Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_K01
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 38 0.009
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 36 0.029
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.9
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 30 1.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 29 5.8
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 5.8
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 48.4 bits (110), Expect = 7e-06
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 2/193 (1%)
Frame = +1
Query: 58 TAGVRKAPPSPRLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTVAT 231
T GV + LLF +Y+NDI +A FADDT +Y S K LQ+
Sbjct: 74 TCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALD 132
Query: 232 TMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIP 411
+ W + ++ +N +K T+ + + RR++ + PI
Sbjct: 133 AVVDWTKGSKLTLNQSK--------------TVHVTVGKRRIDF------KYHLDGYPIE 172
Query: 412 WAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICTRSKMXLRNXVTLYKTCIR 591
+ LG + ++ F H + + A F L ++ T +K + + LYKT IR
Sbjct: 173 RKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKTFIR 229
Query: 592 PVMTYASVVFAHT 630
P + Y +VV + T
Sbjct: 230 PRLEYGTVVSSPT 242
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 44.0 bits (99), Expect = 1e-04
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
Frame = +1
Query: 55 VTAGVRKAPPSPRLLFSLYIND--IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTVA 228
+++GV + S LLF L+IN+ I +P +++ FADD I+++ ++ + +
Sbjct: 877 ISSGVPQGSVSGPLLFILFINNLLIDLAPTINISCFADDVKIFHT--DPTIIQNSIDIIV 934
Query: 229 TTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPI 408
+ W + + + PTKS + L TR N + ++ PI
Sbjct: 935 S----WSKLNELPLAPTKSAL--------------LALGTRNKN------QSYSVDGVPI 970
Query: 409 PWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICTRSKMXLRNXVTLYKTCI 588
+ V+ LG+ D ++ F HI V A ++ + S + LYKT +
Sbjct: 971 TPSSTVRDLGLITDCKLKFEHHIVKVSCLAMLRSKQILKAFSSNSPKFYAH---LYKTYV 1027
Query: 589 RPVMTYASVVFAHTGPHT 642
P+M Y S V+A PH+
Sbjct: 1028 APIMNYCSEVYA---PHS 1042
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 42.3 bits (95), Expect = 4e-04
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 26/221 (11%)
Frame = +1
Query: 40 PGPXHVTAGVRKAPPSPRLLFSLYINDIPRS--PETHLALFADDTAIYYSCRKKALLHRR 213
P +++GV K S LF ++IN + S P + FADD +Y L+
Sbjct: 48 PNIHPISSGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY--SHSPPLIQTT 105
Query: 214 LQTVATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSI-PLPTRRVNTPAPAVR--- 381
+ + T W ++ + K+ A+L K G N L + PL V A R
Sbjct: 106 IDLITT----WSENNKLPLAVHKA-ALLNKLGFSSNCVLLLAPLINSLVCRLLAASRTGV 160
Query: 382 -----------------PITMYD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTVRDRAA 501
P T+Y +P +P + LG+ DS++TF+PHIK + +
Sbjct: 161 STVAHSKTCLLHLGKKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI---VS 217
Query: 502 FILGRLYPMICTRSKMXLRNXVTLYKTCIRPVMTYASVVFA 624
L R ++ + + L+KT I P++ Y S V++
Sbjct: 218 LALLRCKQLLKSFKSLCPEFYCNLFKTYILPLIEYGSAVYS 258
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 37.9 bits (84), Expect = 0.009
Identities = 31/127 (24%), Positives = 53/127 (41%)
Frame = +1
Query: 97 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTVATTMGQWFRKWRIDINP 276
LF+ Y+ D+P +T L +ADD +I +K ++Q + ++ ++ + I+
Sbjct: 543 LFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISA 602
Query: 277 TKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTLDSR 456
KST +F P P I D PIP K LG+TL++
Sbjct: 603 EKSTVTVFSCD-----------PKEHKTKP-----DIYWMDDPIPVINAPKLLGITLNTM 646
Query: 457 MTFRPHI 477
+ H+
Sbjct: 647 TGTKDHV 653
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +1
Query: 403 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICTRSKMXLRNXVTLYKT 582
PI + LG + ++ F H K + A F L ++ T +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 583 CIRPVMTYASVVFAHT 630
IRP + Y +VV + T
Sbjct: 197 FIRPRLEYGTVVSSPT 212
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 283 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 420
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 301 KRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 420
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 242 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFAQSRCTTSPYRGPR 421
+GS G+ST A SS T + + S G+STP P P + S G
Sbjct: 1235 TGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEM 1294
Query: 422 RSN-I*ASPSTVG 457
S+ +PST+G
Sbjct: 1295 TSHGSTQTPSTIG 1307
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 328 LSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 498
++ PLP+ P+ VRP T +D IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFNGRPPS-VVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 283 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 420
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 343 PTRRVNTPAPAVRPITMYDQPIPW 414
P R V++P +PIT++DQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 8 FVPISSRGNAFPAPXTSQPESARLRPLPXYYSVCISTIY 124
++ IS + N P S P RL P Y++VC++T+Y
Sbjct: 176 YISISEKLNE--TPEYSVPIVPRLNKPPHYFTVCMATLY 212
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +3
Query: 231 HHGTVVPEVAHRH*P-HEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAH 407
HHG H H P H H G + G+ HH H SP H +P H H
Sbjct: 525 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGH 579
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 359 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 234
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,328,448
Number of Sequences: 27780
Number of extensions: 501634
Number of successful extensions: 1974
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1961
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -