Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_H05
         (824 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0373 + 2783596-2784933                                           31   0.84 
09_06_0142 - 21107878-21109104                                         29   4.5  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   4.5  
11_03_0066 + 9529969-9530166,9530271-9530450,9530559-9531287,953...    29   5.9  
05_07_0128 + 27879969-27880143,27880232-27881323,27883562-278836...    28   7.8  

>07_01_0373 + 2783596-2784933
          Length = 445

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -3

Query: 819 EEEKALTKEGMAEAAETXKGTISSMNRS 736
           E+++ LTK G +  +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178


>09_06_0142 - 21107878-21109104
          Length = 408

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 47  IKTNITSQFGPLTCMRLTGEPGTYDDNTDYNIA 145
           I   +   FG L C+ + GEPG Y   T + +A
Sbjct: 259 INRALERHFGDLPCVEVIGEPGRYFAETAFTLA 291


>04_03_0018 -
           9434088-9434141,9434211-9434282,9434968-9435062,
           9435445-9435526,9435610-9435660,9435749-9435829,
           9435965-9436006,9436117-9436215,9438130-9438201,
           9438557-9438680,9438850-9439723,9440274-9440456,
           9440941-9442741,9442825-9443049,9443117-9443814,
           9444519-9444591
          Length = 1541

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 211 ITSTSCSPRLGRRFSTPFSHIQKRV 285
           ITST CSPR     + PFSH    +
Sbjct: 388 ITSTECSPRAELMKTAPFSHFDMEI 412


>11_03_0066 +
           9529969-9530166,9530271-9530450,9530559-9531287,
           9531554-9531706,9531803-9532238,9532322-9532501,
           9532643-9532889,9533090-9533123,9533385-9533489,
           9533833-9533967,9534220-9534399,9534504-9534626
          Length = 899

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = -2

Query: 49  DVAMEVYKMRWNGK 8
           D+AMEVYK+ WNG+
Sbjct: 689 DIAMEVYKIVWNGQ 702


>05_07_0128 +
           27879969-27880143,27880232-27881323,27883562-27883698,
           27884179-27884409,27884707-27884730
          Length = 552

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 358 GQTCVXPRRPNPSRQNSVLPQ*ACCRPLS-RRRFLDSLASRSSDLPERA 501
           G+    PR   P   N VLP  A   PL+  RR L +  S SS   +R+
Sbjct: 142 GRAAALPRASAPPSTNIVLPSAAAAAPLTPPRRHLLAATSSSSSSSDRS 190


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,972,610
Number of Sequences: 37544
Number of extensions: 434785
Number of successful extensions: 1025
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)