Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J07
(919 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 34 0.83
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 31 5.9
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 31 5.9
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 31 5.9
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 31 5.9
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 31 5.9
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 31 7.7
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 31 7.7
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 31 7.7
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 31 7.7
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 31 7.7
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 31 7.7
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 31 7.7
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 31 7.7
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 31 7.7
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 33.9 bits (74), Expect = 0.83
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 PFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---R 212
P LL +A + ++ L+ YD + P + VVN++L L N+
Sbjct: 7 PLLLLLLLAVCLGAQGRNQEERLLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 213 ESESTVRIQADLQMNWIDKRLXWN 284
E E + ++M W D RL W+
Sbjct: 67 EREEALTTNVWIEMQWCDYRLRWD 90
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 31.1 bits (67), Expect = 5.9
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +3
Query: 45 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NI 209
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 210 RESESTVRIQADLQMNWIDKRLXWNAGRVG 299
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 31.1 bits (67), Expect = 5.9
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +3
Query: 45 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NI 209
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 210 RESESTVRIQADLQMNWIDKRLXWNAGRVG 299
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 31.1 bits (67), Expect = 5.9
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +3
Query: 45 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NI 209
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 210 RESESTVRIQADLQMNWIDKRLXWNAGRVG 299
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 31.1 bits (67), Expect = 5.9
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +3
Query: 45 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NI 209
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 210 RESESTVRIQADLQMNWIDKRLXWNAGRVG 299
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 31.1 bits (67), Expect = 5.9
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +3
Query: 45 YPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NI 209
+P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 210 RESESTVRIQADLQMNWIDKRLXWNAGRVG 299
E V L+ W+D L WN G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 66 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 224
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 225 TVRIQADLQMNWIDKRLXWNAGR 293
+ L+ W D RL WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,382,330
Number of Sequences: 237096
Number of extensions: 1781976
Number of successful extensions: 3301
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3301
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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