Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_H14
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 164 6e-41
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 164 6e-41
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 164 6e-41
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 164 6e-41
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 163 1e-40
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 54 2e-07
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.9
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 164 bits (399), Expect = 6e-41
Identities = 70/115 (60%), Positives = 87/115 (75%)
Frame = +3
Query: 201 LVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCR 380
+VR+ D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ R
Sbjct: 56 IVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEAR 115
Query: 381 RRFYKNWYXCXKXXFTKXTXKWQDELGRKSIXXDFTXMXRYCTVVXVIAHTQMSL 545
RRFY NW K FTK KWQDE G+K I DF + +YC+ + VIAHTQM +
Sbjct: 116 RRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKI 170
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 199
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +1
Query: 595 GTIXDKXKWAXXHLXKPIPCXXCXCPKMX*LTALVXXXXXGXNXVXSRWHPXKLXXXTHX 774
GTI K WA HL K + + + G V SRWH KL TH
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEM-IDTIGVTRGHGFKGVTSRWHTKKLPRKTHK 246
Query: 775 GXXK 786
G K
Sbjct: 247 GLRK 250
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 164 bits (399), Expect = 6e-41
Identities = 70/115 (60%), Positives = 87/115 (75%)
Frame = +3
Query: 201 LVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCR 380
+VR+ D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ R
Sbjct: 56 IVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEAR 115
Query: 381 RRFYKNWYXCXKXXFTKXTXKWQDELGRKSIXXDFTXMXRYCTVVXVIAHTQMSL 545
RRFY NW K FTK KWQDE G+K I DF + +YC+ + VIAHTQM +
Sbjct: 116 RRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKI 170
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 199
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +1
Query: 595 GTIXDKXKWAXXHLXKPIPCXXCXCPKMX*LTALVXXXXXGXNXVXSRWHPXKLXXXTHX 774
GTI K WA HL K + + + G V SRWH KL TH
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEM-IDTIGVTRGHGFKGVTSRWHTKKLPRKTHK 246
Query: 775 GXXK 786
G K
Sbjct: 247 GLRK 250
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 164 bits (399), Expect = 6e-41
Identities = 70/115 (60%), Positives = 87/115 (75%)
Frame = +3
Query: 201 LVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCR 380
+VR+ D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ R
Sbjct: 56 IVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEAR 115
Query: 381 RRFYKNWYXCXKXXFTKXTXKWQDELGRKSIXXDFTXMXRYCTVVXVIAHTQMSL 545
RRFY NW K FTK KWQDE G+K I DF + +YC+ + VIAHTQM +
Sbjct: 116 RRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKI 170
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 199
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +1
Query: 595 GTIXDKXKWAXXHLXKPIPCXXCXCPKMX*LTALVXXXXXGXNXVXSRWHPXKLXXXTHX 774
GTI K WA HL K + + + G V SRWH KL TH
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEM-IDTIGVTRGHGFKGVTSRWHTKKLPRKTHK 246
Query: 775 GXXK 786
G K
Sbjct: 247 GLRK 250
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 164 bits (399), Expect = 6e-41
Identities = 70/115 (60%), Positives = 87/115 (75%)
Frame = +3
Query: 201 LVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCR 380
+VR+ D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ R
Sbjct: 56 IVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEAR 115
Query: 381 RRFYKNWYXCXKXXFTKXTXKWQDELGRKSIXXDFTXMXRYCTVVXVIAHTQMSL 545
RRFY NW K FTK KWQDE G+K I DF + +YC+ + VIAHTQM +
Sbjct: 116 RRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKI 170
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 199
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +1
Query: 595 GTIXDKXKWAXXHLXKPIPCXXCXCPKMX*LTALVXXXXXGXNXVXSRWHPXKLXXXTHX 774
GTI K WA HL K + + + G V SRWH KL TH
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEM-IDTIGVTRGHGFKGVTSRWHTKKLPRKTHK 246
Query: 775 GXXK 786
G K
Sbjct: 247 GLRK 250
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 163 bits (397), Expect = 1e-40
Identities = 70/113 (61%), Positives = 86/113 (76%)
Frame = +3
Query: 201 LVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCR 380
+VR+ D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ R
Sbjct: 56 IVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEAR 115
Query: 381 RRFYKNWYXCXKXXFTKXTXKWQDELGRKSIXXDFTXMXRYCTVVXVIAHTQM 539
RRFY NW K FTK KWQDE G+K I DF + +YC+ + VIAHTQM
Sbjct: 116 RRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 199
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 715 GXNXVXSRWHPXKLXXXTHXGXXK 786
G V SRWH KL TH G K
Sbjct: 179 GFKGVTSRWHTKKLPRKTHKGLRK 202
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 163 bits (397), Expect = 1e-40
Identities = 70/113 (61%), Positives = 86/113 (76%)
Frame = +3
Query: 201 LVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCR 380
+VR+ D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ R
Sbjct: 56 IVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEAR 115
Query: 381 RRFYKNWYXCXKXXFTKXTXKWQDELGRKSIXXDFTXMXRYCTVVXVIAHTQM 539
RRFY NW K FTK KWQDE G+K I DF + +YC+ + VIAHTQM
Sbjct: 116 RRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH 199
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTH 55
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 715 GXNXVXSRWHPXKLXXXTHXGXXK 786
G V SRWH KL TH G K
Sbjct: 179 GFKGVTSRWHTKKLPRKTHKGLRK 202
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3
Query: 423 FTKXTXKWQDELGRKSIXXDFTXMXRYCTVVXVIAHTQMSL 545
FTK KWQDE G+K I DF + +YC+ + VIAHTQM +
Sbjct: 32 FTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKI 72
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +1
Query: 595 GTIXDKXKWAXXHLXKPIPCXXCXCPKMX*LTALVXXXXXGXNXVXSRWHPXKLXXXTHX 774
GTI K WA HL K + + + G V SRWH KL TH
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEM-IDTIGVTRGHGFKGVTSRWHTKKLPRKTHK 148
Query: 775 GXXK 786
G K
Sbjct: 149 GLRK 152
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3
Query: 423 FTKXTXKWQDELGRKSIXXDFTXMXRYCTVVXVIAHTQMSL 545
FTK KWQDE G+K I DF + +YC+ + VIAHTQM +
Sbjct: 32 FTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKI 72
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +1
Query: 595 GTIXDKXKWAXXHLXKPIPCXXCXCPKMX*LTALVXXXXXGXNXVXSRWHPXKLXXXTHX 774
GTI K WA HL K + + + G V SRWH KL TH
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEM-IDTIGVTRGHGFKGVTSRWHTKKLPRKTHK 148
Query: 775 GXXK 786
G K
Sbjct: 149 GLRK 152
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 276 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 404
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,503,932
Number of Sequences: 27780
Number of extensions: 262568
Number of successful extensions: 583
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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