Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J05
(815 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 82 1e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 79 5e-15
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 79 5e-15
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 79 9e-15
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 79 9e-15
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 79 9e-15
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 79 9e-15
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 79 9e-15
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 79 9e-15
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 79 9e-15
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 78 1e-14
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 78 1e-14
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 78 1e-14
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 78 1e-14
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 73 6e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 73 6e-13
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 73 6e-13
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 70 3e-12
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 70 4e-12
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 67 3e-11
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 66 4e-11
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 54 2e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 49 7e-06
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 42 8e-04
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 32 1.1
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 31 1.9
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 30 3.3
DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 pro... 29 5.8
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c... 29 5.8
BT012324-1|AAS77449.1| 381|Drosophila melanogaster AT25482p pro... 29 5.8
AY075365-1|AAR82806.1| 301|Drosophila melanogaster GM08848p pro... 29 5.8
AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P... 29 5.8
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P... 29 5.8
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA... 29 5.8
DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12 pro... 29 7.6
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 81.8 bits (193), Expect = 1e-15
Identities = 42/101 (41%), Positives = 62/101 (61%)
Frame = +1
Query: 46 QNTRCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRL 225
Q V+QVHRLT+HIL + ++ A+F D+ +AFD+VWH+GLI K+ + P
Sbjct: 554 QGHSTVEQVHRLTKHILQAFDDKEYC--NAVFIDMQQAFDRVWHDGLISKVKKL-FPAPY 610
Query: 226 VLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
+++ +L +R F RV + S PR + AGVPQGS L P +
Sbjct: 611 YGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLL 651
Score = 43.6 bits (98), Expect = 3e-04
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Frame = +2
Query: 344 LLFSLYINDIPRSPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 499
LL+S++ D+P H LA +ADD A+ YS + R LQ + TL W
Sbjct: 650 LLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWC 709
Query: 500 RKWRIDINPTKSAAVLFKRGRPPNITSSIPL 592
++W + +NP K+ F +T+ I L
Sbjct: 710 KRWILKVNPQKTINPCFTLKTLSPVTAPIEL 740
Score = 37.1 bits (82), Expect = 0.029
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 615 PPVSPITLFGQPIPWVSKVKYLGVTLDRGMTFPSPYKNXTRPXRVYSR 758
P +PI L G + S+ KYLG+TLD+ +TF K TR R Y R
Sbjct: 733 PVTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTR--RCYQR 778
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 79.4 bits (187), Expect = 5e-15
Identities = 39/95 (41%), Positives = 58/95 (61%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
+Q+HR+ L + K+ GA F DI +AFD+VWH GL+YK + P +L L+++
Sbjct: 561 EQLHRVVNFALEAMEN-KEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKS 617
Query: 244 FLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
FL R+F V+G +S + + AGVPQGS L P +
Sbjct: 618 FLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTL 652
Score = 37.5 bits (83), Expect = 0.022
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Frame = +2
Query: 347 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFR 502
L+S++ +D+P +P T +A +ADDTA+ + + LQ + QW
Sbjct: 652 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 711
Query: 503 KWRIDINPTKSAAVLF--KRGRPPNIT 577
W + IN K A V F + G P ++
Sbjct: 712 NWNVRINAEKCANVTFANRTGSCPGVS 738
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 630 ITLFGQPIPWVSKVKYLGVTLDRGMTFPSPYKNXTRPXR 746
++L G+ I KYLG+TLDR +TF N + R
Sbjct: 737 VSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFR 775
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 79.4 bits (187), Expect = 5e-15
Identities = 39/95 (41%), Positives = 58/95 (61%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
+Q+HR+ L + K+ GA F DI +AFD+VWH GL+YK + P +L L+++
Sbjct: 363 EQLHRVVNFALEAMEN-KEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKS 419
Query: 244 FLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
FL R+F V+G +S + + AGVPQGS L P +
Sbjct: 420 FLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTL 454
Score = 37.5 bits (83), Expect = 0.022
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Frame = +2
Query: 347 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFR 502
L+S++ +D+P +P T +A +ADDTA+ + + LQ + QW
Sbjct: 454 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 513
Query: 503 KWRIDINPTKSAAVLF--KRGRPPNIT 577
W + IN K A V F + G P ++
Sbjct: 514 NWNVRINAEKCANVTFANRTGSCPGVS 540
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 630 ITLFGQPIPWVSKVKYLGVTLDRGMTFPSPYKNXTRPXR 746
++L G+ I KYLG+TLDR +TF N + R
Sbjct: 539 VSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFR 577
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 78.6 bits (185), Expect = 9e-15
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 604 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 660
Query: 244 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPXI 348
+L+NR+F + + G SR Q+ AGVPQGS L P +
Sbjct: 661 YLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLL 696
Score = 35.1 bits (77), Expect = 0.12
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +2
Query: 344 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 499
LL+S++ +D+P SP + L +ADDT + S + R + + + W
Sbjct: 695 LLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWA 754
Query: 500 RKWRIDINPTKSAAVLF 550
KW I +N K+ V+F
Sbjct: 755 DKWGISVNAAKTGHVIF 771
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 78.6 bits (185), Expect = 9e-15
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 488 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 544
Query: 244 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPXI 348
+L+NR+F + + G SR Q+ AGVPQGS L P +
Sbjct: 545 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 580
Score = 34.7 bits (76), Expect = 0.15
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Frame = +2
Query: 344 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 499
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 579 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 638
Query: 500 RKWRIDINPTKSAAVLF--KRGRPPNI 574
KW I +N K+ V++ K P N+
Sbjct: 639 DKWGISVNAAKTGHVIYTLKNDIPTNL 665
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 78.6 bits (185), Expect = 9e-15
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 616 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 672
Query: 244 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPXI 348
+L+NR+F + + G SR Q+ AGVPQGS L P +
Sbjct: 673 YLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLL 708
Score = 37.1 bits (82), Expect = 0.029
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Frame = +2
Query: 344 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 499
LL+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 707 LLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWA 766
Query: 500 RKWRIDINPTKSAAVLF--KRGRPPN 571
KW I +N K+ V+F K P N
Sbjct: 767 DKWGISVNAAKTGHVIFTLKNDLPTN 792
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 78.6 bits (185), Expect = 9e-15
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 604 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 660
Query: 244 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPXI 348
+L+NR+F + + G SR Q+ AGVPQGS L P +
Sbjct: 661 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 696
Score = 34.7 bits (76), Expect = 0.15
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Frame = +2
Query: 344 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 499
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 500 RKWRIDINPTKSAAVLF--KRGRPPNI 574
KW I +N K+ V++ K P N+
Sbjct: 755 DKWGISVNAAKTGHVIYTLKNDIPTNL 781
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 78.6 bits (185), Expect = 9e-15
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 604 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 660
Query: 244 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPXI 348
+L+NR+F + + G SR Q+ AGVPQGS L P +
Sbjct: 661 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 696
Score = 34.7 bits (76), Expect = 0.15
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Frame = +2
Query: 344 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 499
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 500 RKWRIDINPTKSAAVLF--KRGRPPNI 574
KW I +N K+ V++ K P N+
Sbjct: 755 DKWGISVNAAKTGHVIYTLKNDIPTNL 781
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 78.6 bits (185), Expect = 9e-15
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 566 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 622
Query: 244 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPXI 348
+L+NR+F + + G SR Q+ AGVPQGS L P +
Sbjct: 623 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 658
Score = 34.7 bits (76), Expect = 0.15
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Frame = +2
Query: 344 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 499
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 657 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 716
Query: 500 RKWRIDINPTKSAAVLF--KRGRPPNI 574
KW I +N K+ V++ K P N+
Sbjct: 717 DKWGISVNAAKTGHVIYTLKNDIPTNL 743
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 78.6 bits (185), Expect = 9e-15
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 64 QQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 243
QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 604 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 660
Query: 244 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPXI 348
+L+NR+F + + G SR Q+ AGVPQGS L P +
Sbjct: 661 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 696
Score = 34.7 bits (76), Expect = 0.15
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Frame = +2
Query: 344 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 499
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 500 RKWRIDINPTKSAAVLF--KRGRPPNI 574
KW I +N K+ V++ K P N+
Sbjct: 755 DKWGISVNAAKTGHVIYTLKNDIPTNL 781
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 78.2 bits (184), Expect = 1e-14
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +1
Query: 67 QVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDF 246
Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L ++ ++
Sbjct: 161 QLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY 217
Query: 247 LSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPXI 348
LSNR+F R++G T SR + AGVPQGS L P +
Sbjct: 218 LSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVL 252
Score = 33.5 bits (73), Expect = 0.35
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 395 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFK-RGRPPN 571
LA +ADDT I + L Q + +W +KW I IN K+ +LF + N
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 343
Query: 572 ITSSIPLRSRRA 607
I + + +RA
Sbjct: 344 IYTPPLINGQRA 355
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 78.2 bits (184), Expect = 1e-14
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +1
Query: 67 QVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDF 246
Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L ++ ++
Sbjct: 608 QLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY 664
Query: 247 LSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPXI 348
LSNR+F R++G T SR + AGVPQGS L P +
Sbjct: 665 LSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVL 699
Score = 33.5 bits (73), Expect = 0.35
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 395 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFK-RGRPPN 571
LA +ADDT I + L Q + +W +KW I IN K+ +LF + N
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 572 ITSSIPLRSRRA 607
I + + +RA
Sbjct: 791 IYTPPLINGQRA 802
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 78.2 bits (184), Expect = 1e-14
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +1
Query: 67 QVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDF 246
Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L ++ ++
Sbjct: 608 QLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY 664
Query: 247 LSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPXI 348
LSNR+F R++G T SR + AGVPQGS L P +
Sbjct: 665 LSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVL 699
Score = 33.5 bits (73), Expect = 0.35
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 395 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFK-RGRPPN 571
LA +ADDT I + L Q + +W +KW I IN K+ +LF + N
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 572 ITSSIPLRSRRA 607
I + + +RA
Sbjct: 791 IYTPPLINGQRA 802
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 78.2 bits (184), Expect = 1e-14
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +1
Query: 67 QVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDF 246
Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L ++ ++
Sbjct: 608 QLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY 664
Query: 247 LSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPXI 348
LSNR+F R++G T SR + AGVPQGS L P +
Sbjct: 665 LSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVL 699
Score = 33.5 bits (73), Expect = 0.35
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 395 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFK-RGRPPN 571
LA +ADDT I + L Q + +W +KW I IN K+ +LF + N
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 572 ITSSIPLRSRRA 607
I + + +RA
Sbjct: 791 IYTPPLINGQRA 802
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 72.5 bits (170), Expect = 6e-13
Identities = 35/96 (36%), Positives = 58/96 (60%)
Frame = +1
Query: 61 VQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 240
++QV+R+T I R+ A+F D+A+AFD+VW +GL++K+ + +P +++
Sbjct: 554 IEQVNRITSEIRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLK 610
Query: 241 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
+L NR F R + + SR + AGVPQGS L P +
Sbjct: 611 SYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPIL 646
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 344 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDIN 523
+L++LY D P + FADDTAI + L + ++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 524 PTKSAAVLF---KRGRPPNITSSI 586
K V F K+ PP + ++I
Sbjct: 705 VQKCKQVTFTLNKQTCPPLVLNNI 728
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 72.5 bits (170), Expect = 6e-13
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +1
Query: 130 GALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLT 309
G + DI AFD VWH+GL++KL +G P L+ I+++FL++R F + ++S R L
Sbjct: 604 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILN 663
Query: 310 AGVPQGSALSPXI 348
AGVPQGS L P +
Sbjct: 664 AGVPQGSVLGPTL 676
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +2
Query: 347 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 526
LF+++ +DIP++ L+LFADD A+Y + S +++ +Q + L +++KW+I INP
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 735
Query: 527 TKSAAVLFKRGRPPNITSSIPLR 595
K+ A+ F + R P LR
Sbjct: 736 NKTNAIFFTKRRKPRYLPDRQLR 758
Score = 33.1 bits (72), Expect = 0.47
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 618 PVSPITLFGQPIPWVSKVKYLGVTLDRGMTF 710
P + + PI WV ++YLG+ D+ +TF
Sbjct: 753 PDRQLRILDSPIQWVDNIRYLGIIFDKKLTF 783
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 72.5 bits (170), Expect = 6e-13
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +1
Query: 130 GALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLT 309
G + DI AFD VWH+GL++KL +G P L+ I+++FL++R F + ++S R L
Sbjct: 552 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILN 611
Query: 310 AGVPQGSALSPXI 348
AGVPQGS L P +
Sbjct: 612 AGVPQGSVLGPTL 624
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +2
Query: 347 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 526
LF+++ +DIP++ L+LFADD A+Y + S +++ +Q + L +++KW+I INP
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 683
Query: 527 TKSAAVLFKRGRPPNITSSIPLR 595
K+ A+ F + R P LR
Sbjct: 684 NKTNAIFFTKRRKPRYLPDRQLR 706
Score = 33.1 bits (72), Expect = 0.47
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 618 PVSPITLFGQPIPWVSKVKYLGVTLDRGMTF 710
P + + PI WV ++YLG+ D+ +TF
Sbjct: 701 PDRQLRILDSPIQWVDNIRYLGIIFDKKLTF 731
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/96 (35%), Positives = 57/96 (59%)
Frame = +1
Query: 61 VQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 240
++QV+R+T I R+ A+F D+A+AFD+VW +GL++K+ + +P +++
Sbjct: 554 IEQVNRITSEIRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLK 610
Query: 241 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
+L N F R + + SR + AGVPQGS L P +
Sbjct: 611 SYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPIL 646
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 344 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDIN 523
+L++LY D P + FADDTAI + L + ++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 524 PTKSAAVLF---KRGRPPNITSSI 586
K V F K+ PP + ++I
Sbjct: 705 VQKCKQVTFTLNKQTCPPLVLNNI 728
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 69.7 bits (163), Expect = 4e-12
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +1
Query: 61 VQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 240
++QV+R+T I R+ ALF D+A+AFD+VW +GL++K+ + +P + +++
Sbjct: 95 IEQVNRITTEIRTAFEHREYCT--ALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLK 151
Query: 241 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
+L R F R + S + AGVPQGS L P +
Sbjct: 152 SYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPIL 187
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 344 LLFSLYINDIPRSPETHLALFADDTAI 424
+L++LY DIP + + + FADDTAI
Sbjct: 186 ILYTLYTADIPTNYQLTIFTFADDTAI 212
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 66.9 bits (156), Expect = 3e-11
Identities = 33/96 (34%), Positives = 56/96 (58%)
Frame = +1
Query: 61 VQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 240
++QV+R+T I R+ A+F D+++AFDKVW +GL++K+ + +P+ +++
Sbjct: 556 IEQVNRITTEIRTAFEYREYCT--AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLK 612
Query: 241 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
+L +R F R S + AGVPQGS L P +
Sbjct: 613 SYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTL 648
Score = 51.6 bits (118), Expect = 1e-06
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +2
Query: 347 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 526
L+ +Y DIP + ++ FADDTAI R +L + + + +W WRI +N
Sbjct: 648 LYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNE 707
Query: 527 TKSAAVLFKRGR---PPNITSSIPL 592
K V F R PP + +SIPL
Sbjct: 708 QKCKHVTFTLNRQDCPPLLLNSIPL 732
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 627 PITLFGQPIPWVSKVKYLGVTLDRGMTF 710
P+ L P+P +V YLGV LDR +T+
Sbjct: 724 PLLLNSIPLPKADEVTYLGVHLDRRLTW 751
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 66.5 bits (155), Expect = 4e-11
Identities = 35/96 (36%), Positives = 52/96 (54%)
Frame = +1
Query: 61 VQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 240
V+Q+HR+ E IL + ++ +LF DI +AFD+VWH GL K+ +P +++
Sbjct: 558 VEQLHRVVEQILTAYDSKEYC--NSLFLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLK 614
Query: 241 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
+L R F R S + AGVPQGS L P +
Sbjct: 615 SYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLL 650
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Frame = +2
Query: 344 LLFSLYINDIPRSP-----ETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKW 508
LL+ LY +D+P+ ++ LA FADD + Y R +Q +W R+W
Sbjct: 649 LLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRW 708
Query: 509 RIDINPTKSAAVLF--KRGRPPNI 574
I IN +KS V F KR PP +
Sbjct: 709 NIGINSSKSNNVCFTLKRRTPPPV 732
Score = 33.5 bits (73), Expect = 0.35
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 606 QTPPPVSPITLFGQPIPWVSKVKYLGVTLDRGMTF 710
+TPPPV + P+P + KYLGV LDR +TF
Sbjct: 727 RTPPPVY---IEEVPVPQPNAAKYLGVLLDRRLTF 758
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 54.4 bits (125), Expect = 2e-07
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 145 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 324
D +AFD+V + ++ +L G+ RL +I+ F++NRSFR R+ S L G+PQ
Sbjct: 584 DFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQ 643
Query: 325 GSALS 339
GS LS
Sbjct: 644 GSPLS 648
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 49.2 bits (112), Expect = 7e-06
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = +1
Query: 112 RKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRS 291
+ ++ T + D ++AFD+V + +I +L +++ I++F+SNR RV S
Sbjct: 565 KSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTS 624
Query: 292 RPRQLTAGVPQGSALS 339
P L G+PQGS +S
Sbjct: 625 SPLPLFNGIPQGSPIS 640
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 42.3 bits (95), Expect = 8e-04
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 145 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVP 321
D+ AF+ ++ + N+GVPD + +I ++ +R Y E G RS Q++AGVP
Sbjct: 557 DVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--QVSAGVP 614
Query: 322 QGSALSPXII*FVY 363
QGS L P + +Y
Sbjct: 615 QGSVLGPILWNIMY 628
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1
Query: 202 NMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 348
N P LV IR + SNR R Q+T GVPQGS L P +
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLPCESSEGVFR-HQVTGGVPQGSVLGPLL 61
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +1
Query: 145 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 324
D++KAFD + H + L G P V +++ +G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 325 GSALSPXI 348
G LSP +
Sbjct: 542 GDPLSPIL 549
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 555 GVALRTSLRASHSVVGAQTPPPVSPITLFGQPIPWVSKVKYLGVTLDRGMTF 710
G L TS + GA P + G+ +P+V +YLG+T+ GM F
Sbjct: 698 GDCLSTSKTVIMLLKGALRRAPT--VRFAGRNLPYVRSCRYLGITVSEGMKF 747
>DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12
protein.
Length = 1522
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 451 ASSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 573
+SS++P SS TV+P+VA + QP+E+R L + + H
Sbjct: 846 SSSSSP--SSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 884
>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
domain-containing proteinBBG-LP10 protein.
Length = 1842
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 454 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 573
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 64 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 103
>BT012324-1|AAS77449.1| 381|Drosophila melanogaster AT25482p
protein.
Length = 381
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 13 NSHRRTVRIPAQNTRCVQQVHRLTE 87
+S +RT R PA+NTR V+Q LTE
Sbjct: 74 SSVKRTARTPAKNTRSVRQQLTLTE 98
>AY075365-1|AAR82806.1| 301|Drosophila melanogaster GM08848p
protein.
Length = 301
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 13 NSHRRTVRIPAQNTRCVQQVHRLTE 87
+S +RT R PA+NTR V+Q LTE
Sbjct: 84 SSVKRTARTPAKNTRSVRQQLTLTE 108
>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
isoform A protein.
Length = 1420
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 13 NSHRRTVRIPAQNTRCVQQVHRLTE 87
+S +RT R PA+NTR V+Q LTE
Sbjct: 74 SSVKRTARTPAKNTRSVRQQLTLTE 98
>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
isoform B protein.
Length = 1430
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 13 NSHRRTVRIPAQNTRCVQQVHRLTE 87
+S +RT R PA+NTR V+Q LTE
Sbjct: 84 SSVKRTARTPAKNTRSVRQQLTLTE 108
>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 454 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 573
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 859 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 898
>DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12
protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 454 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQK 555
+S++ SS TV+P+VA + QP+E+R L +
Sbjct: 318 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSE 351
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,088,757
Number of Sequences: 53049
Number of extensions: 922979
Number of successful extensions: 2860
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2833
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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