Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_I08
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 299 2e-81
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 299 2e-81
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 299 2e-81
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 299 2e-81
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 254 8e-68
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 254 8e-68
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 99 2e-21
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 99 2e-21
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 299 bits (733), Expect = 2e-81
Identities = 137/229 (59%), Positives = 170/229 (74%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYKC 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XKXAFTKXSXKWQDELGRKSIXKXFXXMIRYCSVVRVIAHTQMKLLKQRQXXAHIMEIQL 590
K AFTK + KWQDE G+K I F + +YCS +RVIAHTQMK+L++RQ AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 591 NGGTIEGQXEMGHTTSGRNLSLSISVFGPXEMIDCXGCHPXAKGXKGVT 737
NGGTIE + + + + + +VF EMID G G KGVT
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGV-TRGHGFKGVT 232
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 299 bits (733), Expect = 2e-81
Identities = 137/229 (59%), Positives = 170/229 (74%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYKC 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XKXAFTKXSXKWQDELGRKSIXKXFXXMIRYCSVVRVIAHTQMKLLKQRQXXAHIMEIQL 590
K AFTK + KWQDE G+K I F + +YCS +RVIAHTQMK+L++RQ AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 591 NGGTIEGQXEMGHTTSGRNLSLSISVFGPXEMIDCXGCHPXAKGXKGVT 737
NGGTIE + + + + + +VF EMID G G KGVT
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGV-TRGHGFKGVT 232
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 299 bits (733), Expect = 2e-81
Identities = 137/229 (59%), Positives = 170/229 (74%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYKC 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XKXAFTKXSXKWQDELGRKSIXKXFXXMIRYCSVVRVIAHTQMKLLKQRQXXAHIMEIQL 590
K AFTK + KWQDE G+K I F + +YCS +RVIAHTQMK+L++RQ AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 591 NGGTIEGQXEMGHTTSGRNLSLSISVFGPXEMIDCXGCHPXAKGXKGVT 737
NGGTIE + + + + + +VF EMID G G KGVT
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGV-TRGHGFKGVT 232
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 299 bits (733), Expect = 2e-81
Identities = 137/229 (59%), Positives = 170/229 (74%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYKC 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XKXAFTKXSXKWQDELGRKSIXKXFXXMIRYCSVVRVIAHTQMKLLKQRQXXAHIMEIQL 590
K AFTK + KWQDE G+K I F + +YCS +RVIAHTQMK+L++RQ AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 591 NGGTIEGQXEMGHTTSGRNLSLSISVFGPXEMIDCXGCHPXAKGXKGVT 737
NGGTIE + + + + + +VF EMID G G KGVT
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGV-TRGHGFKGVT 232
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 254 bits (621), Expect = 8e-68
Identities = 110/163 (67%), Positives = 131/163 (80%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYKC 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XKXAFTKXSXKWQDELGRKSIXKXFXXMIRYCSVVRVIAHTQM 539
K AFTK + KWQDE G+K I F + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 254 bits (621), Expect = 8e-68
Identities = 110/163 (67%), Positives = 131/163 (80%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAXHMSEDCRRRFYKNWYKC 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WA H+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XKXAFTKXSXKWQDELGRKSIXKXFXXMIRYCSVVRVIAHTQM 539
K AFTK + KWQDE G+K I F + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 99 bits (238), Expect = 2e-21
Identities = 52/112 (46%), Positives = 70/112 (62%)
Frame = +3
Query: 402 YKCXKXAFTKXSXKWQDELGRKSIXKXFXXMIRYCSVVRVIAHTQMKLLKQRQXXAHIME 581
Y+ AFTK + KWQDE G+K I F + +YCS +RVIAHTQMK+L++RQ AH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 582 IQLNGGTIEGQXEMGHTTSGRNLSLSISVFGPXEMIDCXGCHPXAKGXKGVT 737
IQ+NGGTIE + + + + + +VF EMID G G KGVT
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGV-TRGHGFKGVT 134
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 137
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 99 bits (238), Expect = 2e-21
Identities = 52/112 (46%), Positives = 70/112 (62%)
Frame = +3
Query: 402 YKCXKXAFTKXSXKWQDELGRKSIXKXFXXMIRYCSVVRVIAHTQMKLLKQRQXXAHIME 581
Y+ AFTK + KWQDE G+K I F + +YCS +RVIAHTQMK+L++RQ AH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 582 IQLNGGTIEGQXEMGHTTSGRNLSLSISVFGPXEMIDCXGCHPXAKGXKGVT 737
IQ+NGGTIE + + + + + +VF EMID G G KGVT
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGV-TRGHGFKGVT 134
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 137
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,836,574
Number of Sequences: 27780
Number of extensions: 351604
Number of successful extensions: 627
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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