Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_I24
         (855 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027990-1|AAH27990.1|  770|Homo sapiens tetratricopeptide repea...    51   6e-06
AY358762-1|AAQ89122.1|  653|Homo sapiens DRDL5813 protein.             51   6e-06
AL833086-1|CAD89930.1|  462|Homo sapiens hypothetical protein pr...    51   6e-06
AK074095-1|BAB84921.1|  454|Homo sapiens FLJ00166 protein protein.     51   6e-06
AK055984-1|BAB71064.1|  770|Homo sapiens protein ( Homo sapiens ...    51   6e-06

>BC027990-1|AAH27990.1|  770|Homo sapiens tetratricopeptide repeat
           domain 14 protein.
          Length = 770

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
 Frame = +3

Query: 180 LDASLVAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 353
           +D  L+ QS+N HG  L     S        +  +G+          +H     + KR  
Sbjct: 1   MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 60

Query: 354 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLYALMPPFETFLNVDKTARL 530
            +++ +FI K+A  LF  S   D P++S     +     + YA+MPP E F+ +    R 
Sbjct: 61  NIEIQKFISKKADLLFALSWKSDAPATSEINEDS----EDHYAIMPPLEQFMEIPSMDRR 116

Query: 531 XHFFDNVXTGELIIGAV 581
             FF ++  G+++IG +
Sbjct: 117 ELFFRDIERGDIVIGRI 133


>AY358762-1|AAQ89122.1|  653|Homo sapiens DRDL5813 protein.
          Length = 653

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
 Frame = +3

Query: 180 LDASLVAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 353
           +D  L+ QS+N HG  L     S        +  +G+          +H     + KR  
Sbjct: 1   MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 60

Query: 354 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLYALMPPFETFLNVDKTARL 530
            +++ +FI K+A  LF  S   D P++S     +     + YA+MPP E F+ +    R 
Sbjct: 61  NIEIQKFISKKADLLFALSWKSDAPATSEINEDS----EDHYAIMPPLEQFMEIPSMDRR 116

Query: 531 XHFFDNVXTGELIIGAV 581
             FF ++  G+++IG +
Sbjct: 117 ELFFRDIERGDIVIGRI 133


>AL833086-1|CAD89930.1|  462|Homo sapiens hypothetical protein
           protein.
          Length = 462

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
 Frame = +3

Query: 180 LDASLVAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 353
           +D  L+ QS+N HG  L     S        +  +G+          +H     + KR  
Sbjct: 24  MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 83

Query: 354 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLYALMPPFETFLNVDKTARL 530
            +++ +FI K+A  LF  S   D P++S     +     + YA+MPP E F+ +    R 
Sbjct: 84  NIEIQKFISKKADLLFALSWKSDAPATSEINEDS----EDHYAIMPPLEQFMEIPSMDRR 139

Query: 531 XHFFDNVXTGELIIGAV 581
             FF ++  G+++IG +
Sbjct: 140 ELFFRDIERGDIVIGRI 156


>AK074095-1|BAB84921.1|  454|Homo sapiens FLJ00166 protein protein.
          Length = 454

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
 Frame = +3

Query: 180 LDASLVAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 353
           +D  L+ QS+N HG  L     S        +  +G+          +H     + KR  
Sbjct: 16  MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 75

Query: 354 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLYALMPPFETFLNVDKTARL 530
            +++ +FI K+A  LF  S   D P++S     +     + YA+MPP E F+ +    R 
Sbjct: 76  NIEIQKFISKKADLLFALSWKSDAPATSEINEDS----EDHYAIMPPLEQFMEIPSMDRR 131

Query: 531 XHFFDNVXTGELIIGAV 581
             FF ++  G+++IG +
Sbjct: 132 ELFFRDIERGDIVIGRI 148


>AK055984-1|BAB71064.1|  770|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31422 fis, clone NT2NE2000384, weakly similar to
           MICRONUCLEAR LINKER HISTONE POLYPROTEIN. ).
          Length = 770

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
 Frame = +3

Query: 180 LDASLVAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 353
           +D  L+ QS+N HG  L     S        +  +G+          +H     + KR  
Sbjct: 1   MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 60

Query: 354 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLYALMPPFETFLNVDKTARL 530
            +++ +FI K+A  LF  S   D P++S     +     + YA+MPP E F+ +    R 
Sbjct: 61  NIEIQKFISKKADLLFALSWKSDAPATSEINEDS----EDHYAIMPPLEQFMEIPSMDRR 116

Query: 531 XHFFDNVXTGELIIGAV 581
             FF ++  G+++IG +
Sbjct: 117 ELFFRDIERGDIVIGRI 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,770,929
Number of Sequences: 237096
Number of extensions: 2082444
Number of successful extensions: 6257
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6252
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)