Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_J13
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0477 + 24057677-24059099,24059556-24060448,24060456-240605...    29   3.9  
08_02_1448 - 27168389-27172021                                         29   5.2  
01_05_0141 - 18532695-18532709,18533255-18533365,18533585-185336...    29   5.2  
12_02_0954 - 24757417-24758214                                         29   6.8  
07_03_0658 - 20366559-20367562,20367745-20367937                       29   6.8  

>11_06_0477 +
           24057677-24059099,24059556-24060448,24060456-24060578,
           24060995-24061036
          Length = 826

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 551 KTTAKCLAYNTTHYRDHFVQESWVRVS 471
           KTT     YN+T  R+HF   +WV VS
Sbjct: 203 KTTLARKIYNSTRIRNHFDTTAWVTVS 229


>08_02_1448 - 27168389-27172021
          Length = 1210

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 551 KTTAKCLAYNTTHYRDHFVQESWVRVS 471
           KTT   + YN T  RDHF  + W  VS
Sbjct: 204 KTTLAKMVYNDTRVRDHFQLKMWHCVS 230


>01_05_0141 -
           18532695-18532709,18533255-18533365,18533585-18533617,
           18534011-18534140,18534219-18535660,18535990-18536358
          Length = 699

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 551 KTTAKCLAYNTTHYRDHFVQESWVRVS 471
           KTT   + YN +  R HF    W+ VS
Sbjct: 211 KTTIAQMVYNDSRVRKHFEHSGWIHVS 237


>12_02_0954 - 24757417-24758214
          Length = 265

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -1

Query: 452 TLERPRPAARAHGAIVLAVGEQRLPEAAG---IPDQK*APVVVGSRH 321
           T +RPRP+  A  A+  A+       A+G      Q+ AP VV S+H
Sbjct: 100 TRKRPRPSRPARAAVAAAIAAAAAASASGSQIAAQQQQAPPVVMSQH 146


>07_03_0658 - 20366559-20367562,20367745-20367937
          Length = 398

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = -1

Query: 341 VVVGSRHRMRMILRQHGXGQCVEQRPLVPEVPVKRRLLNPQPFRQFACRQTVYADLVQQV 162
           V+ G+ H + M L +HG    V  + L+P        L    FRQ       + DL   V
Sbjct: 251 VIPGTEHALNMRLTEHGLDGHVSIKDLIPLAAANADELLSDAFRQLGLAGVEWNDLFWVV 310

Query: 161 -PG 156
            PG
Sbjct: 311 HPG 313


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,255,308
Number of Sequences: 37544
Number of extensions: 420680
Number of successful extensions: 1400
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)