Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J23
(818 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 31 0.013
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 31 0.017
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 28 0.090
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 25 0.84
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 24 1.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 1.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 7.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.8
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 31.1 bits (67), Expect = 0.013
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +3
Query: 621 HTGGHPL-CEFCEKRFMDPDELYRHLR---KEHLY-CHLCDADGXNSIMLH 758
HTG P CE+C K F + L H R KE Y C +C+ +S LH
Sbjct: 114 HTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLH 164
Score = 27.1 bits (57), Expect = 0.21
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 621 HTGGHPL-CEFCEKRFMDPDELYRHLR 698
HT P C+ CE+ F +L+RH+R
Sbjct: 142 HTKERPYKCDVCERAFEHSGKLHRHMR 168
Score = 25.4 bits (53), Expect = 0.64
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 621 HTGGHP-LCEFCEKRFMDPDELYRHLR 698
HTG P C C K F+ +L H+R
Sbjct: 170 HTGERPHKCTVCSKTFIQSGQLVIHMR 196
Score = 22.6 bits (46), Expect = 4.5
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 642 CEFCEKRFMDPDELYRHLR 698
C C K F P L RH R
Sbjct: 94 CNICGKTFAVPARLTRHYR 112
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 30.7 bits (66), Expect = 0.017
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +3
Query: 606 TLMIPHTGGHPL-CEFCEKRFMDPDELYRHLR---KEHLY-CHLCDA 731
T M HTG P C C+++F+ L RHLR E Y C LC A
Sbjct: 27 THMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELCAA 73
Score = 27.1 bits (57), Expect = 0.21
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = +3
Query: 621 HTGGHPL-CEFCEKRFMDPDELYRHLR----KEHLYCHLCD 728
HTG P C C KRF L H+R ++ +C CD
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCD 44
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 28.3 bits (60), Expect = 0.090
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 642 CEFCEKRFMDPDELYRHLRKEHL--YCHLC 725
C++CEK ++ L H+R L CHLC
Sbjct: 19 CKYCEKVYVSLGALKMHIRTHTLPCKCHLC 48
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 25.0 bits (52), Expect = 0.84
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 639 LCEFCEKRFMDPDELYRHLRKEH 707
+CEFC +R+ + L H +H
Sbjct: 37 VCEFCNRRYRTKNSLTTHKSLQH 59
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.8 bits (49), Expect = 1.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 180 VQNVLETNYASILVRLSLRHDCCIVYLGFCKSVS 79
VQ V++ YA L +L+ D C G C S++
Sbjct: 330 VQFVVDAVYAFALALHNLQKDVCSKLKGLCPSMA 363
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.8 bits (49), Expect = 1.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 180 VQNVLETNYASILVRLSLRHDCCIVYLGFCKSVS 79
VQ V++ YA L +L+ D C G C S++
Sbjct: 420 VQFVVDAVYAFALALHNLQKDVCSKLKGLCPSMA 453
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 785 CGNVEQVRSVKHNRIXS 735
CGN Q+ HN+I S
Sbjct: 1467 CGNTYQLYLTSHNKIGS 1483
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 785 CGNVEQVRSVKHNRIXS 735
CGN Q+ HN+I S
Sbjct: 1463 CGNTYQLYLTSHNKIGS 1479
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,472
Number of Sequences: 438
Number of extensions: 4840
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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