Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_K03
(885 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 3e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 56 3e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 3e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 5e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 49 5e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 42 6e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 1e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 40 4e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 37 3e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.019
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.057
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.100
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.30
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.6
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.3 bits (137), Expect = 5e-11
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAXEWGCSTWL-VSSERLWR 364
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 365 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 59.3 bits (137), Expect = 5e-11
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAXEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 445
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 446 VSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
V W + + ++ +P D QTC KFG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.4 bits (135), Expect = 8e-11
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAXEWG-CSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTF 532
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 533 KFG 541
KFG
Sbjct: 168 KFG 170
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G Y V++NGS ++ + + + +P D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G Y V++NGS ++ + + + +P D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.8 bits (131), Expect = 2e-10
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Frame = +2
Query: 194 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAXEWGCSTWL-VSSERLW 361
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 362 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKF 538
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 539 G 541
G
Sbjct: 164 G 164
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G Y V++NGS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-10
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAXEWGCSTWL-VSSERLWR 364
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 365 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTF 532
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 533 KFG 541
K G
Sbjct: 170 KLG 172
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 56.4 bits (130), Expect = 3e-10
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAXEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 436
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 437 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G VSW + + ++ +P D Q+C KFG
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFG 177
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G Y V+++GS ++ + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFG 130
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 55.2 bits (127), Expect = 8e-10
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G Y V+++GS ++ + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFG 130
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 54.8 bits (126), Expect = 1e-09
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Frame = +2
Query: 161 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAXEWG-CST 334
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 335 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 502
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 503 WPXDMQTCTFKFG 541
+P D QTC KFG
Sbjct: 152 FPFDEQTCFMKFG 164
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFG 130
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFG 130
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAXEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 445
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 446 VSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
++ + + + +P D Q C KFG
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFG 167
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPD 370
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKF 538
+L N A + V S+ G V W+ + + ++ +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.2 bits (112), Expect = 5e-08
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Frame = +2
Query: 176 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAXEWGCSTWLV 343
LP H K VV + +R + E + + + +W D RLS+ S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 344 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPXD 514
ER+WRPD N + + R+S +G + + RL I M+L N+P D
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 515 MQTCTFKFG 541
Q+C G
Sbjct: 173 RQSCPLILG 181
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 49.2 bits (112), Expect = 5e-08
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +2
Query: 233 IRESESTVRILADLQMNWIDKRLSWNAXEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 403
I E + T + + +W+D+RL++ + + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFG 541
R+ +G V + RL I M L+N+P D Q C +FG
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.4 bits (105), Expect = 4e-07
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Frame = +2
Query: 191 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLW 361
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 362 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTF 532
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 533 KFG 541
FG
Sbjct: 186 NFG 188
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 42.3 bits (95), Expect = 6e-06
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +2
Query: 200 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAXEW-GCSTWLVSSERLWRPDVV 376
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 377 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPXDMQTCT 529
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCT 174
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.5 bits (93), Expect = 1e-05
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 233 IRESESTVRILADLQMNWIDKRLSWNAXEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 412
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 413 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCT 529
R R+S +GSV++ R + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.5 bits (88), Expect = 4e-05
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = +2
Query: 197 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAXEWGCS-TWLVSSERLWRPD 370
+V + L +R A I + + + + W+D+RL +N L + R+W PD
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLTLTDASRVWMPD 119
Query: 371 VVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFK 535
+ N + + R+ NGSV + R+ ++ M L +P D Q C+ +
Sbjct: 120 LFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +2
Query: 284 WIDKRLSWNAXEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKKRT-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 437 NGSVSWIKRLDISTPISMQLDNWPXDMQTC 526
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +2
Query: 284 WIDKRLSWNAXEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKKRT-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 437 NGSVSWIKRLDISTPISMQLDNWPXDMQTC 526
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +2
Query: 284 WIDKRLSWNAXEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKKRT-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 437 NGSVSWIKRLDISTPISMQLDNWPXDMQTC 526
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 36.7 bits (81), Expect = 3e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +2
Query: 284 WIDKRLSWNAXEWGCS-TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVS 451
W+D+RL +N L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVL 149
Query: 452 WIKRLDISTPISMQLDNWPXDMQTCTFK 535
+ R+ ++ M L +P D Q C+ +
Sbjct: 150 YSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Frame = +2
Query: 143 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAX 316
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 317 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 490
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 491 QLDNWPXDMQTCTF 532
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.002
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Frame = +2
Query: 143 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAX 316
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 317 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 490
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 491 QLDNWPXDMQTCTF 532
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.002
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Frame = +2
Query: 143 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAX 316
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 317 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 490
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 491 QLDNWPXDMQTCTF 532
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.019
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAXEWGCSTWLVSSERLWRP 367
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 368 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTF 532
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 356 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTC 526
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 527 T 529
+
Sbjct: 147 S 147
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.100
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +2
Query: 194 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN--AXEWGCSTWLVSSE---R 355
++V+ + + N I + R+ ++ +WI+ RL E G + E
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 356 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPXDMQ 520
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 521 TC 526
C
Sbjct: 129 IC 130
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 26.6 bits (56), Expect = 0.30
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTC 526
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 527 TFKF 538
F
Sbjct: 157 PLIF 160
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.1
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPXDMQ 520
+ +WRPD NA + T + + + ++ ++ +L + +M +P D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 521 TC 526
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 337 PSAAAPFPCVPTQS 296
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,832
Number of Sequences: 438
Number of extensions: 4771
Number of successful extensions: 79
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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