Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_I07
(928 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 75 4e-13
BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein. 75 4e-13
BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal recog... 75 4e-13
BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein. 75 4e-13
BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein. 75 4e-13
BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein. 75 4e-13
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 75 4e-13
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 75 4e-13
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 75 4e-13
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 38 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 96
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 97 LNRIENALKTIESANQQTDKLKEL 120
>BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein.
Length = 560
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 90
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 91 LNRIENALKTIESANQQTDKLKEL 114
>BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal
recognition particle 72kDa protein.
Length = 559
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 90
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 91 LNRIENALKTIESANQQTDKLKEL 114
>BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 90
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 91 LNRIENALKTIESANQQTDKLKEL 114
>BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 90
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 91 LNRIENALKTIESANQQTDKLKEL 114
>BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 90
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 91 LNRIENALKTIESANQQTDKLKEL 114
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 90
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 91 LNRIENALKTIESANQQTDKLKEL 114
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 90
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 91 LNRIENALKTIESANQQTDKLKEL 114
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 74.9 bits (176), Expect = 4e-13
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 112 KLQGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAAD-LLFEKAYTQYR 288
K KILQI ++ A HCKVVC +Q +FKEAL + N LA + L FEKAY +YR
Sbjct: 32 KTVNKILQINKDDVTALHCKVVCLIQNGSFKEAL-NVINTHTKVLANNSLSFEKAYCEYR 90
Query: 289 LNSPKEALQTVDSAPELTPALKEL 360
LN + AL+T++SA + T LKEL
Sbjct: 91 LNRIENALKTIESANQQTDKLKEL 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,131,868
Number of Sequences: 237096
Number of extensions: 1356846
Number of successful extensions: 2241
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2240
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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