Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_I01
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein. 217 4e-56
BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita ... 217 4e-56
BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita ... 217 4e-56
AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein. 217 4e-56
AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein. 217 4e-56
AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein. 217 4e-56
AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein. 217 4e-56
BC030601-1|AAH30601.1| 349|Homo sapiens TruB pseudouridine (psi... 46 1e-04
AL355340-1|CAH73219.1| 349|Homo sapiens TruB pseudouridine (psi... 46 1e-04
AK223567-1|BAD97287.1| 349|Homo sapiens TruB pseudouridine (psi... 46 1e-04
AF448144-1|AAL40350.1| 349|Homo sapiens TruB pseudouridine synt... 46 1e-04
BC117309-1|AAI17310.1| 803|Homo sapiens KIAA1324L protein protein. 31 4.1
AK055902-1|BAB71041.1| 493|Homo sapiens protein ( Homo sapiens ... 31 4.1
>U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein.
Length = 514
Score = 217 bits (530), Expect = 4e-56
Identities = 96/130 (73%), Positives = 116/130 (89%)
Frame = +2
Query: 77 VKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVDKPSNPSSH 256
V KLDT+ WPLLLKNFD+LNVRT HYTPL G++PLKR I DY+++GFIN+DKPSNPSSH
Sbjct: 44 VAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSH 103
Query: 257 EVVSWIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAV 436
EVV+WI+RIL+VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV + LH+A+
Sbjct: 104 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 163
Query: 437 ENIQKVTQGL 466
E ++++ L
Sbjct: 164 EGGTQLSRAL 173
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 459 RGLEKLRGALFQRPPLISAVKRQLRVRTVYDSKLLDFDHGQEYWGVLGFSCXGWIXYSGR 638
R LE L GALFQRPPLI+AVKRQLRVRT+Y+SK++++D + G+ SC
Sbjct: 171 RALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYD-PERRLGIFWVSCEAGTYIRTL 229
Query: 639 CVCXXV*XLGVGGXIIXVXR 698
CV + LGVGG + + R
Sbjct: 230 CVHLGL-LLGVGGQMQELRR 248
>BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 217 bits (530), Expect = 4e-56
Identities = 96/130 (73%), Positives = 116/130 (89%)
Frame = +2
Query: 77 VKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVDKPSNPSSH 256
V KLDT+ WPLLLKNFD+LNVRT HYTPL G++PLKR I DY+++GFIN+DKPSNPSSH
Sbjct: 44 VAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSH 103
Query: 257 EVVSWIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAV 436
EVV+WI+RIL+VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV + LH+A+
Sbjct: 104 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 163
Query: 437 ENIQKVTQGL 466
E ++++ L
Sbjct: 164 EGGTQLSRAL 173
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 459 RGLEKLRGALFQRPPLISAVKRQLRVRTVYDSKLLDFDHGQEYWGVLGFSCXGWIXYSGR 638
R LE L GALFQRPPLI+AVKRQLRVRT+Y+SK++++D + G+ SC
Sbjct: 171 RALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYD-PERRLGIFWVSCEAGTYIRTL 229
Query: 639 CVCXXV*XLGVGGXIIXVXR 698
CV + LGVGG + + R
Sbjct: 230 CVHLGL-LLGVGGQMQELRR 248
>BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 217 bits (530), Expect = 4e-56
Identities = 96/130 (73%), Positives = 116/130 (89%)
Frame = +2
Query: 77 VKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVDKPSNPSSH 256
V KLDT+ WPLLLKNFD+LNVRT HYTPL G++PLKR I DY+++GFIN+DKPSNPSSH
Sbjct: 44 VAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSH 103
Query: 257 EVVSWIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAV 436
EVV+WI+RIL+VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV + LH+A+
Sbjct: 104 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 163
Query: 437 ENIQKVTQGL 466
E ++++ L
Sbjct: 164 EGGTQLSRAL 173
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 459 RGLEKLRGALFQRPPLISAVKRQLRVRTVYDSKLLDFDHGQEYWGVLGFSCXGWIXYSGR 638
R LE L GALFQRPPLI+AVKRQLRVRT+Y+SK++++D + G+ SC
Sbjct: 171 RALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYD-PERRLGIFWVSCEAGTYIRTL 229
Query: 639 CVCXXV*XLGVGGXIIXVXR 698
CV + LGVGG + + R
Sbjct: 230 CVHLGL-LLGVGGQMQELRR 248
>AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 217 bits (530), Expect = 4e-56
Identities = 96/130 (73%), Positives = 116/130 (89%)
Frame = +2
Query: 77 VKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVDKPSNPSSH 256
V KLDT+ WPLLLKNFD+LNVRT HYTPL G++PLKR I DY+++GFIN+DKPSNPSSH
Sbjct: 44 VAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSH 103
Query: 257 EVVSWIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAV 436
EVV+WI+RIL+VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV + LH+A+
Sbjct: 104 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 163
Query: 437 ENIQKVTQGL 466
E ++++ L
Sbjct: 164 EGGTQLSRAL 173
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 459 RGLEKLRGALFQRPPLISAVKRQLRVRTVYDSKLLDFDHGQEYWGVLGFSCXGWIXYSGR 638
R LE L GALFQRPPLI+AVKRQLRVRT+Y+SK++++D + G+ SC
Sbjct: 171 RALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYD-PERRLGIFWVSCEAGTYIRTL 229
Query: 639 CVCXXV*XLGVGGXIIXVXR 698
CV + LGVGG + + R
Sbjct: 230 CVHLGL-LLGVGGQMQELRR 248
>AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein.
Length = 524
Score = 217 bits (530), Expect = 4e-56
Identities = 96/130 (73%), Positives = 116/130 (89%)
Frame = +2
Query: 77 VKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVDKPSNPSSH 256
V KLDT+ WPLLLKNFD+LNVRT HYTPL G++PLKR I DY+++GFIN+DKPSNPSSH
Sbjct: 44 VAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSH 103
Query: 257 EVVSWIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAV 436
EVV+WI+RIL+VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV + LH+A+
Sbjct: 104 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 163
Query: 437 ENIQKVTQGL 466
E ++++ L
Sbjct: 164 EGGTQLSRAL 173
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 459 RGLEKLRGALFQRPPLISAVKRQLRVRTVYDSKLLDFDHGQEYWGVLGFSCXGWIXYSGR 638
R LE L GALFQRPPLI+AVKRQLRVRT+Y+SK++++D + G+ SC
Sbjct: 171 RALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYD-PERRLGIFWVSCEAGTYIRTL 229
Query: 639 CVCXXV*XLGVGGXIIXVXR 698
CV + LGVGG + + R
Sbjct: 230 CVHLGL-LLGVGGQMQELRR 248
>AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 217 bits (530), Expect = 4e-56
Identities = 96/130 (73%), Positives = 116/130 (89%)
Frame = +2
Query: 77 VKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVDKPSNPSSH 256
V KLDT+ WPLLLKNFD+LNVRT HYTPL G++PLKR I DY+++GFIN+DKPSNPSSH
Sbjct: 44 VAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSH 103
Query: 257 EVVSWIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAV 436
EVV+WI+RIL+VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV + LH+A+
Sbjct: 104 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 163
Query: 437 ENIQKVTQGL 466
E ++++ L
Sbjct: 164 EGGTQLSRAL 173
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 459 RGLEKLRGALFQRPPLISAVKRQLRVRTVYDSKLLDFDHGQEYWGVLGFSCXGWIXYSGR 638
R LE L GALFQRPPLI+AVKRQLRVRT+Y+SK++++D + G+ SC
Sbjct: 171 RALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYD-PERRLGIFWVSCEAGTYIRTL 229
Query: 639 CVCXXV*XLGVGGXIIXVXR 698
CV + LGVGG + + R
Sbjct: 230 CVHLGL-LLGVGGQMQELRR 248
>AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 217 bits (530), Expect = 4e-56
Identities = 96/130 (73%), Positives = 116/130 (89%)
Frame = +2
Query: 77 VKKLDTAYWPLLLKNFDRLNVRTNHYTPLPFGNSPLKRPISDYVKSGFINVDKPSNPSSH 256
V KLDT+ WPLLLKNFD+LNVRT HYTPL G++PLKR I DY+++GFIN+DKPSNPSSH
Sbjct: 44 VAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSH 103
Query: 257 EVVSWIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAV 436
EVV+WI+RIL+VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV + LH+A+
Sbjct: 104 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 163
Query: 437 ENIQKVTQGL 466
E ++++ L
Sbjct: 164 EGGTQLSRAL 173
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 459 RGLEKLRGALFQRPPLISAVKRQLRVRTVYDSKLLDFDHGQEYWGVLGFSCXGWIXYSGR 638
R LE L GALFQRPPLI+AVKRQLRVRT+Y+SK++++D + G+ SC
Sbjct: 171 RALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYD-PERRLGIFWVSCEAGTYIRTL 229
Query: 639 CVCXXV*XLGVGGXIIXVXR 698
CV + LGVGG + + R
Sbjct: 230 CVHLGL-LLGVGGQMQELRR 248
>BC030601-1|AAH30601.1| 349|Homo sapiens TruB pseudouridine (psi)
synthase homolog 1 (E. coli) protein.
Length = 349
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 269 WIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAVENIQ 448
W KR + K GH GTLD G L+V I T+++ S + K Y A+ L A + +
Sbjct: 104 WTKRKKQTLKIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTAIGELGKATDTLD 163
Query: 449 KVTQGLGEAAWSSIPE 496
+ E + I +
Sbjct: 164 STGRVTEEKPYDKITQ 179
>AL355340-1|CAH73219.1| 349|Homo sapiens TruB pseudouridine (psi)
synthase homolog 1 (E. coli) protein.
Length = 349
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 269 WIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAVENIQ 448
W KR + K GH GTLD G L+V I T+++ S + K Y A+ L A + +
Sbjct: 104 WTKRKKQTLKIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTAIGELGKATDTLD 163
Query: 449 KVTQGLGEAAWSSIPE 496
+ E + I +
Sbjct: 164 STGRVTEEKPYDKITQ 179
>AK223567-1|BAD97287.1| 349|Homo sapiens TruB pseudouridine (psi)
synthase homolog 1 variant protein.
Length = 349
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 269 WIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAVENIQ 448
W KR + K GH GTLD G L+V I T+++ S + K Y A+ L A + +
Sbjct: 104 WTKRKKQTLKIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTAIGELGKATDTLD 163
Query: 449 KVTQGLGEAAWSSIPE 496
+ E + I +
Sbjct: 164 STGRVTEEKPYDKITQ 179
>AF448144-1|AAL40350.1| 349|Homo sapiens TruB pseudouridine
synthase-like protein 1 protein.
Length = 349
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 269 WIKRILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFNLHSAVENIQ 448
W KR + K GH GTLD G L+V I T+++ S + K Y A+ L A + +
Sbjct: 104 WTKRKKQTLKIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTAIGELGKATDTLD 163
Query: 449 KVTQGLGEAAWSSIPE 496
+ E + I +
Sbjct: 164 STGRVTEEKPYDKITQ 179
>BC117309-1|AAI17310.1| 803|Homo sapiens KIAA1324L protein protein.
Length = 803
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 560 PGFRPWTRILGCSGV*LXRLDXIFRTMC 643
PGF+P T + G +G L R+ +F T+C
Sbjct: 268 PGFKPPTSMTGATGSELGRITFVFETLC 295
>AK055902-1|BAB71041.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ31340 fis, clone MESAN1000035, weakly similar to
MAJOR SURFACE-LABELED TROPHOZOITE ANTIGEN PRECURSOR. ).
Length = 493
Score = 31.5 bits (68), Expect = 4.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 560 PGFRPWTRILGCSGV*LXRLDXIFRTMC 643
PGF+P T + G +G L R+ +F T+C
Sbjct: 254 PGFKPPTSMTGATGSELGRITFVFETLC 281
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,200,998
Number of Sequences: 237096
Number of extensions: 2137683
Number of successful extensions: 5407
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5407
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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