Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_I18
(873 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 55 7e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 53 3e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 3e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 51 1e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 1e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 48 1e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 3e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 39 5e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 39 5e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.005
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.005
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.005
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.042
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.042
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 28 0.098
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.39
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.8 bits (131), Expect = 2e-10
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMD 561
G Y V++NGS + + + + +P D Q C KFGS + +D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.8 bits (131), Expect = 2e-10
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMD 561
G Y V++NGS + + + + +P D Q C KFGS + +D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMD 561
G Y V++NGS + + + + +P D Q C KFGS + +D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMD 561
G Y V+++GS + + M + +P D Q C KFGS + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 6e-10
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +1
Query: 181 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 354
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 355 PDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 531
PD+VL N A A +A + + G V + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 532 SRMXXSDXMDFR 567
S +D R
Sbjct: 173 SWTYDGFKVDLR 184
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 55.2 bits (127), Expect = 7e-10
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMD 561
G Y V+++GS + + M + +P D Q C KFGS + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 55.2 bits (127), Expect = 7e-10
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 262 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 435
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 436 VSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMDFR 567
V + + ++ +P D QTC KFGS +D R
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMD 561
G Y V+++GS + + + + +P D Q C KFGS + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 54.4 bits (125), Expect = 1e-09
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +1
Query: 181 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 354
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 355 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 522
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 523 KFGS 534
KFGS
Sbjct: 168 KFGS 171
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMD 561
G Y V+++GS + + + + +P D Q C KFGS + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMD 561
G Y V+++GS + + + + +P D Q C KFGS + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 53.6 bits (123), Expect = 2e-09
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = +1
Query: 184 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLW 351
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 352 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 528
PD+VL N A G + +A + G V + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 529 GSRMXXSDXMDFRD*QKNI 585
GS +D + +N+
Sbjct: 164 GSWTYDGIQIDLKHINQNM 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.2 bits (122), Expect = 3e-09
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Frame = +1
Query: 181 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 354
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 355 PDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 522
PD+VL N A G+Y + +A V +G V + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 523 KFGSRMXXSDXMDFR 567
K GS +D R
Sbjct: 170 KLGSWTYDGFKVDLR 184
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 262 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 435
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 436 VSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
+ + + + +P D Q C KFGS
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 51.6 bits (118), Expect = 9e-09
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +1
Query: 262 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 426
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 427 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
G VS + + ++ +P D Q+C KFGS
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 51.2 bits (117), Expect = 1e-08
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +1
Query: 223 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 393
I E + T + + +W+D+RL + G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 394 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
R+ +G V RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 51.2 bits (117), Expect = 1e-08
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Frame = +1
Query: 151 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CST 324
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 325 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDN 492
V SE +W PD+VL N A G+Y + +A + + G V + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 493 WPNDMQTCTFKFGSRMXXSDXMDFR 567
+P D QTC KFGS +D R
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVDLR 176
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +1
Query: 184 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 360
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 361 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
+L N A + VS+ G V + + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.8 bits (106), Expect = 3e-07
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Frame = +1
Query: 166 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLV 333
LP H K VV + +R + E + + + +W D RL + S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 334 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPND 504
ER+WRPD N + + R+S +G + RL I M+L N+P D
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 505 MQTCTFKFGS 534
Q+C GS
Sbjct: 173 RQSCPLILGS 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.4 bits (105), Expect = 3e-07
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +1
Query: 181 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLW 351
+I N+T+ L + + S + + + + + W D L W ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 352 RPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 522
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 523 KFGS 534
FGS
Sbjct: 186 NFGS 189
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 43.2 bits (97), Expect = 3e-06
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Frame = +1
Query: 190 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVV 366
++ L ++H N+ E TV L++ W L W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 367 L--LNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDN--WPNDMQTCTFKFGS 534
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +1
Query: 187 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXWN--AGEWGCSTWLVSSERLWRP 357
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 358 DVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 528
D+ N + + R+ NGSV R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 529 GSRMXXSDXMDF 564
S +D + F
Sbjct: 179 ASYGWTTDDLVF 190
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.1 bits (87), Expect = 5e-05
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +1
Query: 274 WIDKRLXWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 438
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 439 SXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXXSDXMDF 564
R+ ++ M L +P D Q C+ + S +D + F
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +1
Query: 223 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 402
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 403 ALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
R R+S +GSV+ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +1
Query: 274 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 426
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 427 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +1
Query: 274 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 426
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 427 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +1
Query: 274 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 426
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 427 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 32.7 bits (71), Expect = 0.005
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 133 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 306
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 307 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 480
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 481 QLDNWPNDMQTCTFKFGS 534
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 32.7 bits (71), Expect = 0.005
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 133 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 306
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 307 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 480
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 481 QLDNWPNDMQTCTFKFGS 534
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 32.7 bits (71), Expect = 0.005
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Frame = +1
Query: 133 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 306
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 307 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 480
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 481 QLDNWPNDMQTCTFKFGS 534
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.042
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +1
Query: 184 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAGEWGCSTWLVSSERLWRP 357
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 358 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 531
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 532 S 534
S
Sbjct: 257 S 257
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.5 bits (63), Expect = 0.042
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = +1
Query: 232 SESTVRILAD--LQMNWIDKRLXW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 399
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 400 YALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 534
++ + ++ ++ + +L + +M+ +++P+D Q C+ S
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIES 152
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 28.3 bits (60), Expect = 0.098
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 340 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQ 510
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 511 TCTFKFGSRMXXSDXMDFR 567
C + S +D M F+
Sbjct: 176 ECKLQMESLSHTTDEMIFQ 194
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.39
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +1
Query: 340 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWPND 504
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 505 MQTC 516
+Q C
Sbjct: 127 IQIC 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,368
Number of Sequences: 438
Number of extensions: 4045
Number of successful extensions: 76
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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