Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J02
(901 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 9e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 52 9e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 2e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 3e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 49 5e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 49 7e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 49 7e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 48 9e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 48 2e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 43 3e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 6e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 7e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.058
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.076
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.94
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 56.0 bits (129), Expect = 4e-10
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Frame = +2
Query: 113 CENATSLSLMID-SLLATCD--RESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 277
C++ TS S + L CD R+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 448
+ W L W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 449 SCIKRLDISTPISMQLDN--WPNDMXTCTFXXGSXMHNSD 562
C+ TP+ + D+ WP D+ CT S H S+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSN 185
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 51.6 bits (118), Expect = 9e-09
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 7/149 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATCDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 286
N +++S ++D+LL D PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSCI 457
+D+RL + G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 458 KRLDISTPISMQLDNWPNDMXTCTFXXGS 544
RL I M L+N+P D C GS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 51.6 bits (118), Expect = 9e-09
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +2
Query: 191 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLW 361
+I N+T+ L + + S + + + + + W D L W ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 362 RPDVVLLNAAATT---AGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTF 532
PD+ + N+ T G V ++GSVSC+ + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 533 XXGSXMHNSDXMD 571
GS +H+ + ++
Sbjct: 186 NFGSWVHSGEEVN 198
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.6 bits (118), Expect = 9e-09
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMD 571
G Y V++NGS + + + + +P D C GS ++ + +D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.6 bits (118), Expect = 9e-09
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMD 571
G Y V++NGS + + + + +P D C GS ++ + +D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMD 571
G Y V++NGS + + + + +P D C GS ++ + +D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMD 571
G Y V+++GS + + M + +P D C GS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.4 bits (115), Expect = 2e-08
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 364
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 365 PDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTF 532
PD+VL N A G+Y + +A V +G V + S+ ++ +P D+ TC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 533 XXGSXMHNSDXMDFR 577
GS ++ +D R
Sbjct: 170 KLGSWTYDGFKVDLR 184
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.4 bits (115), Expect = 2e-08
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 364
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 365 PDVVLL-NAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXG 541
PD+VL NA A +A + + G V + + ++ +P D TC G
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 542 SXMHNSDXMDFR 577
S ++ +D R
Sbjct: 173 SWTYDGFKVDLR 184
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMD 571
G Y V+++GS + + M + +P D C GS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.0 bits (114), Expect = 3e-08
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAATTAGDYALRAR----VSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTF 532
PD+VL N A G+Y +R + + NG V + + ++ + +P D TC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 533 XXGSXMHNSD 562
GS N D
Sbjct: 168 KFGSWTFNGD 177
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 50.0 bits (114), Expect = 3e-08
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +2
Query: 272 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 445
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 446 VSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMDFR 577
V + + ++ +P D TC GS ++ +D R
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.0 bits (114), Expect = 3e-08
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATCDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILAD 271
C + D LL+ +R P S +VV L L L N+++ T +
Sbjct: 15 CHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW-- 72
Query: 272 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGS 445
L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 446 VSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMDFR 577
V + + + +P D TC GS ++ +D +
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQIDLK 176
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMD 571
G Y V+++GS + + + + +P D C GS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMD 571
G Y V+++GS + + + + +P D C GS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMD 571
G Y V+++GS + + + + +P D C GS ++ + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.4 bits (110), Expect = 9e-08
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +2
Query: 272 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 436
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 437 NGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMDFR 577
G VS + + ++ +P D +C GS +N +D +
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLK 189
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 47.6 bits (108), Expect = 2e-07
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +2
Query: 272 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 445
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 446 VSCIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMDFR 577
+ + + + +P D C GS ++ +D +
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ 179
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.6 bits (103), Expect = 6e-07
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Frame = +2
Query: 140 MIDSLLATCDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 298
+ D LL+ +R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 299 LXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKR 463
L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPP 138
Query: 464 LDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMDFR 577
+ + ++ +P D TC GS ++ +D R
Sbjct: 139 AIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVDLR 176
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 43.2 bits (97), Expect = 3e-06
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 8/147 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATCDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 292
++++++++LL + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKR 463
RL + S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 464 LDISTPISMQLDNWPNDMXTCTFXXGS 544
L I M+L N+P D +C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 42.3 bits (95), Expect = 6e-06
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 370
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAAATTAGDYALRAR--VSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXGS 544
+L N A + VS+ G V + + + ++ +P D C S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 545 XMHN 556
++
Sbjct: 152 WTYD 155
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.5 bits (78), Expect = 7e-04
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Frame = +2
Query: 233 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 412
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 413 ALR---ARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCT 529
R R+S +GSV+ R + M L +P D CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.014
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATC---DRESPP-DSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + R PP + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLXW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 CIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMDF 574
+ R + +L+ +P D C+F S + + +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITY 216
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.014
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATC---DRESPP-DSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + R PP + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLXW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 CIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMDF 574
+ R + +L+ +P D C+F S + + +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITY 216
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.014
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATC---DRESPP-DSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + R PP + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLXW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 CIKRLDISTPISMQLDNWPNDMXTCTFXXGSXMHNSDXMDF 574
+ R + +L+ +P D C+F S + + +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITY 216
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.1 bits (62), Expect = 0.058
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 4/131 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAGEWGCSTWLVSSERLWRP 367
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 368 DV--VLLNAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMQLDNWPNDMXTCTFXXG 541
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 542 SXMHNSDXMDF 574
S + + +
Sbjct: 257 SISYEQTAITY 267
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 28.7 bits (61), Expect = 0.076
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSCIKRLDISTPISMQLDNWPNDMX 520
+ +WRPD NA + T + + + ++ + +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 521 TCTFXXGSXMHNSDXMDFR 577
C S H +D M F+
Sbjct: 176 ECKLQMESLSHTTDEMIFQ 194
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.0 bits (52), Expect = 0.94
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSCIKRLDISTPISMQLDNWPND 514
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 515 MXTCTFXXGSXMHNSDXMDFR 577
+ C S ++ + R
Sbjct: 127 IQICPIYIESFSYHKQKLRLR 147
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,264
Number of Sequences: 438
Number of extensions: 4770
Number of successful extensions: 56
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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