Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J05
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens ... 40 0.014
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 39 0.025
X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI repe... 38 0.033
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 36 0.13
U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein. 36 0.23
U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein. 36 0.23
M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposo... 36 0.23
M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein. 36 0.23
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 36 0.23
AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein. 36 0.23
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 36 0.23
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 36 0.23
AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein. 36 0.23
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 35 0.31
AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens ... 35 0.31
X52235-2|CAA36480.1| 712|Homo sapiens protein ( Human DNA for L... 35 0.40
AK094887-1|BAC04450.1| 272|Homo sapiens protein ( Homo sapiens ... 34 0.53
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 33 0.93
AF103198-1|AAD30758.1| 129|Homo sapiens immunoglobulin heavy ch... 32 2.9
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 31 3.8
AK127765-1|BAC87120.1| 184|Homo sapiens protein ( Homo sapiens ... 31 3.8
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein. 31 5.0
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein. 31 6.6
BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein. 31 6.6
BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein. 31 6.6
AK128613-1|BAC87528.1| 258|Homo sapiens autosomal dominant, at... 31 6.6
BC001367-1|AAH01367.2| 418|Homo sapiens RBM15B protein protein. 30 8.7
>AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ45551 fis, clone BRTHA2037247. ).
Length = 238
Score = 39.5 bits (88), Expect = 0.014
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +1
Query: 103 LNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 282
+NR K + D KAF+K+ H ++ L +G+ + IIR R+ + G
Sbjct: 17 INRTKDKNHMIISIDAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRAICDKRTANIILNG 76
Query: 283 TRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ L G QG LSP + V +
Sbjct: 77 QQLEAFPLKTGTRQGCPLSPLLFNIVLE 104
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 38.7 bits (86), Expect = 0.025
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ R+ G + L G QG LSP + V +
Sbjct: 637 PTANIRLNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI
repetitive sequence (T-betaG41) 3kb downstream of
beta-globin gene. ).
Length = 140
Score = 38.3 bits (85), Expect = 0.033
Identities = 28/106 (26%), Positives = 45/106 (42%)
Frame = +1
Query: 49 NTRCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLV 228
+ R VQ H + +I+ +NR K + D KAFDK+ ++ L +G+ +
Sbjct: 8 HARLVQ--HTKSINIIQHINRTKDTNHMIISIDAEKAFDKIQQCFMLKTLNKLGIDGTYL 65
Query: 229 LIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
IIR + + G + L G QG LSP + V +
Sbjct: 66 KIIRAIYDKPTANIILSGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 111
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ + IIR
Sbjct: 577 RKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRTKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein.
Length = 1192
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 494 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 553
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 554 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 590
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein.
Length = 420
Score = 35.5 bits (78), Expect = 0.23
Identities = 23/93 (24%), Positives = 38/93 (40%)
Frame = +1
Query: 88 HILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFR 267
+++ +NR K + D KAFDK+ ++ L +G+ IIR +
Sbjct: 230 NVIQHINRAKDKSHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYGKPTAN 289
Query: 268 YRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ G + L G QG LSP + V +
Sbjct: 290 IILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 322
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein.
Length = 573
Score = 35.5 bits (78), Expect = 0.23
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR K + D KAFDK+ ++ L +G+ IIR
Sbjct: 91 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKIIRAIYDK 150
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 151 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 187
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.1 bits (77), Expect = 0.31
Identities = 23/93 (24%), Positives = 38/93 (40%)
Frame = +1
Query: 88 HILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFR 267
+++ +NR K + D KAFDK+ ++ L +G+ IIR +
Sbjct: 581 NVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTAN 640
Query: 268 YRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ G + L G QG LSP + V +
Sbjct: 641 IILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ39824 fis, clone SPLEN2011981. ).
Length = 372
Score = 35.1 bits (77), Expect = 0.31
Identities = 23/93 (24%), Positives = 38/93 (40%)
Frame = +1
Query: 88 HILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFR 267
+++ +NR K + D KAFDK+ ++ L +G+ IIR +
Sbjct: 153 NVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTAN 212
Query: 268 YRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ G + L G QG LSP + V +
Sbjct: 213 IILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 245
>X52235-2|CAA36480.1| 712|Homo sapiens protein ( Human DNA for
LINE-1 transposable element ORFI and II. ).
Length = 712
Score = 34.7 bits (76), Expect = 0.40
Identities = 23/93 (24%), Positives = 38/93 (40%)
Frame = +1
Query: 88 HILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFR 267
+++ +NR K + D KAFDK+ ++ L +G+ IIR +
Sbjct: 18 NVIQHINRTKDKNHMIVSIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTAN 77
Query: 268 YRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ G + L G QG LSP + V +
Sbjct: 78 IILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 110
>AK094887-1|BAC04450.1| 272|Homo sapiens protein ( Homo sapiens
cDNA FLJ37568 fis, clone BRCOC2002323. ).
Length = 272
Score = 34.3 bits (75), Expect = 0.53
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +1
Query: 145 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 324
D KAF+K+ H ++ L +G+ + IIR + G + LT G Q
Sbjct: 6 DAEKAFNKIKHPFMLKTLNKLGIDGTHIKIIRAIYDKPIANIILNGQKLEGFLLTTGTRQ 65
Query: 325 GSALSPXII*FVYQ 366
G LSP + V +
Sbjct: 66 GCPLSPLLFNIVLE 79
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 33.5 bits (73), Expect = 0.93
Identities = 23/97 (23%), Positives = 39/97 (40%)
Frame = +1
Query: 76 RLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSN 255
R + +++ +NR + D KAFDK+ ++ L +G+ IIR
Sbjct: 577 RKSINVIQHINRANDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 256 RSFRYRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ + G + L G QG LSP + V +
Sbjct: 637 PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>AF103198-1|AAD30758.1| 129|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 129
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 398 ALFADDTAIYYSCRKMSLLHRRLQIAVATLGQW 496
+L A+DTA+YY ++MS++ +I V G W
Sbjct: 77 SLRAEDTALYYCAKEMSVVEGYEEIVVLPTGNW 109
>BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein.
Length = 563
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 642 GQPIPWVSKVKYLGVTLDRGMTFPSPYKNXTR 737
G P PW K K ++ DRG T SPY+ +R
Sbjct: 258 GLPKPWEEKRKRRSLSSDRGRTTHSPYEERSR 289
>AK127765-1|BAC87120.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ45866 fis, clone OCBBF3001616. ).
Length = 184
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/87 (20%), Positives = 38/87 (43%)
Frame = +1
Query: 88 HILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFR 267
+++ +NR K + D KAF+++ H +I + + + + +I+ +
Sbjct: 27 NVIHHINRIKNKNQTIISIDAEKAFEEIQHRFMIKTVSKISIQGTYLNVIKAIYDKPTAN 86
Query: 268 YRVEGTRSRPRQLTAGVPQGSALSPXI 348
+ G + + L G QG LSP +
Sbjct: 87 MILNGEKLKAFPLRIGTRQGCPLSPLL 113
>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.1 bits (67), Expect = 5.0
Identities = 21/93 (22%), Positives = 37/93 (39%)
Frame = +1
Query: 88 HILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFR 267
+++ +NR K + D KA DK+ ++ L +G+ I+R +
Sbjct: 581 NVIQHINRAKDKNHMIISIDAEKALDKIQQPFVLKTLNKLGIDGTYFKIMRAIYDKPTAN 640
Query: 268 YRVEGTRSRPRQLTAGVPQGSALSPXII*FVYQ 366
+ G + L G QG LSP + V +
Sbjct: 641 IILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 673
>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
Length = 1312
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 517 HQPHEKRSGALQKGSPSEHHFEHPTP**ARKHLRRLVPSLSLASP 651
H PH + S S+H HP P + H + +L LASP
Sbjct: 1142 HTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASP 1186
>BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.
Length = 1006
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 517 HQPHEKRSGALQKGSPSEHHFEHPTP**ARKHLRRLVPSLSLASP 651
H PH + S S+H HP P + H + +L LASP
Sbjct: 836 HTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASP 880
>BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein.
Length = 1127
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 517 HQPHEKRSGALQKGSPSEHHFEHPTP**ARKHLRRLVPSLSLASP 651
H PH + S S+H HP P + H + +L LASP
Sbjct: 932 HTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASP 976
>AK128613-1|BAC87528.1| 258|Homo sapiens autosomal dominant,
ataxin 2) protein.
Length = 258
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 517 HQPHEKRSGALQKGSPSEHHFEHPTP**ARKHLRRLVPSLSLASP 651
H PH + S S+H HP P + H + +L LASP
Sbjct: 144 HTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASP 188
>BC001367-1|AAH01367.2| 418|Homo sapiens RBM15B protein protein.
Length = 418
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 642 GQPIPWVSKVKYLGVTLDRGMTFPSPYKNXTR 737
G P PW + K ++ DRG T SPY+ +R
Sbjct: 113 GLPKPWEERRKRRSLSSDRGRTTHSPYEERSR 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,827,138
Number of Sequences: 237096
Number of extensions: 2991150
Number of successful extensions: 18310
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 17626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18310
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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