Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_J01
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 238 3e-63
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 238 3e-63
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 238 3e-63
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 238 3e-63
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 167 9e-42
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 167 9e-42
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 130 2e-30
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 130 2e-30
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.9
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 28 7.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 238 bits (583), Expect = 3e-63
Identities = 127/264 (48%), Positives = 160/264 (60%), Gaps = 3/264 (1%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCFYRL*GRYDPRWLEN 197
MSHRKFSAPR G +K + + P+ + F + +
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMT-HIVRD 59
Query: 198 LTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 377
+ P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 378 KNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXXAH 557
NW K KKAFTK KWQDE G+K I DF + +YCS +RVIAHTQMK+L++R AH
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179
Query: 558 IMEIQLNGGTIXDKXKWATXHLEKPIL--SILCLPX*ND*LHWCXKGXGYKGVTSPWHTX 731
++EIQ+NGGTI K WA HLEK + ++ D + +G G+KGVTS WHT
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTI-GVTRGHGFKGVTSRWHTK 238
Query: 732 NLPRXKHKGF-KEXCLHWXLGHPS 800
LPR HKG K C+ HPS
Sbjct: 239 KLPRKTHKGLRKVACI--GAWHPS 260
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1
Query: 34 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 238 bits (583), Expect = 3e-63
Identities = 127/264 (48%), Positives = 160/264 (60%), Gaps = 3/264 (1%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCFYRL*GRYDPRWLEN 197
MSHRKFSAPR G +K + + P+ + F + +
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMT-HIVRD 59
Query: 198 LTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 377
+ P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 378 KNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXXAH 557
NW K KKAFTK KWQDE G+K I DF + +YCS +RVIAHTQMK+L++R AH
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179
Query: 558 IMEIQLNGGTIXDKXKWATXHLEKPIL--SILCLPX*ND*LHWCXKGXGYKGVTSPWHTX 731
++EIQ+NGGTI K WA HLEK + ++ D + +G G+KGVTS WHT
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTI-GVTRGHGFKGVTSRWHTK 238
Query: 732 NLPRXKHKGF-KEXCLHWXLGHPS 800
LPR HKG K C+ HPS
Sbjct: 239 KLPRKTHKGLRKVACI--GAWHPS 260
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1
Query: 34 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 238 bits (583), Expect = 3e-63
Identities = 127/264 (48%), Positives = 160/264 (60%), Gaps = 3/264 (1%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCFYRL*GRYDPRWLEN 197
MSHRKFSAPR G +K + + P+ + F + +
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMT-HIVRD 59
Query: 198 LTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 377
+ P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 378 KNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXXAH 557
NW K KKAFTK KWQDE G+K I DF + +YCS +RVIAHTQMK+L++R AH
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179
Query: 558 IMEIQLNGGTIXDKXKWATXHLEKPIL--SILCLPX*ND*LHWCXKGXGYKGVTSPWHTX 731
++EIQ+NGGTI K WA HLEK + ++ D + +G G+KGVTS WHT
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTI-GVTRGHGFKGVTSRWHTK 238
Query: 732 NLPRXKHKGF-KEXCLHWXLGHPS 800
LPR HKG K C+ HPS
Sbjct: 239 KLPRKTHKGLRKVACI--GAWHPS 260
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1
Query: 34 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 238 bits (583), Expect = 3e-63
Identities = 127/264 (48%), Positives = 160/264 (60%), Gaps = 3/264 (1%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCFYRL*GRYDPRWLEN 197
MSHRKFSAPR G +K + + P+ + F + +
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMT-HIVRD 59
Query: 198 LTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 377
+ P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 378 KNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXXAH 557
NW K KKAFTK KWQDE G+K I DF + +YCS +RVIAHTQMK+L++R AH
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAH 179
Query: 558 IMEIQLNGGTIXDKXKWATXHLEKPIL--SILCLPX*ND*LHWCXKGXGYKGVTSPWHTX 731
++EIQ+NGGTI K WA HLEK + ++ D + +G G+KGVTS WHT
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTI-GVTRGHGFKGVTSRWHTK 238
Query: 732 NLPRXKHKGF-KEXCLHWXLGHPS 800
LPR HKG K C+ HPS
Sbjct: 239 KLPRKTHKGLRKVACI--GAWHPS 260
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1
Query: 34 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 167 bits (406), Expect = 9e-42
Identities = 85/169 (50%), Positives = 105/169 (62%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCFYRL*GRYDPRWLEN 197
MSHRKFSAPR G +K + + P+ + F + +
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMT-HIVRD 59
Query: 198 LTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 377
+ P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 378 KNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 524
NW K KKAFTK KWQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1
Query: 34 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 687 KGXGYKGVTSPWHTXNLPRXKHKGF-KEXCLHWXLGHPS 800
+G G+KGVTS WHT LPR HKG K C+ HPS
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACI--GAWHPS 212
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 167 bits (406), Expect = 9e-42
Identities = 85/169 (50%), Positives = 105/169 (62%)
Frame = +3
Query: 18 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPERRP*QTCSFDCFYRL*GRYDPRWLEN 197
MSHRKFSAPR G +K + + P+ + F + +
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMT-HIVRD 59
Query: 198 LTVPVSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFY 377
+ P SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 60 VDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFY 119
Query: 378 KNWYKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 524
NW K KKAFTK KWQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 120 SNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1
Query: 34 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 183
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 687 KGXGYKGVTSPWHTXNLPRXKHKGF-KEXCLHWXLGHPS 800
+G G+KGVTS WHT LPR HKG K C+ HPS
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACI--GAWHPS 212
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 130 bits (313), Expect = 2e-30
Identities = 69/141 (48%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Frame = +3
Query: 387 YKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXXAHIME 566
Y+ KAFTK KWQDE G+K I DF + +YCS +RVIAHTQMK+L++R AH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 567 IQLNGGTIXDKXKWATXHLEKPIL--SILCLPX*ND*LHWCXKGXGYKGVTSPWHTXNLP 740
IQ+NGGTI K WA HLEK + ++ D + +G G+KGVTS WHT LP
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTI-GVTRGHGFKGVTSRWHTKKLP 143
Query: 741 RXKHKGF-KEXCLHWXLGHPS 800
R HKG K C+ HPS
Sbjct: 144 RKTHKGLRKVACI--GAWHPS 162
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 34 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 120
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 130 bits (313), Expect = 2e-30
Identities = 69/141 (48%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Frame = +3
Query: 387 YKCXKKAFTKAXXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRXXXAHIME 566
Y+ KAFTK KWQDE G+K I DF + +YCS +RVIAHTQMK+L++R AH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 567 IQLNGGTIXDKXKWATXHLEKPIL--SILCLPX*ND*LHWCXKGXGYKGVTSPWHTXNLP 740
IQ+NGGTI K WA HLEK + ++ D + +G G+KGVTS WHT LP
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTI-GVTRGHGFKGVTSRWHTKKLP 143
Query: 741 RXKHKGF-KEXCLHWXLGHPS 800
R HKG K C+ HPS
Sbjct: 144 RKTHKGLRKVACI--GAWHPS 162
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 34 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 120
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 261 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 389
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 242 GCHHHRDSSDGLCRCCWIH*DPSWTTRSFDCLGGAYV*RLSTSLLQKLVQMQXEGF 409
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,457,326
Number of Sequences: 27780
Number of extensions: 366884
Number of successful extensions: 772
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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