Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J03
(878 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 9e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 3e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 3e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 53 4e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 4e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 50 4e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 48 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 3e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 6e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 6e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 43 4e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 9e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.043
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.5
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.7 bits (143), Expect = 9e-12
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXI 438
+D+RL + G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 439 KRLDISTPISMQLDNWPNDMQTCTFKFG 522
RL I M L+N+P D Q C +FG
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 60.1 bits (139), Expect = 3e-11
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 408
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 409 VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
+ G V + + + +P D QTC KFG
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFG 164
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 385 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V++NGS + + + + +P D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 385 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V++NGS + + + + +P D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 56.0 bits (129), Expect = 4e-10
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 426
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 427 VSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
V + + ++ +P D QTC KFG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V++NGS + + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS + + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFG 130
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS + + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFG 130
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 54.0 bits (124), Expect = 2e-09
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 513
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 514 KFG 522
KFG
Sbjct: 168 KFG 170
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.0 bits (124), Expect = 2e-09
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLX 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIST 459
W E+G L V S+ +WRPD+VL NA A +A + + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 460 PISMQLDNWPNDMQTCTFKFG 522
+ ++ +P D QTC KFG
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFG 172
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS + + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS + + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFG 130
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
G Y V+++GS + + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFG 130
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.2 bits (122), Expect = 3e-09
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Frame = +1
Query: 67 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 225
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 226 ESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 399
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 400 ---RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
+A + + G V + + ++ +P D QTC KFG
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFG 164
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.2 bits (122), Expect = 3e-09
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 7/157 (4%)
Frame = +1
Query: 73 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 237
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 238 RIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 411
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 412 SNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
NNG+ + + + + +P D Q C KFG
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFG 167
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 52.8 bits (121), Expect = 4e-09
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Frame = +1
Query: 121 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 279
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 280 LXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKR 444
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 445 LDISTPISMQLDNWPNDMQTCTFKFG 522
+ + ++ +P D Q+C KFG
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFG 177
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 52.4 bits (120), Expect = 5e-09
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 258
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 429
+ W L W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 430 SXIKRLDISTPISMQLDN--WPNDMQTCT 510
+ TP+ + D+ WP D+ CT
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCT 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.6 bits (118), Expect = 9e-09
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLX 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLD 450
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 451 ISTPISMQLDNWPNDMQTCTFKFG 522
+ S+ ++ +P D+QTC K G
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLG 172
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.6 bits (113), Expect = 4e-08
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 273
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 274 KRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 444
RL + S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 445 LDISTPISMQLDNWPNDMQTCTFKFG 522
L I M+L N+P D Q+C G
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILG 181
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 49.6 bits (113), Expect = 4e-08
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 264
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 265 WIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 432
W D L W ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 433 XIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
+ + + +WP D C FG
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFG 188
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 519
+L N A + VS+ G V + + + ++ +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.8 bits (106), Expect = 3e-07
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 268 IDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 420
D RL + G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSXIKRLDISTPISMQLDNWPNDMQTC 507
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.6 bits (103), Expect = 6e-07
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 279
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LXWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 444
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 LDISTPISMQLDNWPNDMQTCTFK 516
+ ++ M L +P D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.6 bits (103), Expect = 6e-07
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 268 IDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 420
D RL + G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSXIKRLDISTPISMQLDNWPNDMQTC 507
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.7 bits (96), Expect = 4e-06
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 279
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 280 LXWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 444
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 LDISTPISMQLDNWPNDMQTCTFK 516
+ ++ M L +P D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +1
Query: 214 IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 393
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 394 ALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCT 510
R R+S +GSV+ R + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 265 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 417
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 418 NGSVSXIKRLDISTPISMQLDNWPNDMQTC 507
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLXW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 XIKRLDISTPISMQLDNWPNDMQTCTF 513
+ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLXW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 XIKRLDISTPISMQLDNWPNDMQTCTF 513
+ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLXW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 XIKRLDISTPISMQLDNWPNDMQTCTF 513
+ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.014
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +1
Query: 175 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAGEWGCSTWLVSSERLWRP 348
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 349 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 513
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.5 bits (63), Expect = 0.043
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLXW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 384
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 385 GDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCT 510
+ ++ + ++ ++ + +L + +M+ +++P+D Q C+
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICS 147
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.13
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 175 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLX-----WNAGEWGCSTWLVSSER 336
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 337 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWPNDMQ 501
LW+PD LNA + AL + S+ N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 502 TC 507
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.8
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQ 501
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 502 TC 507
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 318 PSAAAPLPCVPXQS 277
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,125
Number of Sequences: 438
Number of extensions: 4050
Number of successful extensions: 76
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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