Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_I04
(864 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 59 6e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 8e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 55 7e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 55 7e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 4e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 4e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 2e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 39 7e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 37 3e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 37 3e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 3e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 35 8e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.010
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.014
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 30 0.032
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.097
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 63.7 bits (148), Expect = 2e-12
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Frame = +3
Query: 171 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 344
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 345 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTF 512
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 513 KFGSRMHNSDXXDFVI--DKRIYSMFD---SRXWDV 605
KFGS N D + +K + D S WD+
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 383
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVI 560
G Y V++NGS ++ + + + +P D Q C KFGS ++ + D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 383
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVI 560
G Y V++NGS ++ + + + +P D Q C KFGS ++ + D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 383
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVI 560
G Y V++NGS ++ + + + +P D Q C KFGS ++ + D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 383
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVI 560
G Y V+++GS ++ + M + +P D Q C KFGS ++ + D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 383
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVI 560
G Y V+++GS ++ + M + +P D Q C KFGS ++ + D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 383
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVI 560
G Y V+++GS ++ + + + +P D Q C KFGS ++ + D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.3 bits (137), Expect = 5e-11
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 171 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 344
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 345 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFG 521
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 522 S 524
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 59.3 bits (137), Expect = 5e-11
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 425
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 426 VSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 524
V W + + ++ +P D QTC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 383
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVI 560
G Y V+++GS ++ + + + +P D Q C KFGS ++ + D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 383
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVI 560
G Y V+++GS ++ + + + +P D Q C KFGS ++ + D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 58.8 bits (136), Expect = 6e-11
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 416
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 417 NGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXD 551
G VSW + + ++ +P D Q+C KFGS +N D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.4 bits (135), Expect = 8e-11
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Frame = +3
Query: 171 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 341
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 342 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTF 512
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 513 KFGSRMHNSDXXDFVIDKRIYSM 581
FGS +H+ + + +DK+ + M
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHM 208
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 57.6 bits (133), Expect = 1e-10
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Frame = +3
Query: 174 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 341
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 342 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKF 518
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 519 GS 524
GS
Sbjct: 164 GS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +3
Query: 171 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 344
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 345 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTF 512
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 513 KFGS 524
K GS
Sbjct: 170 KLGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.2 bits (127), Expect = 7e-10
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Frame = +3
Query: 141 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 314
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 315 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDIXTPISMQLDN 482
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 483 WPNDMQTCTFKFGS 524
+P D QTC KFGS
Sbjct: 152 FPFDEQTCFMKFGS 165
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.2 bits (127), Expect = 7e-10
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 425
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 426 VSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFVIDKR----IYSMFDSR 593
++ + + + +P D Q C KFGS ++ D + I S +
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNG 195
Query: 594 XWDV 605
WD+
Sbjct: 196 EWDL 199
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +3
Query: 174 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 350
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 351 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 524
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.8 bits (121), Expect = 4e-09
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +3
Query: 213 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 383
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 384 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 524
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.6 bits (113), Expect = 4e-08
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Frame = +3
Query: 156 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV 323
LP H K VV + +R + E + + + +W D RLS+ S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 324 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDIXTPISMQLDNWPND 494
ER+WRPD N + + R+S +G + + RL I M+L N+P D
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 495 MQTCTFKFGS 524
Q+C GS
Sbjct: 173 RQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.6 bits (108), Expect = 1e-07
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Frame = +3
Query: 180 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 356
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 357 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISMQLDN--WPNDMQTCTFKFGS 524
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 525 RMHNSD 542
H S+
Sbjct: 180 WSHGSN 185
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 1e-05
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Frame = +3
Query: 177 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 347
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 348 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKF 518
D+ N + + R+ NGSV + R+ + M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 519 GSRMHNSDXXDFV 557
S +D F+
Sbjct: 179 ASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 213 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 392
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 393 ALR---ARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 524
R R+S +GSV++ R M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 38.7 bits (86), Expect = 7e-05
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Frame = +3
Query: 264 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 428
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 429 SWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFV 557
+ R+ + M L +P D Q C+ + S +D F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.7 bits (81), Expect = 3e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 416
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 417 NGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 524
+GS++ RL I M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.7 bits (81), Expect = 3e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 416
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 417 NGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 524
+GS++ RL I M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.7 bits (81), Expect = 3e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 416
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 417 NGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGS 524
+GS++ RL I M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 35.1 bits (77), Expect = 8e-04
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +3
Query: 222 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 389
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 390 YALRAR---VSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFGSRMHNSDXXDFV 557
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.001
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 4/149 (2%)
Frame = +3
Query: 123 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 296
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 297 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 470
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 471 QLDNWPNDMQTCTFKFGSRMHNSDXXDFV 557
+L+ +P D C+F S + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.7 bits (76), Expect = 0.001
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 4/149 (2%)
Frame = +3
Query: 123 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 296
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 297 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 470
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 471 QLDNWPNDMQTCTFKFGSRMHNSDXXDFV 557
+L+ +P D C+F S + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.7 bits (76), Expect = 0.001
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 4/149 (2%)
Frame = +3
Query: 123 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 296
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 297 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 470
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 471 QLDNWPNDMQTCTFKFGSRMHNSDXXDFV 557
+L+ +P D C+F S + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.5 bits (68), Expect = 0.010
Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 4/132 (3%)
Frame = +3
Query: 174 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 347
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 348 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTCTFKFG 521
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 522 SRMHNSDXXDFV 557
S + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 31.1 bits (67), Expect = 0.014
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +3
Query: 330 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDIXTPISMQLDNWPNDMQ 500
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 501 TCTFKFGSRMHNSDXXDFVIDKRIYSMFD 587
C + S H +D F D + + D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWDPDVPLVVD 204
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 29.9 bits (64), Expect = 0.032
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 336 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTC 506
+W P V + N ++A T + + + +G V RL ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 507 TFKFGSRMHN 536
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.097
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 174 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 335
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 336 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDIXTPISMQLDNWPNDMQ 500
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 501 TC 506
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 317 PSAAAPFPCVPTQS 276
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,950
Number of Sequences: 438
Number of extensions: 4086
Number of successful extensions: 90
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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