Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G23
(937 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 7e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 7e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 7e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 7e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 7e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 2e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 3e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.015
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 28 0.14
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 7.0
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 9.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 9.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 9.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 9.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 9.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 9.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 9.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 9.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 9.2
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 184 STRSSQRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 363
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 364 GCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 486
G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 184 STRSSQRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 363
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 364 GCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 486
G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 445 GDYALRARVSNNGS 486
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.6 bits (103), Expect = 7e-07
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 445 GDYALRARVSNNGS 486
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 7e-07
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 445 GDYALRARVSNNGS 486
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.6 bits (103), Expect = 7e-07
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 445 GDYALRARVSNNGS 486
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 7e-07
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 445 GDYALRARVSNNGS 486
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.6 bits (103), Expect = 7e-07
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 445 GDYALRARVSNNGS 486
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.4 bits (100), Expect = 2e-06
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +1
Query: 232 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 405
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 406 PDVVLL-NAAATTAGDYALRARVSNNGSVSW 495
PD+VL NA A +A + + G V W
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 44.4 bits (100), Expect = 2e-06
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 313 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 486
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 487 VSW 495
V W
Sbjct: 137 VEW 139
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.4 bits (100), Expect = 2e-06
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +1
Query: 199 QRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTW 378
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 379 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 486
L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +1
Query: 235 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCXTWLVSSERLWRPD 411
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 412 VVLLNAAATTAGDYALRAR--VSNNGSVSW 495
+L N A + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 43.6 bits (98), Expect = 3e-06
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +1
Query: 313 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 477
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 478 NGSVSW 495
G VSW
Sbjct: 143 TGDVSW 148
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.2 bits (97), Expect = 3e-06
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Frame = +1
Query: 232 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 405
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 406 PDVVLLNAAATTAGDYALRAR----VSNNGSVSW 495
PD+VL N A G+Y +R + + NG V W
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.2 bits (97), Expect = 3e-06
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 235 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLW 402
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 403 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 495
PD+VL N A G + +A + G V W
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.5 bits (93), Expect = 1e-05
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +1
Query: 232 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 405
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 406 PDVVLLNAAATTAGDYAL----RARVSNNGSVSW 495
PD+VL N A G+Y + +A V +G V W
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.5 bits (93), Expect = 1e-05
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 202 RTIGTPPPHSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CXT 375
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 376 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 495
V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 39.1 bits (87), Expect = 6e-05
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 217 PPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSE 393
P + ++ L ++H N+ E TV L++ W L+W + E+ + V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 394 RLWRPDVVL 420
+W PD+V+
Sbjct: 114 EIWVPDIVM 122
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.9 bits (79), Expect = 5e-04
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +1
Query: 217 PPPHSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VS 387
P +I N+T+ L + + S + + + + + W D LSW ++ ++ V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 388 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWXKALGH 513
S+ +W PD+ + N+ T G V ++GSVS ++ H
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKH 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.1 bits (72), Expect = 0.004
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 274 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLN 426
I E + T + + +W+D+RL++ G+ + R+W+PD N
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 21.8 bits (44), Expect = 9.2
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 503 RLDISTPISMQLDNWPXDMXTC 568
RL I M L+N+P D C
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRC 144
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.015
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 238 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCXTWLVSSERLWRP 408
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 409 DVVLLN 426
D+ N
Sbjct: 119 DLFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 27.9 bits (59), Expect = 0.14
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = +1
Query: 220 PPHSK---IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWLVS 387
P H K VV + +R + E + + + +W D RLS+ +
Sbjct: 54 PTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKM 113
Query: 388 SERLWRPDVVLLN 426
ER+WRPD N
Sbjct: 114 LERIWRPDTYFYN 126
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.2 bits (45), Expect = 7.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 385 TPAKXCSPTPLRSNSVVCRSNSFED 311
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 9.2
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = +1
Query: 235 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCXTWLVSSER 396
++V+ + + N I + R+ ++ +WI+ RL + G+ +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 397 LWRPDVVLLNA 429
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 101 YKSSTFYDN*SIEAIPSPVG-QQGSXIPKP 15
YK +Y+ +IE IP PV G+ P+P
Sbjct: 105 YKKLQYYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 101 YKSSTFYDN*SIEAIPSPVG-QQGSXIPKP 15
YK +Y+ +IE IP PV G+ P+P
Sbjct: 105 YKKLQYYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 101 YKSSTFYDN*SIEAIPSPVG-QQGSXIPKP 15
YK +Y+ +IE IP PV G+ P+P
Sbjct: 105 YKKLQYYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 101 YKSSTFYDN*SIEAIPSPVG-QQGSXIPKP 15
YK +Y+ +IE IP PV G+ P+P
Sbjct: 105 YKKLQYYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 101 YKSSTFYDN*SIEAIPSPVG-QQGSXIPKP 15
YK +Y+ +IE IP PV G+ P+P
Sbjct: 105 YKKLQYYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 101 YKSSTFYDN*SIEAIPSPVG-QQGSXIPKP 15
YK +Y+ +IE IP PV G+ P+P
Sbjct: 105 YKKLQYYNIINIEQIPVPVPIYCGNFPPRP 134
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 101 YKSSTFYDN*SIEAIPSPVG-QQGSXIPKP 15
YK +Y+ +IE IP PV G+ P+P
Sbjct: 109 YKKLQYYNIINIEQIPVPVPIYCGNFPPRP 138
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 101 YKSSTFYDN*SIEAIPSPVG-QQGSXIPKP 15
YK +Y+ +IE IP PV G+ P+P
Sbjct: 105 YKKLQYYNIINIEQIPVPVPIYCGNFPPRP 134
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,584
Number of Sequences: 438
Number of extensions: 3994
Number of successful extensions: 66
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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