Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J06
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038611-3|AAB92036.2| 333|Caenorhabditis elegans Hypothetical ... 33 0.26
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.4
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.4
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.2
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 29 4.2
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 28 7.3
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 28 7.3
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 9.6
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 28 9.6
>AF038611-3|AAB92036.2| 333|Caenorhabditis elegans Hypothetical
protein E04A4.1 protein.
Length = 333
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +1
Query: 541 PLAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLQGVRAGVKASVCHQRLHQRI 708
P + +SSN FH DL S+ NA LQ R G+KA H + I
Sbjct: 8 PFQLLKLPQKSSNYVFHRMLVADLIGFSLTSKNAKLQTKRLGLKAEDVHLEIRSGI 63
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 358
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 560 HQPDHQIPDSIHQPPQT*HPFPSIP*TPYYKEFAPGLKPPFV 685
+QP + P + +QPP PFP TPYY + G+ P++
Sbjct: 4 NQPPNYPPGNPNQPP----PFPP---TPYYPMYQAGMPMPYI 38
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 514 SRPYASSHPPLAISATSTRSSNPRFHTPT-TPDLTS 618
S PY P ++ ATS S +P F +P TP++ S
Sbjct: 12 SSPYPCPSPTISTPATSPSSISPTFASPNGTPNIAS 47
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 514 SRPYASSHPPLAISATSTRSSNPRFHTPT-TPDLTS 618
S PY P ++ ATS S +P F +P TP++ S
Sbjct: 12 SSPYPCPSPTISTPATSPSSISPTFASPNGTPNIAS 47
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQI*QCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQI*QCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQI*QCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,212,289
Number of Sequences: 27780
Number of extensions: 380241
Number of successful extensions: 1187
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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