Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J01
(867 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 271 7e-73
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 270 1e-72
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 270 1e-72
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 263 3e-70
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 263 3e-70
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 123 3e-28
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 108 8e-24
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 271 bits (665), Expect = 7e-73
Identities = 144/272 (52%), Positives = 174/272 (63%), Gaps = 6/272 (2%)
Frame = +3
Query: 3 LGSSSMSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCF--YRL*GRY 176
L + MSHRKFSAPR +K + P+ + CF Y+ +
Sbjct: 7 LKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTH 66
Query: 177 DPRWLENLTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 356
R + P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 67 IVREADR---PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 123
Query: 357 DCRRRFYKNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLK 536
+CRRRFYKNWYK KKAFTKA KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+K
Sbjct: 124 ECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK 183
Query: 537 QRXXXAHIMEIQLNGGTIXDKXKWATXHLEKPILSILCLPX*ND*LHWC---XKGXGYKG 707
QR AH+MEIQLNGG+I DK KWA HLEKPI + D + C KG G+KG
Sbjct: 184 QRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQ--VSNVFGQDEMIDCVGVTKGKGFKG 241
Query: 708 VTSPWHTXNLPRXKHKGF-KEXCLHWXLGHPS 800
VTS WHT LPR HKG K C+ HPS
Sbjct: 242 VTSRWHTKKLPRKTHKGLRKVACI--GAWHPS 271
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 270 bits (663), Expect = 1e-72
Identities = 143/267 (53%), Positives = 172/267 (64%), Gaps = 6/267 (2%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCF--YRL*GRYDPRWL 191
MSHRKFSAPR +K + P+ + CF Y+ + R
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 192 ENLTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRR 371
+ P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRR
Sbjct: 61 DR---PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRR 117
Query: 372 FYKNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXX 551
FYKNWYK KKAFTKA KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQR
Sbjct: 118 FYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 177
Query: 552 AHIMEIQLNGGTIXDKXKWATXHLEKPILSILCLPX*ND*LHWC---XKGXGYKGVTSPW 722
AH+MEIQLNGG+I DK KWA HLEKPI + D + C KG G+KGVTS W
Sbjct: 178 AHVMEIQLNGGSIEDKVKWAREHLEKPIQ--VSNVFGQDEMIDCVGVTKGKGFKGVTSRW 235
Query: 723 HTXNLPRXKHKGF-KEXCLHWXLGHPS 800
HT LPR HKG K C+ HPS
Sbjct: 236 HTKKLPRKTHKGLRKVACI--GAWHPS 260
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 270 bits (663), Expect = 1e-72
Identities = 143/267 (53%), Positives = 172/267 (64%), Gaps = 6/267 (2%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCF--YRL*GRYDPRWL 191
MSHRKFSAPR +K + P+ + CF Y+ + R
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 192 ENLTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRR 371
+ P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRR
Sbjct: 61 DR---PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRR 117
Query: 372 FYKNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXX 551
FYKNWYK KKAFTKA KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQR
Sbjct: 118 FYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 177
Query: 552 AHIMEIQLNGGTIXDKXKWATXHLEKPILSILCLPX*ND*LHWC---XKGXGYKGVTSPW 722
AH+MEIQLNGG+I DK KWA HLEKPI + D + C KG G+KGVTS W
Sbjct: 178 AHVMEIQLNGGSIEDKVKWAREHLEKPIQ--VSNVFGQDEMIDCVGVTKGKGFKGVTSRW 235
Query: 723 HTXNLPRXKHKGF-KEXCLHWXLGHPS 800
HT LPR HKG K C+ HPS
Sbjct: 236 HTKKLPRKTHKGLRKVACI--GAWHPS 260
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 263 bits (644), Expect = 3e-70
Identities = 127/202 (62%), Positives = 149/202 (73%), Gaps = 4/202 (1%)
Frame = +3
Query: 207 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 386
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 109
Query: 387 YKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXXAHIME 566
YK KKAFTKA KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQR AH+ME
Sbjct: 110 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Query: 567 IQLNGGTIXDKXKWATXHLEKPILSILCLPX*ND*LHWC---XKGXGYKGVTSPWHTXNL 737
IQLNGG+I DK KWA HLEKPI + D + C KG G+KGVTS WHT L
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQ--VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 227
Query: 738 PRXKHKGF-KEXCLHWXLGHPS 800
PR HKG K C+ HPS
Sbjct: 228 PRKTHKGLRKVACI--GAWHPS 247
Score = 87.4 bits (207), Expect = 2e-17
Identities = 38/42 (90%), Positives = 38/42 (90%)
Frame = +1
Query: 58 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTH 42
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 263 bits (644), Expect = 3e-70
Identities = 127/202 (62%), Positives = 149/202 (73%), Gaps = 4/202 (1%)
Frame = +3
Query: 207 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 386
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNW
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNW 109
Query: 387 YKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXXAHIME 566
YK KKAFTKA KW D+LG+KSI DF M+RYC V+RVIAH+Q++L+KQR AH+ME
Sbjct: 110 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Query: 567 IQLNGGTIXDKXKWATXHLEKPILSILCLPX*ND*LHWC---XKGXGYKGVTSPWHTXNL 737
IQLNGG+I DK KWA HLEKPI + D + C KG G+KGVTS WHT L
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQ--VSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 227
Query: 738 PRXKHKGF-KEXCLHWXLGHPS 800
PR HKG K C+ HPS
Sbjct: 228 PRKTHKGLRKVACI--GAWHPS 247
Score = 87.4 bits (207), Expect = 2e-17
Identities = 38/42 (90%), Positives = 38/42 (90%)
Frame = +1
Query: 58 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTH 42
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 123 bits (297), Expect = 3e-28
Identities = 64/126 (50%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCF--YRL*GRYDPRWL 191
MSHRKFSAPR +K + P+ + CF Y+ + R
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 192 ENLTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRR 371
+ P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRR
Sbjct: 61 DR---PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRR 117
Query: 372 FYKNWY 389
FYKNWY
Sbjct: 118 FYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 108 bits (260), Expect = 8e-24
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +3
Query: 207 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 383
P SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 50 PGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Score = 87.4 bits (207), Expect = 2e-17
Identities = 38/42 (90%), Positives = 38/42 (90%)
Frame = +1
Query: 58 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTH 42
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,549,012
Number of Sequences: 53049
Number of extensions: 731328
Number of successful extensions: 1561
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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