34 0.11
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.20
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 33 0.20
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 33 0.20
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 33 0.20
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.34
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.34
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 32 0.60
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 31 1.0
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 31 1.0
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 31 1.0
U29377-9|AAA68718.3| 405|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 3.2
AC024202-10|AAF36032.1| 327|Caenorhabditis elegans Hypothetical... 29 3.2
U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 29 5.5
AF045646-8|AAK29830.1| 541|Caenorhabditis elegans Udp-glucurono... 29 5.5
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 28 7.3
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 28 7.3
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 28 7.3
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 28 7.3
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 28 7.3
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 28 7.3
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 28 7.3
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 28 7.3
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 28 7.3
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 28 7.3
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 28 7.3
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 28 7.3
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 44.8 bits (101), Expect = 8e-05
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Frame = +2
Query: 182 EQVQ-LDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETAS 349
E+VQ LY+ NI L++DG+R FS G + SA++ + N K F V FE
Sbjct: 335 ERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPE 394
Query: 350 EAKLAMMKMN----GSEPLNLKISIXHKTIRKTQ 439
EA A+ MN G++PL + ++ K R+ Q
Sbjct: 395 EATAAVTDMNSKMIGAKPLYVALA-QRKEDRRAQ 427
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNP---NKRFAIVQFETASEAKLAMMKMN 379
++I N+ R + + FS G +LS +++ + +K + V FET A+ A+ K+N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 380 G 382
G
Sbjct: 207 G 207
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKR----FAIVQFETASEAKLAMMKM 376
LYI ++ +SE + FS G VLS R+ ++ R +A V F+ ++A+ A+ M
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 377 N 379
N
Sbjct: 119 N 119
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 44.8 bits (101), Expect = 8e-05
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Frame = +2
Query: 182 EQVQ-LDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETAS 349
E+VQ LY+ NI L++DG+R FS G + SA++ + N K F V FE
Sbjct: 335 ERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPE 394
Query: 350 EAKLAMMKMN----GSEPLNLKISIXHKTIRKTQ 439
EA A+ MN G++PL + ++ K R+ Q
Sbjct: 395 EATAAVTDMNSKMIGAKPLYVALA-QRKEDRRAQ 427
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNP---NKRFAIVQFETASEAKLAMMKMN 379
++I N+ R + + FS G +LS +++ + +K + V FET A+ A+ K+N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 380 G 382
G
Sbjct: 207 G 207
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKR----FAIVQFETASEAKLAMMKM 376
LYI ++ +SE + FS G VLS R+ ++ R +A V F+ ++A+ A+ M
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 377 N 379
N
Sbjct: 119 N 119
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQFETASEAKLAMMKM 376
D+T +Y+ NI + ++ +R FS +G + R+ K +R+A V++E A A+M+M
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKT--QRYAFVRYEKKECATKAIMEM 292
Query: 377 NGSE 388
NG E
Sbjct: 293 NGKE 296
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +2
Query: 170 DNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQFETAS 349
D Q D+T +Y+ NI L ED IR AF + G + R K +A V+FET
Sbjct: 245 DEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVRTFKIQG--YAFVKFETKE 301
Query: 350 EAKLAMMKMNGSE 388
A A+++MN ++
Sbjct: 302 SAARAIVQMNNAD 314
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETASEAKLAMMKMN 379
LY+ N+ + +DG++ F +G + SA++ + N K F V FE EA A+ +MN
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 318
Query: 380 G----SEPLNLKISIXHKTIRKTQ 439
S+PL + I+ K R+ Q
Sbjct: 319 SKMVCSKPLYVAIA-QRKEDRRAQ 341
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKR----FAIVQFETASEAKLAMMKM 376
LY+ ++ ++E + FS G VLS R+ ++ R +A V F+ ++A+ AM M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 377 N 379
N
Sbjct: 94 N 94
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETASEAKLAMMKMN 379
LY+ N+ + +DG++ F +G + SA++ + N K F V FE EA A+ +MN
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 315
Query: 380 G----SEPLNLKISIXHKTIRKTQ 439
S+PL + I+ K R+ Q
Sbjct: 316 SKMVCSKPLYVAIA-QRKEDRRAQ 338
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETASEAKLAMMKMN 379
++I N+ + + I FS G +LS +++ + + K + V FET A+ A+ K+N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 380 G 382
G
Sbjct: 119 G 119
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETASEAKLAMMKMN 379
LY+ N+ + +DG++ F +G + SA++ + N K F V FE EA A+ +MN
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 380 G----SEPLNLKISIXHKTIRKTQ 439
S+PL + I+ K R+ Q
Sbjct: 379 SKMVCSKPLYVAIA-QRKEDRRAQ 401
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETASEAKLAMMKMN 379
++I N+ + + I FS G +LS +++ + + K + V FET A+ A+ K+N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 380 G 382
G
Sbjct: 182 G 182
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKR----FAIVQFETASEAKLAMMKM 376
LY+ ++ ++E + FS G VLS R+ ++ R +A V F+ ++A+ AM M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 377 N 379
N
Sbjct: 94 N 94
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETASEAKLAMMKMN 379
LY+ N+ + +DG++ F +G + SA++ + N K F V FE EA A+ +MN
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 380 G----SEPLNLKISIXHKTIRKTQ 439
S+PL + I K R+ Q
Sbjct: 379 SKMVCSKPLYVAIG-QRKEDRRAQ 401
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN---KRFAIVQFETASEAKLAMMKMN 379
++I N+ + + I FS G +LS +++ + + K + V FET A+ A+ K+N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 380 G 382
G
Sbjct: 182 G 182
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKR----FAIVQFETASEAKLAMMKM 376
LY+ ++ ++E + FS G VLS R+ ++ R +A V F+ ++A+ AM M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 377 N 379
N
Sbjct: 94 N 94
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +2
Query: 182 EQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQF---ETASE 352
+Q + D T LYI N+P +E + +K G V+S R+ + P+ + V F ++ +
Sbjct: 181 QQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEK 240
Query: 353 AKLAMMKMNGSEPLNLKISIXHKTIRKTQHDNKDRNYSTSRNGHCSTXEXSSI 511
++ + +NG + I++ K + STSR H S + SS+
Sbjct: 241 CEVIISALNGGRFDTMSKEGPALLIKQADTGRKSKVGSTSR--HPSFQQFSSL 291
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +2
Query: 203 TKLYIINIPRGLSEDGIRAAFSKHGKVLSAR--LSKNPN--KRFAIVQFETASEAKLAMM 370
T LYI + ++D +R SK+G + S + + K N K + V FE+ A A+
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 166
Query: 371 KMN 379
+N
Sbjct: 167 GLN 169
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 SEDGIRAAFSKHGKVLSARLSK-NPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIX 415
S D R F +G+V+ + K N NK FA+VQF +A+ A+ N +P++ +
Sbjct: 273 SPDHYRRRFESYGQVIDVDMVKSNDNKAFAVVQFTNIDDAQKALQDTNIPKPMSYQSRPS 332
Query: 416 HKTI 427
H+ I
Sbjct: 333 HRII 336
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 SEDGIRAAFSKHGKVLSARLSK-NPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIX 415
S D R F +G+V+ + K N NK FA+VQF +A+ A+ N +P++ +
Sbjct: 288 SPDHYRRRFESYGQVIDVDMVKSNDNKAFAVVQFTNIDDAQKALQDTNIPKPMSYQSRPS 347
Query: 416 HKTI 427
H+ I
Sbjct: 348 HRII 351
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 SEDGIRAAFSKHGKVLSARLSK-NPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIX 415
S D R F +G+V+ + K N NK FA+VQF +A+ A+ N +P++ +
Sbjct: 288 SPDHYRRRFESYGQVIDVDMVKSNDNKAFAVVQFTNIDDAQKALQDTNIPKPMSYQSRPS 347
Query: 416 HKTI 427
H+ I
Sbjct: 348 HRII 351
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 SEDGIRAAFSKHGKVLSARLSK-NPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIX 415
S D R F +G+V+ + K N NK FA+VQF +A+ A+ N +P++ +
Sbjct: 273 SPDHYRRRFESYGQVIDVDMVKSNDNKAFAVVQFTNIDDAQKALQDTNIPKPMSYQSRPS 332
Query: 416 HKTI 427
H+ I
Sbjct: 333 HRII 336
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 SEDGIRAAFSKHGKVLSARLSK-NPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIX 415
S D R F +G+V+ + K N NK FA+VQF +A+ A+ N +P++ +
Sbjct: 288 SPDHYRRRFESYGQVIDVDMVKSNDNKAFAVVQFTNIDDAQKALQDTNIPKPMSYQSRPS 347
Query: 416 HKTI 427
H+ I
Sbjct: 348 HRII 351
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 SEDGIRAAFSKHGKVLSARLSK-NPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIX 415
S D R F +G+V+ + K N NK FA+VQF +A+ A+ N +P++ +
Sbjct: 288 SPDHYRRRFESYGQVIDVDMVKSNDNKAFAVVQFTNIDDAQKALQDTNIPKPMSYQSRPS 347
Query: 416 HKTI 427
H+ I
Sbjct: 348 HRII 351
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Frame = +2
Query: 146 TYDVQYADDNA---GEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN- 313
TYDV + +A Q ++ +++ NI +ED + FS++GK+ + L+ +
Sbjct: 33 TYDVVDEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRT 92
Query: 314 ---KRFAIVQFETASEAKLAMMKMNGSEPLNLKISI 412
K +A+V++ET EA A+ + N ++ L + +
Sbjct: 93 GFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKV 128
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 38.7 bits (86), Expect = 0.005
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Frame = +2
Query: 137 NEHTYDVQYADD--NAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN- 307
NE + YA D + Q D +YI + LSE + A FS++G+V++ L ++
Sbjct: 14 NERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDK 73
Query: 308 ---PNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIXHKTIRKTQHDNKDRNYSTSR 475
+K FA + ++ LA+ NG I + H K +D + T R
Sbjct: 74 DTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKR 132
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARL----SKNPNKRFAIVQFETASEAKLAMMKM 376
+++ NI +SED IR+ FSK G VLS ++ K + ++F A++A+ +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 377 NGSE 388
NG E
Sbjct: 80 NGYE 83
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +2
Query: 191 QLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSAR-LSKNP---NKRFAIVQFETASEAK 358
Q+ + LY+ IP+ ++ + + F G+++++R LS N +K V+F+ EA
Sbjct: 124 QIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
Query: 359 LAMMKMNGSEP 391
+A+ +NGS P
Sbjct: 184 VAIKTLNGSIP 194
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 182 EQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQF---ETASE 352
+Q + D T LYI N+P +E + +K G V+S R+ + P+ + V F ++ +
Sbjct: 155 QQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEK 214
Query: 353 AKLAMMKMNG 382
++ + +NG
Sbjct: 215 CEVIISALNG 224
Score = 33.1 bits (72), Expect = 0.26
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Frame = +2
Query: 86 HSRPQRR-REWDPMRDDFNEHTYDVQYADDNAGEQVQLDHTKLYIINIPRGLSEDGIRAA 262
H R Q R P + Y D + L T LYI + ++D +R
Sbjct: 41 HGRVQNHMRGSGPFGNSNGYGRYTAPRGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREM 100
Query: 263 FSKHGKVLSAR--LSKNPN--KRFAIVQFETASEAKLAMMKMN 379
SK+G + S + + K N K + V FE+ A A+ +N
Sbjct: 101 CSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLN 143
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNP----NKRFAIVQFETASEAKLA 364
D + N+P+ ++ED +R F K G+V+ ++++ K FA V FE+ +A A
Sbjct: 174 DENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARA 233
Query: 365 MMKMN 379
+ ++N
Sbjct: 234 IAELN 238
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 206 KLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQFETASEAKLAMMKMNGS 385
K+Y+ N+P + E + F K+G++ + FA V+FE +A+ A+ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 386 E 388
E
Sbjct: 70 E 70
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 206 KLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQFETASEAKLAMMKMNGS 385
K+Y+ N+P + E + F K+G++ + FA V+FE +A+ A+ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 386 E 388
E
Sbjct: 70 E 70
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.084
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +2
Query: 182 EQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNP--NKRFAIVQFETASEA 355
E ++Y+ NIP E + A F +G+VLS + N +K F V ++
Sbjct: 44 EPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESC 103
Query: 356 KLAMMKMNGSEPLNLKISIXHKTIRKTQHDNKDRN 460
+ A ++ S I + T + + N +N
Sbjct: 104 EKARAALHESHVQGRIIEVRRATPTRRKLINNPQN 138
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.084
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +2
Query: 182 EQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNP--NKRFAIVQFETASEA 355
E ++Y+ NIP E + A F +G+VLS + N +K F V ++
Sbjct: 44 EPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESC 103
Query: 356 KLAMMKMNGSEPLNLKISIXHKTIRKTQHDNKDRN 460
+ A ++ S I + T + + N +N
Sbjct: 104 EKARAALHESHVQGRIIEVRRATPTRRKLINNPQN 138
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 176 AGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHG---KVLSARLSKNPNKRFAIVQFETA 346
A + ++D KL+I + + SED +RA F+ G +V R + +K A V+++
Sbjct: 115 ASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHG 174
Query: 347 SEAKLAMMKMNGSEPL 394
+A +A+ ++GS+ +
Sbjct: 175 LDAHMAISALHGSQTM 190
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 167 DDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D N D KL++ IPR L E +R F + GK+ + K+
Sbjct: 17 DSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/83 (24%), Positives = 38/83 (45%)
Frame = +2
Query: 134 FNEHTYDVQYADDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN 313
FN + D ++ +L++ N+P + E ++ FS HG + LS
Sbjct: 93 FNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS---G 149
Query: 314 KRFAIVQFETASEAKLAMMKMNG 382
K FA ++ +T + A+ A ++G
Sbjct: 150 KGFAFLRLDTRAHAESAKEAIDG 172
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/83 (24%), Positives = 38/83 (45%)
Frame = +2
Query: 134 FNEHTYDVQYADDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN 313
FN + D ++ +L++ N+P + E ++ FS HG + LS
Sbjct: 93 FNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS---G 149
Query: 314 KRFAIVQFETASEAKLAMMKMNG 382
K FA ++ +T + A+ A ++G
Sbjct: 150 KGFAFLRLDTRAHAESAKEAIDG 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 176 AGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHG---KVLSARLSKNPNKRFAIVQFETA 346
A + ++D KL+I + + SED +RA F+ G +V R + +K A V+++
Sbjct: 115 ASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHG 174
Query: 347 SEAKLAMMKMNGSEPL 394
+A +A+ ++GS+ +
Sbjct: 175 LDAHMAISALHGSQTM 190
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 167 DDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D N D KL++ IPR L E +R F + GK+ + K+
Sbjct: 17 DSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKV--LSARLSKNPNKRFAIVQFETASEA 355
L++ N+P + E IR F +HGKV + + N + +A V F+T +A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQA 221
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKV--LSARLSKNPNKRFAIVQFETASEA 355
L++ N+P + E IR F +HGKV + + N + +A V F+T +A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQA 221
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKV--LSARLSKNPNKRFAIVQFETASEA 355
L++ N+P + E IR F +HGKV + + N + +A V F+T +A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQA 198
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = +2
Query: 116 DPMRDDFNEHTYDVQYAD---DNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVL 286
+P + EH ++ D + E++ L+ +L++ N+P ED ++ F K+G+V
Sbjct: 248 EPEHEVIEEHGASLESRDKEEETVREKI-LETGRLFLRNLPYATKEDDLQFLFKKYGEVS 306
Query: 287 SAR--LSKNPN--KRFAIVQFETASEAKLAMMKMNG 382
+ + K K FAIV+F A A ++G
Sbjct: 307 EVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDG 342
Score = 31.9 bits (69), Expect = 0.60
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +2
Query: 203 TKLYIINIPRGLSEDGIRAAFSKHGKVLSARL---SKNPNKRFAIVQFETASEAKLAMMK 373
T+L + N+P +E +R F K+G++ A L + + FA V F A A+ K
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 374 MNGSEPLNLKISIXHKTIRKTQHDNKDRNYS 466
N + + K+++ + R NK R +S
Sbjct: 63 SNQTFFNSKKLTV--EECRPFGDANKPRAWS 91
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +2
Query: 182 EQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKR-----FAIVQFETA 346
++ Q + TKL + N+P S + F G V + R+ K P ++ F V F +A
Sbjct: 741 QKEQGECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISA 800
Query: 347 SEAKLA 364
EA A
Sbjct: 801 DEAHRA 806
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = +2
Query: 215 IINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQFETASEAKLAMMKMNGSEPL 394
++N + D I + GKVL + P A+V+FE+ AK A MNG++
Sbjct: 127 VLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIY 186
Query: 395 N----LKISIXHKTIRKTQHDNKDR 457
+ LK+ + Q +KD+
Sbjct: 187 SGCCTLKVEFAKPDRVRVQRQDKDQ 211
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = +2
Query: 215 IINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKRFAIVQFETASEAKLAMMKMNGSEPL 394
++N + D I + GKVL + P A+V+FE+ AK A MNG++
Sbjct: 127 VLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIY 186
Query: 395 N----LKISIXHKTIRKTQHDNKDR 457
+ LK+ + Q +KD+
Sbjct: 187 SGCCTLKVEFAKPDRVRVQRQDKDQ 211
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLS--KNPNKRFAIVQFETASEAKLAMMKMNG 382
+Y+ N + E+ + F + G V+ L ++ N +FA+V+FE A+ MNG
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAKFALVEFEDELSVLFAIELMNG 74
Query: 383 SEPLNLKISI 412
N ++ +
Sbjct: 75 VRLFNQELQV 84
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSAR-LSKNPNKRFAIVQFETASEAKLAMMKMNGS 385
LY+ N+ ++ED I F++ G V + + N +A V+F +A A+ MN
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 386 EPLNLKISIXHKTIRKTQHDNKDRNYSTSRNGHCSTXEXSS 508
L+ ++ + + + Q +K T+R+ H + SS
Sbjct: 108 LLLDREMKV-NWAVEPGQQQSK---IDTTRHFHVFVGDLSS 144
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Frame = +2
Query: 206 KLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNP----NKRFAIVQFETASEAKLAMMK 373
++Y+ +IP + ED + F K GK+ RL +P ++ +A V + +A A
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 374 MNGSE-----PLNLKISI 412
+G E PL + +SI
Sbjct: 261 YDGHEISTGKPLKVNVSI 278
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 296 LSKNPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIXHKTI 427
+ N NK FA+VQF +A+ A+ N +P++ + H+ I
Sbjct: 2 VKSNDNKAFAVVQFTNIDDAQKALQDTNIPKPMSYQSRPSHRII 45
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 296 LSKNPNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIXHKTI 427
+ N NK FA+VQF +A+ A+ N +P++ + H+ I
Sbjct: 2 VKSNDNKAFAVVQFTNIDDAQKALQDTNIPKPMSYQSRPSHRII 45
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 406 YLQVQRFGAVHFHHGQFGFTSSLELHYGESLVRIF 302
+L +Q++ FH+G F FT+ L+++ G L+ IF
Sbjct: 44 FLVIQKWEGGCFHYGYFSFTNPLKVNSGLDLLLIF 78
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 406 YLQVQRFGAVHFHHGQFGFTSSLELHYGESLVRIF 302
+L +Q++ FH+G F FT+ L+++ G L+ IF
Sbjct: 44 FLVIQKWEGGCFHYGYFSFTNPLKVNSGLDLLLIF 78
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 406 YLQVQRFGAVHFHHGQFGFTSSLELHYGESLVRIF 302
+L +Q++ FH+G F FT+ L+++ G L+ IF
Sbjct: 44 FLVIQKWEGGCFHYGYFSFTNPLKVNSGLDLLLIF 78
>U29377-9|AAA68718.3| 405|Caenorhabditis elegans Hypothetical
protein K05F1.1 protein.
Length = 405
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -2
Query: 136 KIVPHRVPLPAPLRPTVIRHYPYVKEQEAMKKSLLTGYNGLLT 8
K+ P LP PLRP+ I H Y+K + M LL G+ LT
Sbjct: 348 KLTPSAECLPNPLRPSTIIHANYLK--DLMYLWLLFGFMAFLT 388
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARL----SKNPNKRFAIVQFETASEAKLAMMKM 376
+Y+ N P +E+ + FS G++ + R+ + FA ++F A+ A+ +M
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 377 NGSE 388
NG+E
Sbjct: 67 NGAE 70
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPNKR-FAIVQFETASEAKLAMMKMNG 382
LYI N+P ++ + + F K G V R+ R A V +E +AK A ++G
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTACEHLSG 79
>AC024202-10|AAF36032.1| 327|Caenorhabditis elegans Hypothetical
protein Y71H2B.3 protein.
Length = 327
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 127 PHRVPLPAPLRPTVIRHYPYVKEQEAMKKSLL-TGYNGL 14
PHR P P P TV P++ ++A +K + GY G+
Sbjct: 221 PHRHPAPPPATKTVPTLKPFIITRDAQQKQVFGLGYPGI 259
>U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical
protein B0554.7 protein.
Length = 491
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/99 (21%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = -2
Query: 382 AVHFHHGQFGFTSSLELH-YGESLVRIFAQAGA*NFSVLREGGANAVLAQTSRYVDYVQL 206
++HF+ F T ++ G + + ++ NF + N+ V +
Sbjct: 274 SMHFNQNNFRMTYIPAVYGLGAGVGEVLSELTFENFLTTK----NSYKVSVGMIVSELSK 329
Query: 205 RVVKLHLFPGIIIGVLHVIRVFVKIVPHRVPLPAPLRPT 89
R+ L P ++IG + ++ V+ ++ P+ AP+RPT
Sbjct: 330 RIQGFGLKPTMVIGSV-ILTVYCALLHASTPMEAPMRPT 367
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 296 LSKN-PNKRFAIVQFETASEAKLAMMKMNGSEPLNLKISIXHKTIRKTQHDNKDRNYSTS 472
LSKN + +F I + E + MMK G P S K +T+ KD+ Y
Sbjct: 430 LSKNLVDDQFNITKQFYNDEDEFQMMKRKGIYPYEYMNSF--KRYDETELPTKDKFYDEL 487
Query: 473 RNGHCS 490
N HCS
Sbjct: 488 NNKHCS 493
>AF045646-8|AAK29830.1| 541|Caenorhabditis elegans
Udp-glucuronosyltransferase protein52 protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 179 GEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKNPN--KRFAIVQFETASE 352
G LD T+L NI +GL ++++ + K +S L + PN K+ + E AS
Sbjct: 418 GTTYMLDKTRLTTPNIVKGLEAVLYDSSYTLNAKRISKMLHERPNPPKKIFVEWIEFASR 477
Query: 353 AKLAMMKMN 379
L +N
Sbjct: 478 NPLLHRNLN 486
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 209 LYIINIPRGLSEDGIRAAFSKHGKVLSARL----SKNPNKRFAIVQFETASEAKLAMMKM 376
+Y+ N P +ED + FS+ G V + R+ + FA V+F + A+ A+ +
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 377 NG 382
NG
Sbjct: 66 NG 67
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D K+++ IPR +E R F K+G V S + ++
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +2
Query: 155 VQYADDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLS-ARLSKNP------- 310
VQ A G V +LY+ NIP G +E+ + F++ + A+ NP
Sbjct: 168 VQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQIN 227
Query: 311 -NKRFAIVQFETASEAKLAM 367
+K FA ++F + E M
Sbjct: 228 LDKNFAFIEFRSIDETTAGM 247
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D K+++ IPR +E R F K+G V S + ++
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D K+++ IPR +E R F K+G V S + ++
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D K+++ IPR +E R F K+G V S + ++
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D K+++ IPR +E R F K+G V S + ++
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D K+++ IPR +E R F K+G V S + ++
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 197 DHTKLYIINIPRGLSEDGIRAAFSKHGKVLSARLSKN 307
D K+++ IPR +E R F K+G V S + ++
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +2
Query: 155 VQYADDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLS-ARLSKNP------- 310
VQ A G V +LY+ NIP G +E+ + F++ + A+ NP
Sbjct: 168 VQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQIN 227
Query: 311 -NKRFAIVQFETASEAKLAM 367
+K FA ++F + E M
Sbjct: 228 LDKNFAFIEFRSIDETTAGM 247
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +2
Query: 155 VQYADDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLS-ARLSKNP------- 310
VQ A G V +LY+ NIP G +E+ + F++ + A+ NP
Sbjct: 143 VQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQIN 202
Query: 311 -NKRFAIVQFETASEAKLAM 367
+K FA ++F + E M
Sbjct: 203 LDKNFAFIEFRSIDETTAGM 222
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +2
Query: 155 VQYADDNAGEQVQLDHTKLYIINIPRGLSEDGIRAAFSKHGKVLS-ARLSKNP------- 310
VQ A G V +LY+ NIP G +E+ + F++ + A+ NP
Sbjct: 146 VQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQIN 205
Query: 311 -NKRFAIVQFETASEAKLAM 367
+K FA ++F + E M
Sbjct: 206 LDKNFAFIEFRSIDETTAGM 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,449
Number of Sequences: 27780
Number of extensions: 310100
Number of successful extensions: 998
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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