Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_H10
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 187 7e-48
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 38 0.012
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.047
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 28 7.1
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 7.1
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 9.3
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 9.3
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 187 bits (456), Expect = 7e-48
Identities = 84/132 (63%), Positives = 104/132 (78%)
Frame = +2
Query: 59 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRAWEKLVL 238
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++ WEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 239 AARAVVXIENPADVFVISSRPFGQRAVLKFVAHTGATPIAGRFTPGAFTNQIQAAFREPR 418
AARA+ +ENPADV V+S+RP+ QRA+LKF AHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 419 LLIVLDPAQDHQ 454
LL++ DP DHQ
Sbjct: 121 LLVISDPRIDHQ 132
Score = 106 bits (255), Expect = 2e-23
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 5/89 (5%)
Frame = +1
Query: 457 ITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQ 636
+TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LARE+L LRG + R
Sbjct: 134 VTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQT 193
Query: 637 RW-----DVVVDLFFYRDPEXSEKDEQQA 708
+ +++ DL+FYRDP +EK+E A
Sbjct: 194 GFVLEGKEIMPDLYFYRDPTETEKEETGA 222
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +1
Query: 217 CLGKTCSGCSCCRXHREPR*CV--RHLITALRSACCTEVCRAHR-CYAYCG 360
C G C GC CCR PR C R T R+ CCT C R C CG
Sbjct: 79 CCGCGC-GCCCCR----PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 217 CLGKTCSGCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 360
C G GC CC + C R T R+ CCT C R C CG
Sbjct: 75 CGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/99 (28%), Positives = 40/99 (40%)
Frame = +1
Query: 217 CLGKTCSGCSCCRXHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDP 396
C G++ S SCC C+ + +S+C T +C+ +C C T P
Sbjct: 34 CCGRSSS--SCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGP 90
Query: 397 SCIP*TSSLDCIGPCTRPSTITEASYVNIPVIALCNTDS 513
SC S+ C CT P+ I + LCNT S
Sbjct: 91 SCSSCQSA--CSSACTTPTCIRTCQRNSCS--NLCNTGS 125
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 238 GCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 360
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 238 GCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 360
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 238 GCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 360
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 388 PDPSCIP*TSSLDCIGPCTRPSTITEASYV 477
P P CIP + DC P +RPS +T+ ++
Sbjct: 371 PIPYCIP-IQATDCPFPSSRPSKLTKKMFI 399
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 499 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 606
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 471 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 578
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/79 (30%), Positives = 31/79 (39%)
Frame = -2
Query: 610 ASTLHVPTTTTSNQ*SGKTWCCMG*QCPQILVGSLCCTKQSQEC*HMKLQ*WLMVLCRVQ 431
A T VPTTTTS Q C +L + CC + EC + + W V
Sbjct: 105 AETTSVPTTTTSIQ------------CG-VLANTSCCNLKVTECLSKQYEDWRNVTLIKG 151
Query: 430 YNQETRFTECSLDLVSKST 374
Y +E +C L S T
Sbjct: 152 YERELEKCDCVLTSSSTET 170
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 550 TKSSHSIGLMWWLLA 594
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,341,223
Number of Sequences: 27780
Number of extensions: 474880
Number of successful extensions: 1333
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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