Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_I16
(863 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 3e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 48 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 45 1e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 41 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.010
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.055
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.073
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.13
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 60.9 bits (141), Expect = 1e-11
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 366
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 367 PDVVLLNAAAXTAGDYALRXR----VSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXF 534
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 535 KFGXRMHXSDQ 567
KFG DQ
Sbjct: 168 KFGSWTFNGDQ 178
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRMHXSDQ 567
G Y V++NGS ++ + + + +P D Q C KFG + +Q
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 206
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRMHXSDQ 567
G Y V++NGS ++ + + + +P D Q C KFG + +Q
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 206
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRMHXSDQ 567
G Y V++NGS ++ + + + +P D Q C KFG + +Q
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRMHXSDQ 567
G Y V+++GS ++ + M + +P D Q C KFG + +Q
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRMHXSDQ 567
G Y V+++GS ++ + M + +P D Q C KFG + +Q
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQ 138
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 57.2 bits (132), Expect = 2e-10
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Frame = +1
Query: 196 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 363
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 364 RPDVVLLNAAAXTAGDYALRXRVSN-NGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKF 540
PD+VL N A G + + + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 541 G 543
G
Sbjct: 164 G 164
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRMHXSDQ 567
G Y V+++GS ++ + + + +P D Q C KFG + +Q
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRMHXSDQ 567
G Y V+++GS ++ + + + +P D Q C KFG + +Q
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.0 bits (129), Expect = 4e-10
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 366
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 367 PDVVLLNAAAXTAG-DYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFG 543
PD+VL N A A + + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAXTAG-DYALRXRVSNNGS 447
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A + ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 448 VSWIXRLDITTPXSMQLDXWPXDMQTCXFKFG 543
V W + + ++ +P D QTC KFG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTA 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRMHXSDQ 567
G Y V+++GS ++ + + + +P D Q C KFG + +Q
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 54.4 bits (125), Expect = 1e-09
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-AXTAGDYALRXRVSNNGS 447
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 448 VSWIXRLDITTPXSMQLDXWPXDMQTCXFKFG 543
++ + + + +P D Q C KFG
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFG 167
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.0 bits (124), Expect = 2e-09
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 366
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 367 PDVVLLNAAAXTAGDYAL----RXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXF 534
PD+VL N A G+Y + + V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 535 KFG 543
K G
Sbjct: 170 KLG 172
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 54.0 bits (124), Expect = 2e-09
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAXTAGDYAL----RXRVSN 438
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + + +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 439 NGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFG 543
G VSW + + ++ +P D Q+C KFG
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFG 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.2 bits (122), Expect = 3e-09
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Frame = +1
Query: 163 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 336
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 337 WLVSSERLWRPDVVLLNAAAXTAGDYAL----RXRVSNNGSVSWIXRLDITTPXSMQLDX 504
V SE +W PD+VL N A G+Y + + + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 505 WPXDMQTCXFKFG 543
+P D QTC KFG
Sbjct: 152 FPFDEQTCFMKFG 164
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = +1
Query: 196 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 372
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 373 VVLLNAAAXTAGDYALRXRV--SNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKF 540
+L N A + V S+ G V W+ + + ++ +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 49.6 bits (113), Expect = 4e-08
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Frame = +1
Query: 193 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 363
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 364 RPDVVLLNAAAXT---AGDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXF 534
PD+ + N+ T G V ++GSVS + + + WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 535 KFGXRMHXSDQ 567
FG +H ++
Sbjct: 186 NFGSWVHSGEE 196
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 47.6 bits (108), Expect = 1e-07
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +1
Query: 235 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN---AAAXTA 405
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 406 GDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFG 543
R+ +G V + RL I M L+ +P D Q C +FG
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.6 bits (103), Expect = 6e-07
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Frame = +1
Query: 202 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 378
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 379 L--LNAAAXTAGDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFKFGXRM 552
+ + + ++ V N+G++ + T WP D+ C
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWS 181
Query: 553 HXSDQ 567
H S++
Sbjct: 182 HGSNE 186
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 44.8 bits (101), Expect = 1e-06
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Frame = +1
Query: 178 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV 345
LP H K VV + +R + E + + + +W D RLS+ S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 346 SSERLWRPDVVLLNAAAXTAGDYALRX---RVSNNGSVSWIXRLDITTPXSMQLDXWPXD 516
ER+WRPD N + R+S +G + + RL I M+L +P D
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 517 MQTCXFKFG 543
Q+C G
Sbjct: 173 RQSCPLILG 181
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 2e-06
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Frame = +1
Query: 199 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 369
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 370 DVVLLNAAAXTAGDYALRX---RVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXFK 537
D+ N + + R+ NGSV + R+ +T M L +P D Q C +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.7 bits (91), Expect = 2e-05
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +1
Query: 286 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAAXTAGDYALRX---RVSNNGSV 450
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 451 SWIXRLDITTPXSMQLDXWPXDMQTCXFK 537
+ R+ +T M L +P D Q C +
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = +1
Query: 235 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAXTAGDY 414
I E I L W D+RL+++ E + +E++W PD N D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 415 ALRX---RVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTC 528
R R+S +GSV++ R T M L +P D Q C
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNC 175
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.9 bits (84), Expect = 1e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 286 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRXRVSN 438
W D RL++ G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 439 NGSVSWIXRLDITTPXSMQLDXWPXDMQTC 528
+GS++ RL IT M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.9 bits (84), Expect = 1e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 286 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRXRVSN 438
W D RL++ G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 439 NGSVSWIXRLDITTPXSMQLDXWPXDMQTC 528
+GS++ RL IT M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.9 bits (84), Expect = 1e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 286 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRXRVSN 438
W D RL++ G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 439 NGSVSWIXRLDITTPXSMQLDXWPXDMQTC 528
+GS++ RL IT M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.001
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Frame = +1
Query: 145 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 318
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 319 EWGCSTWLVSSERLWRPDV--VLLNAAAXTAGDYALRXRVSNNGSVSWIXRLDITTPXSM 492
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 493 QLDXWPXDMQTCXF 534
+L+ +P D C F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.7 bits (76), Expect = 0.001
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Frame = +1
Query: 145 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 318
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 319 EWGCSTWLVSSERLWRPDV--VLLNAAAXTAGDYALRXRVSNNGSVSWIXRLDITTPXSM 492
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 493 QLDXWPXDMQTCXF 534
+L+ +P D C F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.7 bits (76), Expect = 0.001
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Frame = +1
Query: 145 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 318
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 319 EWGCSTWLVSSERLWRPDV--VLLNAAAXTAGDYALRXRVSNNGSVSWIXRLDITTPXSM 492
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 493 QLDXWPXDMQTCXF 534
+L+ +P D C F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.5 bits (68), Expect = 0.010
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Frame = +1
Query: 196 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 369
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 370 DV--VLLNAAAXTAGDYALRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTCXF 534
D ++ R+ NG+V+++ R + +L+ +P D C F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.1 bits (62), Expect = 0.055
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 196 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 357
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 358 LWRPDVVLLNAAAXTAGDYALRXRVSN-----NGSVSWIXRLDITTPXSMQLDXWPXDMQ 522
LW+PD LNA AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 523 TC 528
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 28.7 bits (61), Expect = 0.073
Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAAXTAGDYALRXR---VSNNGSVSWIXRLDITTPXSMQLDXWPXDMQ 522
+ +WRPD NA + T + + + ++ ++ +L + +M +P D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 523 TCXFKFGXRMHXSDQ 567
C + H +D+
Sbjct: 176 ECKLQMESLSHTTDE 190
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.9 bits (59), Expect = 0.13
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 358 LWRPDVVLLN--AAAXTAGDYA-LRXRVSNNGSVSWIXRLDITTPXSMQLDXWPXDMQTC 528
+W P V + N ++A T + + + +G V RL T ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 529 XFKFGXRMH 555
F H
Sbjct: 157 PLIFESWTH 165
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 339 PSAAAPFPCVPTQS 298
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,701
Number of Sequences: 438
Number of extensions: 3770
Number of successful extensions: 87
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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