Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_I19
         (967 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021316-1|AAX33464.1|  916|Drosophila melanogaster RE12330p pro...    29   9.6  
AF227213-2|AAF43020.1|  912|Drosophila melanogaster Tara 1B isof...    29   9.6  
AF227213-1|AAF43019.1|  916|Drosophila melanogaster Tara 1A isof...    29   9.6  
AF227212-1|AAF43018.1|  912|Drosophila melanogaster Tara 1B isof...    29   9.6  
AF227211-1|AAF43017.1|  916|Drosophila melanogaster Tara 1A isof...    29   9.6  
AE014297-2169|AAN13701.1|  912|Drosophila melanogaster CG6889-PB...    29   9.6  
AE014297-2168|AAF55288.2|  916|Drosophila melanogaster CG6889-PA...    29   9.6  

>BT021316-1|AAX33464.1|  916|Drosophila melanogaster RE12330p
           protein.
          Length = 916

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 388 SVLPXLATPVQIQVSVPSQIRSTCAGN 308
           S+LP  ATP  + VSVP+   S+ +G+
Sbjct: 769 SILPSAATPTAVPVSVPASSSSSSSGS 795


>AF227213-2|AAF43020.1|  912|Drosophila melanogaster Tara 1B isoform
           protein.
          Length = 912

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 388 SVLPXLATPVQIQVSVPSQIRSTCAGN 308
           S+LP  ATP  + VSVP+   S+ +G+
Sbjct: 765 SILPSAATPTAVPVSVPASSSSSSSGS 791


>AF227213-1|AAF43019.1|  916|Drosophila melanogaster Tara 1A isoform
           protein.
          Length = 916

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 388 SVLPXLATPVQIQVSVPSQIRSTCAGN 308
           S+LP  ATP  + VSVP+   S+ +G+
Sbjct: 769 SILPSAATPTAVPVSVPASSSSSSSGS 795


>AF227212-1|AAF43018.1|  912|Drosophila melanogaster Tara 1B isoform
           protein.
          Length = 912

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 388 SVLPXLATPVQIQVSVPSQIRSTCAGN 308
           S+LP  ATP  + VSVP+   S+ +G+
Sbjct: 765 SILPSAATPTAVPVSVPASSSSSSSGS 791


>AF227211-1|AAF43017.1|  916|Drosophila melanogaster Tara 1A isoform
           protein.
          Length = 916

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 388 SVLPXLATPVQIQVSVPSQIRSTCAGN 308
           S+LP  ATP  + VSVP+   S+ +G+
Sbjct: 769 SILPSAATPTAVPVSVPASSSSSSSGS 795


>AE014297-2169|AAN13701.1|  912|Drosophila melanogaster CG6889-PB,
           isoform B protein.
          Length = 912

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 388 SVLPXLATPVQIQVSVPSQIRSTCAGN 308
           S+LP  ATP  + VSVP+   S+ +G+
Sbjct: 765 SILPSAATPTAVPVSVPASSSSSSSGS 791


>AE014297-2168|AAF55288.2|  916|Drosophila melanogaster CG6889-PA,
           isoform A protein.
          Length = 916

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 388 SVLPXLATPVQIQVSVPSQIRSTCAGN 308
           S+LP  ATP  + VSVP+   S+ +G+
Sbjct: 769 SILPSAATPTAVPVSVPASSSSSSSGS 795


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,943,012
Number of Sequences: 53049
Number of extensions: 339810
Number of successful extensions: 432
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4833091908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)