Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G19
(869 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 39 0.006
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 37 0.018
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 35 0.074
02_05_0246 + 27136590-27138610,27138933-27139056,27139401-271396... 32 0.11
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 33 0.22
01_01_0595 - 4430738-4430785,4430904-4432679 32 0.69
11_05_0009 - 18349593-18350477 31 0.91
04_03_0856 + 20336390-20336906,20337276-20337397 31 0.91
10_07_0100 + 12861588-12862601 31 1.2
10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706 30 2.1
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101... 30 2.1
12_02_0760 - 22888636-22889407,22889503-22889769,22890001-228903... 30 2.8
06_03_0939 + 26131405-26131596,26132753-26133166 29 3.7
05_06_0279 + 26896997-26897457,26898100-26898220,26898310-268985... 29 3.7
02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162 29 3.7
10_06_0145 + 11215895-11216860 29 4.8
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767... 29 4.8
04_04_0706 + 27419215-27419371,27419521-27419734,27419818-274199... 29 4.8
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 29 4.8
12_02_1217 + 27082452-27083593,27085041-27085158 29 6.4
11_06_0610 - 25449085-25453284 29 6.4
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846... 29 6.4
03_05_0121 + 21013752-21014162,21014274-21015026,21016040-21016444 29 6.4
11_04_0250 + 15335457-15335882 28 8.5
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 28 8.5
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 28 8.5
05_06_0169 + 26121830-26122135 28 8.5
04_03_1017 + 21747044-21748051 28 8.5
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 28 8.5
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 28 8.5
01_03_0086 - 12316010-12316162,12316626-12316712,12316810-123169... 28 8.5
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/86 (31%), Positives = 37/86 (43%)
Frame = +2
Query: 134 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 313
D AKAFD V L L G PD + I++ L + G + G+ Q
Sbjct: 42 DFAKAFDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQ 101
Query: 314 GSALSPLLFSLYINDIPRSPETHLAL 391
G LSP LF L + + R E +L +
Sbjct: 102 GDPLSPYLFILVADVLQRLLERNLQI 127
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 37.1 bits (82), Expect = 0.018
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 125 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 304
L D KAFD + H+ ++ + +MG P + + ++ S S + G G
Sbjct: 454 LKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFSTASSAVLLNGVPGNSFKCRRG 513
Query: 305 VPQGSALSPLLFSL 346
V QG LS LLF L
Sbjct: 514 VRQGVPLSLLLFVL 527
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 35.1 bits (77), Expect = 0.074
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 14/158 (8%)
Frame = +2
Query: 101 RKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRS 280
R+ T + D KAFD V + L L G P+ + I+ LS+ + G
Sbjct: 1046 RRKCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPG 1105
Query: 281 RPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLAL--------------FADDTAIYY 418
R G+ QG LS LF L + + R E + + +ADDT I Y
Sbjct: 1106 RWICCKKGLLQGDPLSSYLFILVADVLQRLLERNTEIRHAIYQDRPCTTIQYADDTLIIY 1165
Query: 419 SCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAV 532
+ +L T+ Q+ + + IN KST +
Sbjct: 1166 RAEEADVL-----ALKETLLQFSKATGLQINFAKSTMI 1198
>02_05_0246 +
27136590-27138610,27138933-27139056,27139401-27139694,
27139776-27139978,27140307-27140589
Length = 974
Score = 31.9 bits (69), Expect(2) = 0.11
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 426 GRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSS-KGGRPPNTXL 569
GRR C F+ + PP S S + + +L+P+ A + GG P T L
Sbjct: 137 GRRACEAFSFKNRAPPRPSSSQASSPSLSPQPAHAAGAVDGGEDPPTRL 185
Score = 21.4 bits (43), Expect(2) = 0.11
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 384 WRSSPMTPPSTTRVG 428
W +SP +PP R G
Sbjct: 93 WTNSPRSPPKVRRDG 107
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Frame = +2
Query: 254 RYRVEGTRSRPRHVTAGVPQGSALSPLLFSL---------YINDIPRSPETHLALFADDT 406
R + GT S P G+ QG LSPLLF L +N R+P +L+ADD
Sbjct: 216 RIDINGTLSDPFKPMRGLRQGDPLSPLLFVLKAMSAGLLDKVNQWSRAPNN--SLYADDA 273
Query: 407 AIYY--SCRKKALL 442
I++ C ++ +L
Sbjct: 274 VIFFKPGCNEEEVL 287
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 267 RERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRR---PIWRSSPMTPPSTTRVGRRR 437
R+ P +S +APPSP+ + +S P +R P SP PPS G R
Sbjct: 209 RDAAVSPSIPAKKSARAPPSPKDTAAPVSVCLPSNKRVMPPFLPPSP--PPSKESDGARV 266
Query: 438 CFIDDFRPQ 464
+ + +PQ
Sbjct: 267 AAVKEAKPQ 275
>11_05_0009 - 18349593-18350477
Length = 294
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 252 SDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG- 428
+++E + +PG ++P R P PR + +S + + IWR SP P+T +G
Sbjct: 57 ANLEPVDELPG--LAEPGVRPNPSRPRSATRSLSPRHV-TKTTIWRDSPARRPTTGELGL 113
Query: 429 --RRRCFIDDFRPQLPP 473
R F DD + PP
Sbjct: 114 LKARILFQDDEKAAPPP 130
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Frame = +3
Query: 387 RSSPMTPPST-TRVGRRRCFIDDFRPQLPPWDSG------SGSGASTLTPRKAQRCSSKG 545
RSSP S TRVGRRR F F P W +G G G ++L A +G
Sbjct: 10 RSSPRGDASAPTRVGRRRAFPLPFASPPPEWPAGKLAGRKDGGGGASLEGAAAGASRRRG 69
Query: 546 G 548
G
Sbjct: 70 G 70
>10_07_0100 + 12861588-12862601
Length = 337
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +3
Query: 297 QPESRKAPPSPRYYSVCISTIYPG-----LRRPIWRSSPMTPPSTTRVGRRR 437
+P +++ SP Y ST P RRP +P TPP+TT R R
Sbjct: 180 RPSAQRPACSPDYPEPACSTAPPSSSSSYARRPCHAKTPRTPPTTTTTARAR 231
>10_08_0826 - 20840445-20840504,20840692-20840778,20841344-20841706
Length = 169
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +3
Query: 237 CRTVRSDIESRERVPGPVTSQPESRKAPPSP---RYYSV-CISTIYPGLRRPIWRSSPMT 404
CRT ES + PG P +AP +P R + V +S L R WR P
Sbjct: 45 CRTPTGG-ESNLKAPGTCPPAPRKPRAPAAPCRKRLFEVEVLSLRLEELERLFWRPPP-- 101
Query: 405 PPSTTR 422
PP TT+
Sbjct: 102 PPPTTQ 107
>07_01_0139 -
1014952-1015165,1015271-1015350,1015420-1015629,
1015925-1016044,1016650-1016709,1017129-1017204,
1018189-1018352,1018428-1018490,1018815-1018902,
1018997-1019647,1019965-1020449
Length = 736
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 562 VFGGRPPF---EEHRCAFRGVNVDAPLPEPLSHGGSCGLKSSMKQ 437
+F G+PP+ E FR ++ D P+P+ LSH G L+ K+
Sbjct: 557 MFNGKPPWSDLEGPAAMFRVLHKDPPIPDNLSHEGKDFLQFCFKR 601
>12_02_0760 -
22888636-22889407,22889503-22889769,22890001-22890302,
22890402-22890512,22890990-22891568,22892026-22892087,
22892434-22892754,22893434-22893776
Length = 918
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 363 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSG 491
P RRP+ P R GRRRC D + PP G+G
Sbjct: 294 PATRRPVLGGRGRPYPRRCRTGRRRCRTDP-SSESPPAKDGAG 335
>06_03_0939 + 26131405-26131596,26132753-26133166
Length = 201
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -2
Query: 520 FRGVNVDAPLPEPLSHGGSCGLKS--SMKQRLLPTRVVDGGVIGEERQ 383
F G++ APLP P + G CG + S+ + P+ ++ G + ++R+
Sbjct: 134 FSGLHYKAPLPRPSAGGHRCGAVATPSVTDEVAPSALLLGHIAPQQRK 181
>05_06_0279 +
26896997-26897457,26898100-26898220,26898310-26898586,
26898735-26898895
Length = 339
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 247 FVPISSRGNAFPAPSRHSRSPARLRPLPVTIQFVYQRYTPVS 372
F+P ++ G+A AP+R R+P R R +P T+ R P++
Sbjct: 53 FLPAAA-GSACEAPARKKRTPGRWRRIPRTLPHPCLRKRPMT 93
>02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162
Length = 213
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +3
Query: 303 ESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPP--W 476
E K P S +V + P LR P SP P+ T V DD RP+LP W
Sbjct: 28 EEEKVPLS----AVIVPDPSPELREPT-SPSPSLAPAPTPVSGAGGGDDDMRPRLPTERW 82
Query: 477 DSGSGSG 497
G G G
Sbjct: 83 RRGGGRG 89
>10_06_0145 + 11215895-11216860
Length = 321
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 204 QTGSCSSYE--TTCRTVRSDIESRERVPGPVTSQPESRKAPPSPR 332
+ G CS E TT +D+ S P P +S + PP+PR
Sbjct: 235 EPGCCSVSEASTTTTADAADVSSTGSSPSPTSSNQAATATPPAPR 279
>05_03_0362 -
12973488-12974251,12975346-12975580,12976410-12976738,
12977277-12977404,12977695-12977879,12977972-12978165,
12978239-12978368,12978507-12978566,12979037-12979059,
12979158-12979218,12979677-12979748,12979804-12979924,
12980351-12980415,12980973-12981089,12981970-12982239
Length = 917
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 204 QTGSCSS-YETTCRTVRSDIESRERVPGPVTSQPES 308
Q+GS SS + + +T SD+ES + +PG V P+S
Sbjct: 881 QSGSGSSHFMQSSKTDDSDVESEDSMPGIVDGDPDS 916
>04_04_0706 +
27419215-27419371,27419521-27419734,27419818-27419913,
27420006-27420123,27420211-27420384,27420633-27420803,
27420932-27420987,27421125-27421214,27421296-27421444,
27421640-27421722,27421830-27421958,27422063-27422137,
27422248-27422416,27422965-27423104,27423191-27423298,
27423603-27423783,27424445-27424542,27424639-27424728,
27424881-27425034,27425376-27425431,27425483-27425533,
27425651-27425732,27425821-27425995,27426748-27426823,
27426951-27427121,27427198-27427269,27427350-27427454,
27427948-27428037,27428703-27428908,27428989-27429190,
27429294-27429473,27429858-27429925,27430005-27430341,
27430428-27430637,27430765-27431448,27431537-27431940,
27432495-27432542,27432777-27433023,27433381-27433602,
27433796-27434026
Length = 2122
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 244 VRQVVSYDEHEPVWHSHVIQFVYQTVVPDFIERLRY 137
V +V Y + HSH+I+ V + F+ER+ Y
Sbjct: 352 VESLVGYSSSDDSCHSHLIEIVETLNIEKFVERIVY 387
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 225 YETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGL 371
Y TT R + + E PG S ESR +PP P Y C S++Y L
Sbjct: 225 YSTTSRRYERFV-ALEEAPG---SYDESRFSPPFPYDYLYCGSSLYGNL 269
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 177 YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSP 329
Y ++ C T +CS E V SD + + G + + R PP P
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDLYGGELEEEDSPRPPPPRP 77
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 6.4
Identities = 28/120 (23%), Positives = 41/120 (34%), Gaps = 4/120 (3%)
Frame = +3
Query: 276 VPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIW-RSSP---MTPPSTTRVGRRRCF 443
+P P S P K+PP+P + P P +SSP +PP
Sbjct: 703 MPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPT 762
Query: 444 IDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGGRPPNTXLSXPLPDXARX*PXPAXSP 623
+++ P P +P K+ + PP + S P P P P SP
Sbjct: 763 PEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSP 822
Score = 28.3 bits (60), Expect = 8.5
Identities = 32/135 (23%), Positives = 43/135 (31%), Gaps = 3/135 (2%)
Frame = +3
Query: 270 ERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFID 449
E P P S P + K+PP+P S S P TPPS
Sbjct: 602 EYTPSPPKSTPPAEKSPPTPE--SKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKAS 659
Query: 450 DFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGGRPPNTXLSXPLPDXARX*PXPAXSPIT 629
P P + S ++ T + S+ PP +P + P SP T
Sbjct: 660 SPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPT 719
Query: 630 ---MYDXPIPWGPKG 665
P P P+G
Sbjct: 720 PESEASSPPPPAPEG 734
>05_04_0443 -
21283680-21283940,21284044-21284118,21284620-21284649,
21286744-21287247
Length = 289
Score = 28.7 bits (61), Expect = 6.4
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = +3
Query: 315 APPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGS 494
APPS P P+ S P+ PP + +PQLPP+ S S
Sbjct: 28 APPSAAAVLPARPPSPPRASIPVSSSPPLLPPP----------VAGSKPQLPPFSSSSSV 77
Query: 495 GASTLTPRKAQ---RCSSKG-GRPPNTXLSXPLPDXAR 596
+S+ P + + G G PPNT L+ P+ D +
Sbjct: 78 ASSSSPPLPSSVSVAIAGDGFGPPPNT-LTEPVLDTVK 114
>03_05_0121 + 21013752-21014162,21014274-21015026,21016040-21016444
Length = 522
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = +3
Query: 432 RRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKG---GRPPNTXLSXPLPDXARX* 602
+RC DDF L +GS ++ A +S G RPP L+ L +R
Sbjct: 177 KRCRYDDFSSPLSSPQQSAGSNVLSMDAADAAGAASSGYTSARPPPLDLAGQLAMGSRPV 236
Query: 603 PXPAXSPITMYDXPIPWG 656
A +P + PWG
Sbjct: 237 QLLAATPFSA--PSSPWG 252
>11_04_0250 + 15335457-15335882
Length = 141
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 660 WGPTVWXGRTS*WAXRRG 607
WG +W GRT W R G
Sbjct: 47 WGGAIWMGRTERWCSRTG 64
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 269 GTRSRPRHVTAGVPQGSALSP 331
G RSRPR AG PQ +A SP
Sbjct: 156 GRRSRPRRCLAGRPQATAGSP 176
>07_03_1546 + 27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 28.3 bits (60), Expect = 8.5
Identities = 31/131 (23%), Positives = 45/131 (34%), Gaps = 1/131 (0%)
Frame = +3
Query: 285 PVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQ 464
PV SQP + AP + T PGL+ P P T S G
Sbjct: 839 PVISQPNATPAPVPQQPVKAFTPTNLPGLKNPEQYQQP-TLGSQLYAGAN---------- 887
Query: 465 LPPWDSGSGSGASTLTPRKAQRCSSKGGRPPNTXLSXP-LPDXARX*PXPAXSPITMYDX 641
PP+ SG + + P + RPP + P P P +P M+
Sbjct: 888 -PPYTSGQSTPYQGVPPTTYHQ-----PRPPTQFQTVPTAPPAVSSATVPGTTPSQMFPG 941
Query: 642 PIPWGPKGKYL 674
P+ P +++
Sbjct: 942 PVANNPTSRFM 952
>05_06_0169 + 26121830-26122135
Length = 101
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 483 GSGSGASTLTPRKAQRCSSKGGRPPNTXLSXPLP 584
G GSG + L P + + S+ GGR S P P
Sbjct: 64 GGGSGVAVLPPPRPRGFSASGGRTERLMRSVPSP 97
>04_03_1017 + 21747044-21748051
Length = 335
Score = 28.3 bits (60), Expect = 8.5
Identities = 26/98 (26%), Positives = 34/98 (34%)
Frame = +3
Query: 279 PGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFR 458
P + P+ P R S + P RR S TP S R RR D+
Sbjct: 139 PSRRAASPDYTPESPPRRAASPDYTPASPS-RRAAASSPDYTPESPPR---RRAASPDYS 194
Query: 459 PQLPPWDSGSGSGASTLTPRKAQRCSSKGGRPPNTXLS 572
P PP + S + + PR+A PP S
Sbjct: 195 PSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAAS 232
Score = 28.3 bits (60), Expect = 8.5
Identities = 31/127 (24%), Positives = 40/127 (31%)
Frame = +3
Query: 270 ERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFID 449
E P + P+ + P R S S P R SP TPP RR
Sbjct: 181 ESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPP-------RRAASP 233
Query: 450 DFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGGRPPNTXLSXPLPDXARX*PXPAXSPIT 629
D+ P PP + S PR+A PP + P + P S
Sbjct: 234 DYTPMSPPRRAASPDYTQMTPPRRAASPDYTPSTPPPPRAASPDYTPSTPPSSPLPSAAE 293
Query: 630 MYDXPIP 650
+ P P
Sbjct: 294 SFTVPPP 300
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 134 DIAKAFDKVWHNGLIYKLYNMG-VPDRLVL 220
D+A+AF+ V H G + +YN+G V +R V+
Sbjct: 230 DVAEAFEVVLHKGEVGHVYNIGTVKERRVI 259
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 459 PQLPPWDSGSGSGASTLTPRKAQRCSSKGG--RPPNTXLSXPLPDXARX*PXPAXS 620
P PP +S SGS S +P ++ ++ GG PP + S P P + P P S
Sbjct: 1166 PSAPPTNS-SGSAPSPPSPSQSAPPANTGGGGSPPPSHGSPPAPKAVQSQPAPKRS 1220
>01_03_0086 -
12316010-12316162,12316626-12316712,12316810-12316942,
12317057-12317330,12317588-12317714,12317815-12318071,
12319055-12319139
Length = 371
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +1
Query: 241 EPFVPISSRGNAF----PAPSRHSRSPARLRPLPVTI 339
+P+VPI G + P P SRSP R LP+ +
Sbjct: 20 DPYVPIPDPGGNYGRSKPGPPAPSRSPPTSRNLPIAV 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,974,991
Number of Sequences: 37544
Number of extensions: 556141
Number of successful extensions: 2171
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2163
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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