Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_I07
         (928 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    41   0.001
Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical pr...    34   0.13 
AF003138-5|AAL77178.1|  488|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF003138-4|ABD94108.1|  400|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF003138-3|AAM15568.1|  504|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF003138-2|AAM15567.1|  546|Caenorhabditis elegans Hypothetical ...    29   4.7  
AC006830-8|ABA00186.1|  289|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z66512-9|CAA91328.3|  253|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z48638-12|CAA88573.3|  253|Caenorhabditis elegans Hypothetical p...    28   8.2  

>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 24/81 (29%), Positives = 42/81 (51%)
 Frame = +1

Query: 124 KILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAADLLFEKAYTQYRLNSPK 303
           K+++  P E  AF CK+V  +QL  + +AL  +       +   + FEKAY  YR +   
Sbjct: 34  KLIRKYPKETFAFKCKLVAQIQLSQYADALELIRKTPAHQM-GHVGFEKAYIHYRQDELD 92

Query: 304 EALQTVDSAPELTPALKELRA 366
           EA++ +++  +      EL+A
Sbjct: 93  EAIKELNTCDKDDVKALELKA 113


>Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical
           protein C06H2.7 protein.
          Length = 325

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 184 LQLHNFKEALATLTNAKNSALAADLLFEKAYTQYRLNSPK-EALQTVDSAPELTPALKEL 360
           L +  F E +AT+ N K+  +   LLF +  T +RLN  +  A  T  S P +   + E 
Sbjct: 197 LNIGKFDEMVATVNNIKDLRIRQQLLFFQLITIFRLNIARINASVTAASLPLIVECINEW 256

Query: 361 RA 366
           RA
Sbjct: 257 RA 258


>AF003138-5|AAL77178.1|  488|Caenorhabditis elegans Hypothetical
           protein F12B6.2b protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 143 GAICSILPCSF*SSFIVTALAKFI 72
           G +C+I  CSF  SF++ AL  ++
Sbjct: 222 GCVCAICACSFAQSFVLVALVTYL 245


>AF003138-4|ABD94108.1|  400|Caenorhabditis elegans Hypothetical
           protein F12B6.2d protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 143 GAICSILPCSF*SSFIVTALAKFI 72
           G +C+I  CSF  SF++ AL  ++
Sbjct: 264 GCVCAICACSFAQSFVLVALVTYL 287


>AF003138-3|AAM15568.1|  504|Caenorhabditis elegans Hypothetical
           protein F12B6.2c protein.
          Length = 504

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 143 GAICSILPCSF*SSFIVTALAKFI 72
           G +C+I  CSF  SF++ AL  ++
Sbjct: 222 GCVCAICACSFAQSFVLVALVTYL 245


>AF003138-2|AAM15567.1|  546|Caenorhabditis elegans Hypothetical
           protein F12B6.2a protein.
          Length = 546

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 143 GAICSILPCSF*SSFIVTALAKFI 72
           G +C+I  CSF  SF++ AL  ++
Sbjct: 264 GCVCAICACSFAQSFVLVALVTYL 287


>AC006830-8|ABA00186.1|  289|Caenorhabditis elegans Hypothetical
           protein ZK105.8 protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -2

Query: 171 FAMKCFLLIWCYLQYFALQLLKLFHSHCSGKIYLIQDKPEARLFSLLADIFL 16
           F +  F+L    + YF  Q+L + H H          K  + +FSL+A +F+
Sbjct: 177 FMIFTFVLYCSLILYFYFQILYMLHGHRKFMAAKTYSKHISAMFSLVAQLFV 228


>Z66512-9|CAA91328.3|  253|Caenorhabditis elegans Hypothetical
           protein ZK892.5 protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 171 FAMKCFLLIWCYLQYFALQLLKLF 100
           F  KC LL++  L YFA   LKLF
Sbjct: 84  FTKKCALLVFLTLLYFAAASLKLF 107


>Z48638-12|CAA88573.3|  253|Caenorhabditis elegans Hypothetical
           protein ZK892.5 protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 171 FAMKCFLLIWCYLQYFALQLLKLF 100
           F  KC LL++  L YFA   LKLF
Sbjct: 84  FTKKCALLVFLTLLYFAAASLKLF 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,197,903
Number of Sequences: 27780
Number of extensions: 205143
Number of successful extensions: 454
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)