Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_I24
         (855 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    99   9e-21
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    99   9e-21
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    30   3.5  

>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 98.7 bits (235), Expect = 9e-21
 Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
 Frame = +3

Query: 195 VAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKRLKLHQFI 374
           + Q++ YHGQ LQK W+   G  DL  +G+  +++ VYQ R K+ TFQ+R KRLK+HQF+
Sbjct: 6   IGQALGYHGQPLQKIWDDERGVDDLRLMGLTQVNYGVYQERQKYFTFQERAKRLKMHQFL 65

Query: 375 XKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLY-ALMPPFETFLNV-DKTARLXHFFDN 548
            ++A  L+D +L+ +    S      L+ + N Y   M PFE FLNV DK     H    
Sbjct: 66  ARKATDLYDRTLVANVMEDS------LLAQGNTYMTQMAPFEFFLNVKDKRKGWAHRLSA 119

Query: 549 VXTGELIIGAVINRTASGMML 611
           +  G+ II   + R ASG  L
Sbjct: 120 LKQGD-IIYTQVTRLASGNRL 139



 Score = 33.5 bits (73), Expect = 0.38
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +1

Query: 610 LRVLCTAGPTXRYVXDINVKAFLPV---GNIIQAVDXKNVSRNYLMNDTVCCEVIXVIPX 780
           ++ LCTA P   Y+ DI +KA +     G +   +D +   R+++ ND + CE+  +   
Sbjct: 141 VKPLCTAEPKHAYLADIPIKAVILQDFWGPL--PLDKQGNPRSFVQNDILRCEINNISAD 198

Query: 781 TXKMVCGMKGV 813
           T ++   M G+
Sbjct: 199 TERLSLNMIGM 209


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 98.7 bits (235), Expect = 9e-21
 Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
 Frame = +3

Query: 195 VAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKRLKLHQFI 374
           + Q++ YHGQ LQK W+   G  DL  +G+  +++ VYQ R K+ TFQ+R KRLK+HQF+
Sbjct: 6   IGQALGYHGQPLQKIWDDERGVDDLRLMGLTQVNYGVYQERQKYFTFQERAKRLKMHQFL 65

Query: 375 XKEAGALFDSSLLEDTPSSSTNGTXTLVPEXNLY-ALMPPFETFLNV-DKTARLXHFFDN 548
            ++A  L+D +L+ +    S      L+ + N Y   M PFE FLNV DK     H    
Sbjct: 66  ARKATDLYDRTLVANVMEDS------LLAQGNTYMTQMAPFEFFLNVKDKRKGWAHRLSA 119

Query: 549 VXTGELIIGAVINRTASGMML 611
           +  G+ II   + R ASG  L
Sbjct: 120 LKQGD-IIYTQVTRLASGNRL 139



 Score = 33.5 bits (73), Expect = 0.38
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +1

Query: 610 LRVLCTAGPTXRYVXDINVKAFLPV---GNIIQAVDXKNVSRNYLMNDTVCCEVIXVIPX 780
           ++ LCTA P   Y+ DI +KA +     G +   +D +   R+++ ND + CE+  +   
Sbjct: 141 VKPLCTAEPKHAYLADIPIKAVILQDFWGPL--PLDKQGNPRSFVQNDILRCEINNISAD 198

Query: 781 TXKMVCGMKGV 813
           T ++   M G+
Sbjct: 199 TERLSLNMIGM 209


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = -3

Query: 622 KEPLSIIPDAVLLITAPMISSPVFTLSKKCXNLAVLSTFKNVS-NGGINAYKLXSGTRVS 446
           + PL  + D + L+     S    T  +KC     LS    V  +G +       G    
Sbjct: 135 ESPLEEV-DLIALLKGTDTSHDQPTGEEKCTLEKALSELDGVGEDGDVGVTIEGEGQFEI 193

Query: 445 VPLVDDEGVSSSKEESNKAPAS 380
           + + DDEG SSS++ S K PAS
Sbjct: 194 MEIDDDEGESSSRKASPKVPAS 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,627,499
Number of Sequences: 53049
Number of extensions: 612608
Number of successful extensions: 965
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)