Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_I09
(861 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 336 3e-93
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 325 6e-90
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 295 7e-81
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 281 1e-76
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 233 3e-62
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 126 5e-30
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 87 2e-18
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 71 3e-13
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 29 1.1
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 1.1
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 28 2.0
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 27 3.4
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 4.5
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 26 6.0
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 26 6.0
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 7.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 336 bits (825), Expect = 3e-93
Identities = 159/195 (81%), Positives = 174/195 (89%)
Frame = +3
Query: 195 NRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 374
NRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V
Sbjct: 33 NRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKV 92
Query: 375 VSDGGKPXIXVXYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 554
+S GKP + V YKGE KTF PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFNDSQ
Sbjct: 93 ISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQ 152
Query: 555 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXRNVLIFDLGGGTFDVSILTIED 734
RQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ G NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEE 212
Query: 735 GIFXVKSTAGDTHXG 779
GIF VK+TAGDTH G
Sbjct: 213 GIFEVKATAGDTHLG 227
Score = 50.0 bits (114), Expect = 4e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2
Query: 107 AVGIDLGTTYSCVGVFQHGKVEIIANDQ 190
++GIDLGTTYSCVG F + +VEIIANDQ
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQ 31
Score = 31.5 bits (68), Expect = 0.16
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 778 GGEDFDNXXVNHFVXXFXXNTK 843
GGEDFD+ VNHF+ F K
Sbjct: 227 GGEDFDSRLVNHFIQEFKRKNK 248
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 325 bits (798), Expect = 6e-90
Identities = 154/195 (78%), Positives = 171/195 (87%)
Frame = +3
Query: 195 NRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 374
NRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V
Sbjct: 33 NRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKV 92
Query: 375 VSDGGKPXIXVXYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 554
+ GKP I V +KGE KTF PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFNDSQ
Sbjct: 93 IEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQ 152
Query: 555 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXRNVLIFDLGGGTFDVSILTIED 734
RQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEE 212
Query: 735 GIFXVKSTAGDTHXG 779
GIF VK+TAGDTH G
Sbjct: 213 GIFEVKATAGDTHLG 227
Score = 50.0 bits (114), Expect = 4e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +2
Query: 107 AVGIDLGTTYSCVGVFQHGKVEIIANDQ 190
++GIDLGTTYSCVG F + +VEIIANDQ
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQ 31
Score = 30.3 bits (65), Expect = 0.37
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 778 GGEDFDNXXVNHFVXXFXXNTK 843
GGEDFD+ VNHF F K
Sbjct: 227 GGEDFDSRLVNHFAQEFKRKNK 248
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 295 bits (723), Expect = 7e-81
Identities = 139/200 (69%), Positives = 161/200 (80%)
Frame = +3
Query: 180 PTTSANRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 359
P RTTPS+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KH
Sbjct: 32 PNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKH 91
Query: 360 WPFEVVSDGGKPXIXVXYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 539
WPF+V+ + G P I V Y GE K F +E+S+MVLTKMKE +EA L K V+ AVITVPAY
Sbjct: 92 WPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAY 151
Query: 540 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXRNVLIFDLGGGTFDVSI 719
F+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+
Sbjct: 152 FSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSL 211
Query: 720 LTIEDGIFXVKSTAGDTHXG 779
L I+ G+F V +TAGDTH G
Sbjct: 212 LKIQGGVFEVLATAGDTHLG 231
Score = 46.4 bits (105), Expect = 5e-06
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 107 AVGIDLGTTYSCVGVFQHGKVEIIANDQ 190
A+GIDLGTTYSCV V++ VEII NDQ
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQ 35
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 778 GGEDFDNXXVNHFVXXFXXNTK 843
GGEDFDN V HF+ F K
Sbjct: 231 GGEDFDNALVEHFIQEFKRKQK 252
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 281 bits (688), Expect = 1e-76
Identities = 129/206 (62%), Positives = 166/206 (80%)
Frame = +3
Query: 162 GRWRSSPTTSANRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 341
GR NR TPSYVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+
Sbjct: 55 GRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTM 114
Query: 342 QADMKHWPFEVVSDGGKPXIXVXYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAV 521
D+K +PF +V+D +P + V G+ K F PEE+S+M+L+KMK+TAEAYLGK V +AV
Sbjct: 115 AKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAV 174
Query: 522 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXRNVLIFDLGGG 701
+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T ++++++DLGGG
Sbjct: 175 VTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGG 233
Query: 702 TFDVSILTIEDGIFXVKSTAGDTHXG 779
TFDVS+L+I++G+F V +T+GDTH G
Sbjct: 234 TFDVSLLSIDNGVFEVLATSGDTHLG 259
Score = 50.4 bits (115), Expect = 3e-07
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 110 VGIDLGTTYSCVGVFQHGKVEIIANDQ 190
+GIDLGTTYSCV V ++G+VEIIANDQ
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQ 64
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 233 bits (569), Expect = 3e-62
Identities = 113/195 (57%), Positives = 142/195 (72%), Gaps = 1/195 (0%)
Frame = +3
Query: 198 RTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 374
RTTPS VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++
Sbjct: 82 RTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKI 141
Query: 375 VSDGGKPXIXVXYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 554
V + KT+ P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQ
Sbjct: 142 VEHSNGD---AWLEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQ 198
Query: 555 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXRNVLIFDLGGGTFDVSILTIED 734
RQATK AG I+GLNVLR++NEPTAAA+AYGLDKK V +FDLGGGTFD+SIL + +
Sbjct: 199 RQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKNDAI--VAVFDLGGGTFDISILELNN 256
Query: 735 GIFXVKSTAGDTHXG 779
G+F V+ST GDTH G
Sbjct: 257 GVFEVRSTNGDTHLG 271
Score = 35.9 bits (79), Expect = 0.007
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 98 KAPAVGIDLGTTYSCVGVFQHGKVEIIAN 184
K P +GIDLGTT SC+ + + ++IAN
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIAN 77
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 778 GGEDFDNXXVNHFVXXFXXN 837
GGEDFD V H V F N
Sbjct: 271 GGEDFDVALVRHIVETFKKN 290
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 126 bits (303), Expect = 5e-30
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 5/222 (2%)
Frame = +3
Query: 192 ANRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPF 368
+NR+TPS V++ + R +G+AAK+ A N NT+ KRL GR ++D ++ +
Sbjct: 35 SNRSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISA 94
Query: 369 EVVSDGGKPXIXVXYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFND 548
++ G V Y E+ F ++ + TK+K AEA L +V + VI++PA+F D
Sbjct: 95 KLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTD 154
Query: 549 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK----KGTGXRNVLIFDLGGGTFDVS 716
QR+A +A I+GLN LR++N+ AAA+ YG+ K + R V I D G + VS
Sbjct: 155 IQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVS 214
Query: 717 ILTIEDGIFXVKSTAGDTHXGR*GL*QSXGEPLCPXXXXKYK 842
I+ G F +KST D + G + ++ + KYK
Sbjct: 215 IVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYK 256
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 87.4 bits (207), Expect = 2e-18
Identities = 50/201 (24%), Positives = 105/201 (52%), Gaps = 6/201 (2%)
Frame = +3
Query: 195 NRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 374
NR PS +++ + G A+ Q+ N +N++ + + L+G+ ++ T+ H+
Sbjct: 55 NRQIPSILSYHGDQEYHGVQARGQLVRNADNSVTNFRDLLGKSHDELTLHHC--HYSANP 112
Query: 375 VSDGGKPXIXVXYKGED------KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 536
V+ G+ + + ++ K E S L ++ E+AE +LG V V++VP
Sbjct: 113 VNVEGQIGFKITVQEDEESDPKEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPV 172
Query: 537 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGXRNVLIFDLGGGTFDVS 716
YF D+QR+A + A +GL VL++I++P A +A ++ + V++ + G +VS
Sbjct: 173 YFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVS 232
Query: 717 ILTIEDGIFXVKSTAGDTHXG 779
+++++ G+ + ++ D + G
Sbjct: 233 VVSVKGGLMTILASVHDENLG 253
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 70.5 bits (165), Expect = 3e-13
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Frame = +3
Query: 183 TTSANRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKH 359
T R S VAF ER+ G A N P ++I + K L+ E VQ
Sbjct: 50 TKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSS 109
Query: 360 WPFEVVSDGGKPXIXVXYK-GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 536
+P + + + + + +++ + EE+ +M + AE + + + V+TVP
Sbjct: 110 YPAIQLVENEETTSGISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPP 169
Query: 537 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGXRNVLIFDLGGGTFDV 713
+FN+ QR +A I +VL +I++ A AI Y L + T +I+D G G+
Sbjct: 170 HFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGSGSTSA 229
Query: 714 SILTIE 731
++++ +
Sbjct: 230 TVISFD 235
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 216 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD 383
+ F+D E GD A + P + AK L+G+ + + D P++V+ D
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYD 180
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 102 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTSANRTT 206
HP S W+P LVS+ W +SP S+ RTT
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSP--SSQRTT 315
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 113 GIDLGTTYSCVGVFQHGKVEIIANDQRQQDHSVL 214
G LG TY+ V Q G VE+ D Q H+++
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQRHTLI 1312
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 117 SIWVPRTLALVSSSTGRWRSSPTTSANRTTPS 212
S+ VPR + + ++ W +S T S+N+ TP+
Sbjct: 378 SLSVPRGFSGMLNNNSEWNNSMTMSSNQETPT 409
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 88 QNGKSTRSRNRSGYHVLLRWCLPARE---GGDHRQRPAPTGPLRLMLRSQ 228
+NGK T +R +S + W P++E G+ P P + RSQ
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKERSSNGNSDSASPPPVPRLSITRSQ 526
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 63 QVTRLIKNTKWQK--HPQ*ESIWVPRTLALVSSSTGRWRSSPTTSANRT 203
+V L++N K+ + H + ++ WVP+ ++ + R SP S + T
Sbjct: 508 KVPNLVRNDKFVRLWHKKDDTFWVPKANVFINFISPIARRSPKVSVSTT 556
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3
Query: 817 QSGSPXDCQSPHLPXWVSPAVDFTXKIPSSMVRMDTSKVPPPRSKISTFRXPVP 656
Q SP D +S V+ D +P + + T + PPR K + P+P
Sbjct: 55 QIKSPSDYKSSAHEQRVNHTTDSMAHVPGNNSPLQTPQKSPPRQKHTAPATPIP 108
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2
Query: 197 VGAGRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 84
+ G W SP S + H ++++ +F +RVL C+
Sbjct: 273 IDLGTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,446,737
Number of Sequences: 5004
Number of extensions: 69647
Number of successful extensions: 236
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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