Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J19
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126349-1|AAI26350.1| 648|Homo sapiens C1orf127 protein protein. 32 2.3
AL358492-3|CAH72679.1| 656|Homo sapiens chromosome 1 open readi... 32 2.3
AL358492-2|CAO03597.1| 648|Homo sapiens chromosome 1 open readi... 32 2.3
AK094437-1|BAC04355.1| 656|Homo sapiens protein ( Homo sapiens ... 32 2.3
BC020211-1|AAH20211.1| 684|Homo sapiens cleavage and polyadenyl... 31 7.1
BC011654-1|AAH11654.1| 684|Homo sapiens cleavage and polyadenyl... 31 7.1
AK223487-1|BAD97207.1| 684|Homo sapiens cleavage and polyadenyl... 31 7.1
AF171877-1|AAF00224.1| 684|Homo sapiens cleavage and polyadenyl... 31 7.1
AC080162-3|AAY14858.1| 684|Homo sapiens unknown protein. 31 7.1
EF036508-1|ABO65094.1| 149|Homo sapiens cleavage and polyadenyl... 30 9.4
BC015394-1|AAH15394.1| 422|Homo sapiens KIAA0974 protein protein. 30 9.4
AB023191-1|BAA76818.1| 565|Homo sapiens KIAA0974 protein protein. 30 9.4
>BC126349-1|AAI26350.1| 648|Homo sapiens C1orf127 protein protein.
Length = 648
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 551 WRSRPYASSHPPLAISATSTRSS-NPPIPYTNHPRT 655
WR RP +HP L + +S SS +PP P P +
Sbjct: 320 WRPRPVLPTHPALTLPVSSDASSPSPPAPRPERPES 355
>AL358492-3|CAH72679.1| 656|Homo sapiens chromosome 1 open reading
frame 127 protein.
Length = 656
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 551 WRSRPYASSHPPLAISATSTRSS-NPPIPYTNHPRT 655
WR RP +HP L + +S SS +PP P P +
Sbjct: 328 WRPRPVLPTHPALTLPVSSDASSPSPPAPRPERPES 363
>AL358492-2|CAO03597.1| 648|Homo sapiens chromosome 1 open reading
frame 127 protein.
Length = 648
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 551 WRSRPYASSHPPLAISATSTRSS-NPPIPYTNHPRT 655
WR RP +HP L + +S SS +PP P P +
Sbjct: 320 WRPRPVLPTHPALTLPVSSDASSPSPPAPRPERPES 355
>AK094437-1|BAC04355.1| 656|Homo sapiens protein ( Homo sapiens
cDNA FLJ37118 fis, clone BRACE2022328. ).
Length = 656
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 551 WRSRPYASSHPPLAISATSTRSS-NPPIPYTNHPRT 655
WR RP +HP L + +S SS +PP P P +
Sbjct: 328 WRPRPVLPTHPALTLPVSSDASSPSPPAPRPERPES 363
>BC020211-1|AAH20211.1| 684|Homo sapiens cleavage and
polyadenylation specific factor 3, 73kDa protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1
Query: 502 TVTSAVVQQRSTVTGILRLGAEGKTTAS-RLTRYASR*XFMMEETFGSDCTVTLFD-LVS 329
TVT+ +++ +S +R GA K + + Y+ R M+++ FG DC D ++S
Sbjct: 579 TVTTVILEVQSNPK--IRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILS 636
Query: 328 VPVRSKYRXLKRDDQTL 278
V V K L + +T+
Sbjct: 637 VTVDGKTANLNLETRTV 653
>BC011654-1|AAH11654.1| 684|Homo sapiens cleavage and
polyadenylation specific factor 3, 73kDa protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1
Query: 502 TVTSAVVQQRSTVTGILRLGAEGKTTAS-RLTRYASR*XFMMEETFGSDCTVTLFD-LVS 329
TVT+ +++ +S +R GA K + + Y+ R M+++ FG DC D ++S
Sbjct: 579 TVTTVILEVQSNPK--IRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILS 636
Query: 328 VPVRSKYRXLKRDDQTL 278
V V K L + +T+
Sbjct: 637 VTVDGKTANLNLETRTV 653
>AK223487-1|BAD97207.1| 684|Homo sapiens cleavage and
polyadenylation specific factor 3, 73kDa variant
protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1
Query: 502 TVTSAVVQQRSTVTGILRLGAEGKTTAS-RLTRYASR*XFMMEETFGSDCTVTLFD-LVS 329
TVT+ +++ +S +R GA K + + Y+ R M+++ FG DC D ++S
Sbjct: 579 TVTTVILEVQSNPK--IRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILS 636
Query: 328 VPVRSKYRXLKRDDQTL 278
V V K L + +T+
Sbjct: 637 VTVDGKTANLNLETRTV 653
>AF171877-1|AAF00224.1| 684|Homo sapiens cleavage and
polyadenylation specificity factor 73 kDa subunit
protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1
Query: 502 TVTSAVVQQRSTVTGILRLGAEGKTTAS-RLTRYASR*XFMMEETFGSDCTVTLFD-LVS 329
TVT+ +++ +S +R GA K + + Y+ R M+++ FG DC D ++S
Sbjct: 579 TVTTVILEVQSNPK--IRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILS 636
Query: 328 VPVRSKYRXLKRDDQTL 278
V V K L + +T+
Sbjct: 637 VTVDGKTANLNLETRTV 653
>AC080162-3|AAY14858.1| 684|Homo sapiens unknown protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1
Query: 502 TVTSAVVQQRSTVTGILRLGAEGKTTAS-RLTRYASR*XFMMEETFGSDCTVTLFD-LVS 329
TVT+ +++ +S +R GA K + + Y+ R M+++ FG DC D ++S
Sbjct: 579 TVTTVILEVQSNPK--IRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILS 636
Query: 328 VPVRSKYRXLKRDDQTL 278
V V K L + +T+
Sbjct: 637 VTVDGKTANLNLETRTV 653
>EF036508-1|ABO65094.1| 149|Homo sapiens cleavage and
polyadenylation specific factor 3 protein.
Length = 149
Score = 30.3 bits (65), Expect = 9.4
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1
Query: 502 TVTSAVVQQRSTVTGILRLGAEGKTTAS-RLTRYASR*XFMMEETFGSDCTVTLFD-LVS 329
TVT+ +++ +S +R GA K + + Y+ R M+++ FG DC D ++S
Sbjct: 44 TVTTVILEVQSNPK--IRKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILS 101
Query: 328 VPVRSKYRXLKRDDQTL 278
V V K L + +T+
Sbjct: 102 VTVDGKTDNLNLETRTV 118
>BC015394-1|AAH15394.1| 422|Homo sapiens KIAA0974 protein protein.
Length = 422
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 521 GHPFILSHYYWRSRPYASSHPPLAISATSTRSSNPPIPYTNHP 649
G ILS W +R S L+ + STR NPP P T HP
Sbjct: 273 GSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPP-PRTLHP 314
>AB023191-1|BAA76818.1| 565|Homo sapiens KIAA0974 protein protein.
Length = 565
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 521 GHPFILSHYYWRSRPYASSHPPLAISATSTRSSNPPIPYTNHP 649
G ILS W +R S L+ + STR NPP P T HP
Sbjct: 370 GSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPP-PRTLHP 411
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,309,456
Number of Sequences: 237096
Number of extensions: 2863520
Number of successful extensions: 15367
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15356
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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