Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_K02
(919 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 36 4e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 7e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 32 0.006
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 32 0.008
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.011
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.019
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 30 0.026
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 30 0.026
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.045
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.059
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.059
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.078
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 28 0.10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.14
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.14
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.18
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.18
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.32
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.32
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.32
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 1.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.9
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 9.0
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 36.3 bits (80), Expect = 4e-04
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMX 495
ER+WRPD N + + R+S +G + RL I M+L N+P D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 496 TC 501
+C
Sbjct: 175 SC 176
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.5 bits (78), Expect = 7e-04
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 322 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
+E++W PD N + D R R+S +GSV+ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 493 XTCTFQVRF*GCTXL 537
CT ++ G T L
Sbjct: 173 QNCTVEIESYGYTVL 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 32.3 bits (70), Expect = 0.006
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWP 483
V S+ +WRPD+VL N A G+Y + +A V +G V + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 484 NDMXTCTFQV 513
D+ TC ++
Sbjct: 162 YDVQTCVLKL 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.9 bits (69), Expect = 0.008
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
V S+ +WRPD+VL NA A +A + + G V + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 493 XTCTFQ 510
TC +
Sbjct: 165 QTCVLK 170
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.5 bits (68), Expect = 0.011
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
V S+ +WRPD+VL NA A +A ++ G V + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 493 XTCTFQ 510
TC +
Sbjct: 161 QTCVMK 166
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.7 bits (66), Expect = 0.019
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
+ RLW+PDV++ N+A G Y V NNG+ + + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 493 XTC 501
C
Sbjct: 160 QRC 162
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 30.3 bits (65), Expect = 0.026
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 493 XTC 501
TC
Sbjct: 163 QTC 165
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 30.3 bits (65), Expect = 0.026
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPN 486
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 487 DMXTC 501
D C
Sbjct: 179 DTHRC 183
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.5 bits (63), Expect = 0.045
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 292 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPISM 465
E+G T L V SE +W PD+VL N A G + +A + G V + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 466 QLDNWPNDMXTC 501
+ +P D TC
Sbjct: 148 DVRYFPFDQQTC 159
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.059
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 420
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 228 LRIQADLQMNWIDKRLXWNAGRVG 299
L A L++ W+D L WN G
Sbjct: 101 LTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.059
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 420
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 228 LRIQADLQMNWIDKRLXWNAGRVG 299
L A L++ W+D L WN G
Sbjct: 101 LTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.078
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 420
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 228 LRIQADLQMNWIDKRLXWNAGRVG 299
L A L++ W+D L WN G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYG 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 28.3 bits (60), Expect = 0.10
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 465
G V SE +W PD+VL N A G+Y + +A + G VS + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 466 QLDNWPNDMXTC 501
++ +P D +C
Sbjct: 161 NVEYFPFDEQSC 172
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.14
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 493 XTC 501
C
Sbjct: 123 QHC 125
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 228 LRIQADLQMNWIDKRLXWNAGRVG 299
L A L++ W+D L WN G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.14
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAA 366
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.18
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 493 XTC 501
C
Sbjct: 123 QHC 125
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 228 LRIQADLQMNWIDKRLXWNAGRVG 299
L A L++ W+D L WN G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.18
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQLDNWPND 489
V R+WRPD +L N A + VS+ G V + + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 490 MXTCTFQ 510
C +
Sbjct: 142 EQRCVLK 148
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 420
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 228 LRIQADLQMNWIDKRLXWNAGRVG 299
L A L++ W+D L WN G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 420
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 228 LRIQADLQMNWIDKRLXWNAGRVG 299
L A L++ W+D L WN G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 420
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 228 LRIQADLQMNWIDKRLXWNAGRVG 299
L A L++ W+D L WN G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.2 bits (50), Expect = 1.7
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWPND 489
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 490 MXTCTFQV 513
+ C +
Sbjct: 127 IQICPIYI 134
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 400 RVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFQV 513
R+ NG+V+ + R + +L+ +P D C+F +
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 400 RVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFQV 513
R+ NG+V+ + R + +L+ +P D C+F +
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 400 RVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFQV 513
R+ NG+V+ + R + +L+ +P D C+F +
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 400 RVSNNGSVSXIKRLDISTPISMQLDNWPNDMXTCTFQV 513
R+ NG+V+ + R + +L+ +P D C+F +
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.9
Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMX 495
+ +WRPD NA + T + + + ++ + +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 496 TCTFQV 513
C Q+
Sbjct: 176 ECKLQM 181
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 109 GQ*CCVFAFCRTSYSTSEEKXVTRII 32
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 9.0
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 203 NIRESESTAANTGRSSNELDRQTTXLERRASGAAALGWCPRN 328
NI +SE+ + SSN L +T + +S + C R+
Sbjct: 188 NIEKSENESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRD 229
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,030
Number of Sequences: 438
Number of extensions: 4708
Number of successful extensions: 42
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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