Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_H17
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 79 5e-15
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 48 6e-06
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 42 4e-04
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 37 0.021
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 36 0.036
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 36 0.048
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 35 0.063
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 35 0.084
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 32 0.45
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 31 0.78
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 31 1.0
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 31 1.0
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 31 1.4
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 29 3.1
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 29 3.1
AF036687-1|AAM75374.1| 173|Caenorhabditis elegans Hypothetical ... 29 4.2
U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical pr... 29 5.5
U80836-15|AAB37898.1| 264|Caenorhabditis elegans Hypothetical p... 28 7.3
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 28 7.3
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 28 7.3
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 28 9.6
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 28 9.6
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 78.6 bits (185), Expect = 5e-15
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Frame = +2
Query: 230 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 409
V D+L P + +V+G++ ++ FLGCCGAIRE++C+ V++A
Sbjct: 41 VLDILGDERLATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAV 100
Query: 410 XXXFTYGESIKXSIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTDAINYGQF- 586
+ +S + I + + + ++ E+A + + + FECCG T++ ++ F
Sbjct: 101 IIGYALHDSFRLGIGNQLQTGMVRYHESRGVESA---WDKTHQLFECCGVTNSSDWLTFT 157
Query: 587 TLPESCCVKKSILSTFAGNNCTVDAANPAAVPRSASSTTNGTSLXPALLSXVACVEVVGA 766
T+P+SCC+++ + A N + P + ++ + + +A +++VG
Sbjct: 158 TIPDSCCIEE--IEGCARENAPL--FEPGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGV 213
Query: 767 LFALCLPHXI 796
FA CL I
Sbjct: 214 CFACCLSKSI 223
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Frame = +2
Query: 269 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKXS 448
+I IV+GAVM V+A LGCCG S ++ Y+ + +
Sbjct: 115 YIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVE 174
Query: 449 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTDAINYGQF--TLPESCCVK 613
+ D + + + + LQ F CCGN ++ F +P SC ++
Sbjct: 175 LSDALNYMVQHYYQGPG--VVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +2
Query: 269 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKXS 448
WI + VGA++F++ F GCCGA ES ++ + T E S
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128
Query: 449 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNT 562
I + KK S A +Q F+CCG T
Sbjct: 129 IQQ----VLKKSS---ATYELRKNIKPIQNVFQCCGAT 159
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/96 (21%), Positives = 38/96 (39%)
Frame = +2
Query: 269 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKXS 448
W + GA++ ++ + GC GA + + C + + F E IK
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHY 117
Query: 449 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCG 556
+ + + R + A + F +Q +FECCG
Sbjct: 118 VESSMYDTIRNRYSSET--AFKDAFDTVQEKFECCG 151
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 269 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 367
+I IV+GAVM V+A GCCG S ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 35.9 bits (79), Expect = 0.036
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Frame = -2
Query: 465 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNAITNIT 292
PTPS M S +P + T T TM T TTM+ + P K+ T T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 291 APTTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSATTRLKKNSTYFTKLVPHPM 112
PTTMK T + T TP S P + TT ST T P M
Sbjct: 213 TPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 269
Score = 29.5 bits (63), Expect = 3.1
Identities = 36/123 (29%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Frame = -2
Query: 477 LNSTPT-PSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAIT 301
+ STPT P+ ++ +P T T TM T TTM+ + P K+ T
Sbjct: 243 MKSTPTTPTTPTTMKSTP----TTPTTPTTMKSTPTTPTTPTTMK-STPTTPTTMKSTPT 297
Query: 300 NITAPTTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSATTRLKKNSTYFTKLVP 121
T PTTMK T + T TP S P + TT ST T P
Sbjct: 298 TPTTPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 354
Query: 120 HPM 112
M
Sbjct: 355 TTM 357
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 35.5 bits (78), Expect = 0.048
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Frame = +2
Query: 254 LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGE 433
L ++ +V G ++ FLG CGA+ S +++ + Y +
Sbjct: 23 LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKD 82
Query: 434 SIKXSIMDGVGVLFKKRSDANAXEAAEAVFSE----LQRQFECCGNTDAINY 577
+ S+ + V + K + E + +E LQ +CCG+ +Y
Sbjct: 83 KV-YSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDY 133
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 35.1 bits (77), Expect = 0.063
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 269 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 367
++ V G ++ V+AFLGCCGA +E ++ Y+
Sbjct: 84 YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYS 116
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 34.7 bits (76), Expect = 0.084
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 269 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 367
W ++VG + F+I F GC G++RE+ + Y+
Sbjct: 86 WPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYS 118
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -1
Query: 592 QRELAVVDSVSVTAAFELSLQFREDSLGGLVCVSVGSLFE*HADAIHNAXLDALAVGEEE 413
Q E A+ + V +L+L +E+SL ++ SV + E H + LD +
Sbjct: 37 QIENALSEIVGDQPPHDLTLNHKEESLYDMLVASVRAGRESHFELDQ---LDVHTETNQS 93
Query: 412 DADHHLHN-DDHQQEDCVRDDH 350
DHH+HN ++H+ + DH
Sbjct: 94 GHDHHIHNNEEHKHHNMRSHDH 115
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 306 ITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRS-ATTRLK 154
I N+T P+ +IH + +W+ + T Q +N P+P S R+ A+T+ K
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLPESVLARAVASTQTK 402
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 465 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 286
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 285 TTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSAT 166
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 465 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 286
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 285 TTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSAT 166
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 465 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 286
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 285 TTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSAT 166
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 465 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 286
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 285 TTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSAT 166
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/125 (20%), Positives = 44/125 (35%)
Frame = +2
Query: 230 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 409
VK ++T + V WI I +I F+G GA+ S ++ Y
Sbjct: 59 VKSDIRTGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIG 118
Query: 410 XXXFTYGESIKXSIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTDAINYGQFT 589
S++ ++ + V F A+A S ++ CCG + N F
Sbjct: 119 ITVLVKRRSVRRTVKEYVFDSFNMN--------AQADISAFNFRYNCCGAENLPNLNCFA 170
Query: 590 LPESC 604
+C
Sbjct: 171 GQPTC 175
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 418 EEDADHHLHNDDHQQEDCVRDDH 350
EE DHH H+ DH E +R +H
Sbjct: 45 EELHDHHEHDHDHHDEQLIRKNH 67
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 476 KKRSDANAXEAAEAVFSELQRQFECCGNTDAINYGQFTL---PE-SCCVKKSILSTFAGN 643
+ R + ++ E F ++ R C NT +++ + + P+ S ++ ++ +G
Sbjct: 181 RDRQERQILDSQERAFWDVHRPVPGCVNTTEVDFRKLSRSGRPKYSSGGHAALAASTSGI 240
Query: 644 NCTVDAANPAAVPRSASSTTNGTSLXP 724
CT + + AA S ST+NG++ P
Sbjct: 241 GCTQYSQSVAAAHASLPSTSNGSATSP 267
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 476 KKRSDANAXEAAEAVFSELQRQFECCGNTDAINYGQFTL---PE-SCCVKKSILSTFAGN 643
+ R + ++ E F ++ R C NT +++ + + P+ S ++ ++ +G
Sbjct: 181 RDRQERQILDSQERAFWDVHRPVPGCVNTTEVDFRKLSRSGRPKYSSGGHAALAASTSGI 240
Query: 644 NCTVDAANPAAVPRSASSTTNGTSLXP 724
CT + + AA S ST+NG++ P
Sbjct: 241 GCTQYSQSVAAAHASLPSTSNGSATSP 267
>AF036687-1|AAM75374.1| 173|Caenorhabditis elegans Hypothetical
protein C08G9.1 protein.
Length = 173
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 225 VQFIRNXTPIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSXIN 73
VQF++ P RP+ TT + NS+ LV P+ F + + +N
Sbjct: 117 VQFVKQDAQYPIEHRPQPETTYRQNNSSLIVLLVIIPLSVGGFAVCLIFLN 167
>U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical
protein F53A9.8 protein.
Length = 87
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 412 DADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEH 296
D DHH H+D+H ED +H + A D +H
Sbjct: 10 DGDHHDHHDEHHHED--HHEHGADGEHVHHAGDHCDTQH 46
>U80836-15|AAB37898.1| 264|Caenorhabditis elegans Hypothetical
protein B0432.1 protein.
Length = 264
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 659 AANPAAVPRSASSTTNGTSLXPALLSXVACVEVVGALFALCLPHXI 796
+A PAA P ++S T A++ C+E++G +F + H +
Sbjct: 2 SAEPAAAPTNSSLPTEPYMDFQAMMIPGFCLEILGTVFYAAVLHVV 47
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 292 CNVRDRVLGMLWSDTRESLHGRHVR--NLLAGDHHCASGDQRPPLHLRREHQGXHYGWRR 465
C V+D V G+L +D +E + G H R L A + +R ++ H+ R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 466 RAIQK 480
+A++K
Sbjct: 278 KALKK 282
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 292 CNVRDRVLGMLWSDTRESLHGRHVR--NLLAGDHHCASGDQRPPLHLRREHQGXHYGWRR 465
C V+D V G+L +D +E + G H R L A + +R ++ H+ R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 466 RAIQK 480
+A++K
Sbjct: 278 KALKK 282
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 27.9 bits (59), Expect = 9.6
Identities = 34/164 (20%), Positives = 63/164 (38%), Gaps = 22/164 (13%)
Frame = +2
Query: 221 WTMVKDLLKTHLA---VGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXX 388
+ +KD + L + P I I + G + V++F G GA+R++ ++ +A
Sbjct: 54 YLFIKDFREVKLVDIILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSY 113
Query: 389 XXXXXXXXXXFTYGESIKXSIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCG-NTD 565
FT + + +L + + + LQ ECCG ++
Sbjct: 114 ILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLAEIMDALQENLECCGVSSI 173
Query: 566 AINYGQFTL------------PESC-----CVKKSILSTFAGNN 646
A Y + + PE C C +KS++S AG++
Sbjct: 174 AQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAAGSS 217
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 27.9 bits (59), Expect = 9.6
Identities = 34/164 (20%), Positives = 63/164 (38%), Gaps = 22/164 (13%)
Frame = +2
Query: 221 WTMVKDLLKTHLA---VGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXX 388
+ +KD + L + P I I + G + V++F G GA+R++ ++ +A
Sbjct: 78 YLFIKDFREVKLVDIILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSY 137
Query: 389 XXXXXXXXXXFTYGESIKXSIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCG-NTD 565
FT + + +L + + + LQ ECCG ++
Sbjct: 138 ILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLAEIMDALQENLECCGVSSI 197
Query: 566 AINYGQFTL------------PESC-----CVKKSILSTFAGNN 646
A Y + + PE C C +KS++S AG++
Sbjct: 198 AQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAAGSS 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,405,199
Number of Sequences: 27780
Number of extensions: 293140
Number of successful extensions: 1153
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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