Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J12
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 70 3e-12
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 40 0.004
V00200-1|CAA23486.2| 469|Drosophila melanogaster collagen protein. 31 2.6
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 31 2.6
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 31 2.6
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 31 2.6
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 31 2.6
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 31 2.6
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 31 2.6
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 31 2.6
AE014297-659|AAN13383.1| 878|Drosophila melanogaster CG17816-PB... 30 3.5
AJ973624-2|CAJ00580.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ973623-2|CAJ00578.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ973622-2|CAJ00576.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ973620-2|CAJ00572.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ973619-2|CAJ00570.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ973618-2|CAJ00568.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ973617-2|CAJ00566.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ973616-2|CAJ00564.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ973615-2|CAJ00562.1| 906|Drosophila melanogaster thiolester c... 30 4.6
AJ269541-1|CAB87810.1| 1496|Drosophila melanogaster TEP4 protein... 30 4.6
AE014134-3131|AAF53826.2| 1496|Drosophila melanogaster CG10363-P... 30 4.6
L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding pr... 29 6.0
AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p pro... 29 6.0
AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA... 29 6.0
AE013599-3436|AAF46879.2| 129|Drosophila melanogaster CG13510-P... 29 6.0
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 70.1 bits (164), Expect = 3e-12
Identities = 43/120 (35%), Positives = 62/120 (51%)
Frame = +2
Query: 251 KLQSRRAVLEAWSRRLADPAYG*RTVEAIRPVLSDWVNRDRGRLTFRATQVLTGHGCFGR 430
+L+ + + W R + G T + I P L++W + + + + TQ LT HGCF
Sbjct: 842 QLEIKEWIRGVWQTRWQESQRGRWTYKLI-PQLTEWADCEHKTVDYHMTQFLTDHGCFRG 900
Query: 431 YLHLVARREPTPKCHHCSGCNEDTAEHTLAYCPAFAEQRRVLVAKIGPDLSLPTVVATML 610
YL R T +C +C+ E TAEH L +C FAE+R LVA G LS +VA M+
Sbjct: 901 YLCRF-RHVDTAQCLYCTDAVE-TAEHILLHCSRFAEERAQLVALAGSPLSPRGLVAAMM 958
Score = 39.1 bits (87), Expect = 0.007
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 YWAPVW-CHALTRDNVAALRRPQRAIAVRAVRGYRTVSFEAACVLAG 138
Y AP+W C + + + + R R +A+R +RG+RT+S +AA L+G
Sbjct: 776 YAAPIWSCVSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSG 822
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/100 (28%), Positives = 43/100 (43%)
Frame = +2
Query: 248 RKLQSRRAVLEAWSRRLADPAYG*RTVEAIRPVLSDWVNRDRGRLTFRATQVLTGHGCFG 427
RK + ++++W R D + R P ++ + R + +LTGHG F
Sbjct: 882 RKTRLEECLIQSWQNRWDDDSEPGRVTHRFIPYVTLAYRDPSFGFSMRTSFLLTGHGSFN 941
Query: 428 RYLHLVARREPTPKCHHCSGCNEDTAEHTLAYCPAFAEQR 547
+LH A + T C C ED H L CP +A+ R
Sbjct: 942 AFLHGRALSD-TTAC-ACGDPYEDWM-HILCACPLYADLR 978
>V00200-1|CAA23486.2| 469|Drosophila melanogaster collagen protein.
Length = 469
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 ARGVVSPPGGPRLRVTDRRGDPPRPLGL-GESRPRTSHLPGDTGAHGTRLFRSLPAPCRP 450
A GV PG LR R P P G G SRP PG G G + R P
Sbjct: 59 AVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGF 118
Query: 451 EGADAEV 471
GAD V
Sbjct: 119 PGADGSV 125
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 ARGVVSPPGGPRLRVTDRRGDPPRPLGL-GESRPRTSHLPGDTGAHGTRLFRSLPAPCRP 450
A GV PG LR R P P G G SRP PG G G + R P
Sbjct: 820 AVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGF 879
Query: 451 EGADAEV 471
GAD V
Sbjct: 880 PGADGSV 886
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 ARGVVSPPGGPRLRVTDRRGDPPRPLGL-GESRPRTSHLPGDTGAHGTRLFRSLPAPCRP 450
A GV PG LR R P P G G SRP PG G G + R P
Sbjct: 820 AVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGF 879
Query: 451 EGADAEV 471
GAD V
Sbjct: 880 PGADGSV 886
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 ARGVVSPPGGPRLRVTDRRGDPPRPLGL-GESRPRTSHLPGDTGAHGTRLFRSLPAPCRP 450
A GV PG LR R P P G G SRP PG G G + R P
Sbjct: 820 AVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGF 879
Query: 451 EGADAEV 471
GAD V
Sbjct: 880 PGADGSV 886
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 ARGVVSPPGGPRLRVTDRRGDPPRPLGL-GESRPRTSHLPGDTGAHGTRLFRSLPAPCRP 450
A GV PG LR R P P G G SRP PG G G + R P
Sbjct: 820 AVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGF 879
Query: 451 EGADAEV 471
GAD V
Sbjct: 880 PGADGSV 886
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 ARGVVSPPGGPRLRVTDRRGDPPRPLGL-GESRPRTSHLPGDTGAHGTRLFRSLPAPCRP 450
A GV PG LR R P P G G SRP PG G G + R P
Sbjct: 820 AVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGF 879
Query: 451 EGADAEV 471
GAD V
Sbjct: 880 PGADGSV 886
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 ARGVVSPPGGPRLRVTDRRGDPPRPLGL-GESRPRTSHLPGDTGAHGTRLFRSLPAPCRP 450
A GV PG LR R P P G G SRP PG G G + R P
Sbjct: 820 AVGVPGNPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGF 879
Query: 451 EGADAEV 471
GAD V
Sbjct: 880 PGADGSV 886
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 30.7 bits (66), Expect = 2.6
Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Frame = +1
Query: 370 PRTSHLPGDTGAHGTRLFRSLPAPCRPEGADAEVP-------PLQWLQRGHGGAHARVLP 528
P S PG TG TR +P P P+ D P P + +GGA LP
Sbjct: 20243 PLCSCQPGFTGDALTRCL-PVPPPQPPKSNDIRDPCVPSPCGPYSQCRVVNGGASCSCLP 20301
Query: 529 RFRGAAP--RPRC 561
+ GAAP RP C
Sbjct: 20302 NYVGAAPNCRPEC 20314
>AE014297-659|AAN13383.1| 878|Drosophila melanogaster CG17816-PB,
isoform B protein.
Length = 878
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 381 RRPRSRFTQSERTGRIASTVRHP*AGSARRRDHASSTAR 265
R R+ S R+GR VRHP A RR+ A + AR
Sbjct: 602 RLVRALLRMSHRSGRSGRRVRHPAAVKRRRQPEAEANAR 640
>AJ973624-2|CAJ00580.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ973623-2|CAJ00578.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ973622-2|CAJ00576.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ973620-2|CAJ00572.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ973619-2|CAJ00570.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ973618-2|CAJ00568.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ973617-2|CAJ00566.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ973616-2|CAJ00564.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ973615-2|CAJ00562.1| 906|Drosophila melanogaster thiolester
containing protein IV protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 535 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 594
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 595 LKSLAKHEDDRTWWTEDLDKLRASK 619
>AJ269541-1|CAB87810.1| 1496|Drosophila melanogaster TEP4 protein
protein.
Length = 1496
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 1125 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 1184
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 1185 LKSLAKHEDDRTWWTEDLDKLRASK 1209
>AE014134-3131|AAF53826.2| 1496|Drosophila melanogaster CG10363-PA
protein.
Length = 1496
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 681 SAASLCEMVXSQKSSIAXQDSSLPSIVATTVGS----DKSGPIFATRTRRCSAKAGQYAS 514
+A SL ++ +K + A D ++ + A T S KS I+A + + A Q AS
Sbjct: 1125 TANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAKAPEAAKQVAS 1184
Query: 513 VCSAVSSLQPLQWWHFGVGSLRATR 439
+ S WW + LRA++
Sbjct: 1185 LKSLAKHEDDRTWWTEDLDKLRASK 1209
>L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding
protein protein.
Length = 197
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 548 GAAPRKRGSTRACAPPCPRCSHCSGGTSASAPSGRQGAGSDRNSR 414
G R+RGS+ + + R + SG + AS+ +GR+G GS N R
Sbjct: 112 GGGFRQRGSSGSSSRHTER-GYSSGRSGASSYNGREGGGSGFNRR 155
>AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p
protein.
Length = 200
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 548 GAAPRKRGSTRACAPPCPRCSHCSGGTSASAPSGRQGAGSDRNSR 414
G R+RGS+ + + R + SG + AS+ +GR+G GS N R
Sbjct: 115 GGGFRQRGSSGSSSRHTER-GYSSGRSGASSYNGREGGGSGFNRR 158
>AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA
protein.
Length = 200
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 548 GAAPRKRGSTRACAPPCPRCSHCSGGTSASAPSGRQGAGSDRNSR 414
G R+RGS+ + + R + SG + AS+ +GR+G GS N R
Sbjct: 115 GGGFRQRGSSGSSSRHTER-GYSSGRSGASSYNGREGGGSGFNRR 158
>AE013599-3436|AAF46879.2| 129|Drosophila melanogaster CG13510-PA
protein.
Length = 129
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 309 PTGDGPSRRSAPSSRTG*IATEDVSPSGRHRC 404
P G GP+R PS + T +PSGR C
Sbjct: 56 PIGSGPTRIRCPSCHAEVLTTVKSTPSGRTHC 87
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,100,692
Number of Sequences: 53049
Number of extensions: 731994
Number of successful extensions: 3657
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3646
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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