Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G19
(869 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 123 4e-28
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 123 4e-28
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 122 6e-28
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 113 3e-25
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 113 3e-25
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 113 3e-25
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 113 3e-25
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 113 4e-25
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 111 9e-25
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 110 2e-24
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 109 6e-24
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 108 1e-23
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 108 1e-23
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 107 2e-23
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 107 3e-23
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 106 5e-23
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 106 5e-23
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 106 5e-23
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 106 5e-23
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 106 5e-23
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 102 7e-22
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 70 5e-12
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 60 3e-09
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 54 3e-07
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 53 6e-07
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 40 0.003
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 39 0.010
AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p pro... 31 1.6
AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-P... 31 1.6
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 31 2.1
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 31 2.1
BT021403-1|AAX33551.1| 760|Drosophila melanogaster LD10920p pro... 30 4.8
AF083889-1|AAC32397.1| 760|Drosophila melanogaster putative tum... 30 4.8
AE013599-1906|AAF58236.1| 760|Drosophila melanogaster CG10117-P... 30 4.8
AB221351-1|BAE78509.1| 760|Drosophila melanogaster Tout-velu pr... 30 4.8
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 29 8.3
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 29 8.3
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 29 8.3
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 29 8.3
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 29 8.3
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 29 8.3
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 123 bits (296), Expect = 4e-28
Identities = 54/142 (38%), Positives = 93/142 (65%)
Frame = +2
Query: 119 GALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVT 298
G + DI AFD VWH+GL++KL +G P L+ I++++L++R F + ++S R +
Sbjct: 604 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILN 663
Query: 299 AGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMG 478
AGVPQGS L P LF+++ +DIP++ L+LFADD A+Y + + +++ +Q+ +
Sbjct: 664 AGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELD 723
Query: 479 QWFRKWRIDINPTKSTAVLFKR 544
+++KW+I INP K+ A+ F +
Sbjct: 724 IYYKKWKIKINPNKTNAIFFTK 745
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 123 bits (296), Expect = 4e-28
Identities = 54/142 (38%), Positives = 93/142 (65%)
Frame = +2
Query: 119 GALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVT 298
G + DI AFD VWH+GL++KL +G P L+ I++++L++R F + ++S R +
Sbjct: 552 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILN 611
Query: 299 AGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMG 478
AGVPQGS L P LF+++ +DIP++ L+LFADD A+Y + + +++ +Q+ +
Sbjct: 612 AGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELD 671
Query: 479 QWFRKWRIDINPTKSTAVLFKR 544
+++KW+I INP K+ A+ F +
Sbjct: 672 IYYKKWKIKINPNKTNAIFFTK 693
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 122 bits (294), Expect = 6e-28
Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 8/169 (4%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
HS V QVHRLT+HIL + ++ A+F D+ +AFD+VWH+GLI K+ + P
Sbjct: 556 HSTVEQVHRLTKHILQAFDDKEYC--NAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYG 612
Query: 221 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETH------ 382
+++ YL +R F RV + S PR + AGVPQGS L PLL+S++ D+P H
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRK 672
Query: 383 --LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKS 523
LA +ADD A+ YS R LQ TT+ W ++W + +NP K+
Sbjct: 673 ALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKT 721
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 113 bits (272), Expect = 3e-25
Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 17/183 (9%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H HQ+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L
Sbjct: 156 HGAEHQLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 212
Query: 221 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSPLLFSLYINDIPRS--------- 370
++ +YLSNR+F R++G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 213 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNI 272
Query: 371 --PETH-----LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTA 529
P+ H LA +ADDT I + L Q +W +KW I IN K+
Sbjct: 273 SFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGH 332
Query: 530 VLF 538
+LF
Sbjct: 333 ILF 335
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 113 bits (272), Expect = 3e-25
Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 17/183 (9%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H HQ+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 221 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSPLLFSLYINDIPRS--------- 370
++ +YLSNR+F R++G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNI 719
Query: 371 --PETH-----LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTA 529
P+ H LA +ADDT I + L Q +W +KW I IN K+
Sbjct: 720 SFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGH 779
Query: 530 VLF 538
+LF
Sbjct: 780 ILF 782
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 113 bits (272), Expect = 3e-25
Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 17/183 (9%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H HQ+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 221 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSPLLFSLYINDIPRS--------- 370
++ +YLSNR+F R++G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNI 719
Query: 371 --PETH-----LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTA 529
P+ H LA +ADDT I + L Q +W +KW I IN K+
Sbjct: 720 SFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGH 779
Query: 530 VLF 538
+LF
Sbjct: 780 ILF 782
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 113 bits (272), Expect = 3e-25
Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 17/183 (9%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H HQ+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 221 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSPLLFSLYINDIPRS--------- 370
++ +YLSNR+F R++G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNI 719
Query: 371 --PETH-----LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTA 529
P+ H LA +ADDT I + L Q +W +KW I IN K+
Sbjct: 720 SFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGH 779
Query: 530 VLF 538
+LF
Sbjct: 780 ILF 782
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 113 bits (271), Expect = 4e-25
Identities = 60/167 (35%), Positives = 89/167 (53%)
Frame = +2
Query: 38 RHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLV 217
+H + QV+R+T I R+ A+F D+A+AFD+VW +GL++K+ + +P
Sbjct: 550 KHGTIEQVNRITSEIRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTH 606
Query: 218 LIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFA 397
+++ YL NR F R + + SR + AGVPQGS L P+L++LY D P + FA
Sbjct: 607 KLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFA 666
Query: 398 DDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
DDTAI + L T++ +W WRI IN K V F
Sbjct: 667 DDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 111 bits (268), Expect = 9e-25
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 5/173 (2%)
Frame = +2
Query: 35 ARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRL 214
A H V Q+HR+ E IL + ++ +LF DI +AFD+VWH GL K+ +P
Sbjct: 553 AGHCTVEQLHRVVEQILTAYDSKEYC--NSLFLDIREAFDRVWHIGLQLKI-KQTLPAPY 609
Query: 215 VLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSP-----ET 379
+++ YL R F R S +V AGVPQGS L PLL+ LY +D+P+ ++
Sbjct: 610 FGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKS 669
Query: 380 HLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
LA FADD + Y R + +Q A +W R+W I IN +KS V F
Sbjct: 670 MLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCF 722
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 110 bits (265), Expect = 2e-24
Identities = 59/167 (35%), Positives = 88/167 (52%)
Frame = +2
Query: 38 RHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLV 217
+H + QV+R+T I R+ A+F D+A+AFD+VW +GL++K+ + +P
Sbjct: 550 KHGTIEQVNRITSEIRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTH 606
Query: 218 LIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFA 397
+++ YL N F R + + SR + AGVPQGS L P+L++LY D P + FA
Sbjct: 607 KLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFA 666
Query: 398 DDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
DDTAI + L T++ +W WRI IN K V F
Sbjct: 667 DDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 109 bits (261), Expect = 6e-24
Identities = 64/175 (36%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H Q+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 612 HGTEQQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 668
Query: 221 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP------RSPET 379
I+ YL+NR+F + + G SR + AGVPQGS L PLL+S++ +D+P SP
Sbjct: 669 ILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQ 728
Query: 380 HLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+ L +ADDT + S R + T W KW I +N K+ V+F
Sbjct: 729 RIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIF 783
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 108 bits (259), Expect = 1e-23
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Frame = +2
Query: 38 RHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLV 217
+H Q+HR+ L + K GA F DI +AFD+VWH GL+YK + P +L
Sbjct: 556 QHGTPEQLHRVVNFALEAMEN-KEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLY 612
Query: 218 LIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIP-RSPETH---- 382
L+++ +L R+F V+G +S + + AGVPQGS L P L+S++ +D+P +P T
Sbjct: 613 LVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEE 672
Query: 383 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+A +ADDTA+ + LQ QW W + IN K V F
Sbjct: 673 DVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 727
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 108 bits (259), Expect = 1e-23
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Frame = +2
Query: 38 RHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLV 217
+H Q+HR+ L + K GA F DI +AFD+VWH GL+YK + P +L
Sbjct: 358 QHGTPEQLHRVVNFALEAMEN-KEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLY 414
Query: 218 LIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIP-RSPETH---- 382
L+++ +L R+F V+G +S + + AGVPQGS L P L+S++ +D+P +P T
Sbjct: 415 LVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEE 474
Query: 383 ---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+A +ADDTA+ + LQ QW W + IN K V F
Sbjct: 475 DVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 529
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 107 bits (257), Expect = 2e-23
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H Q+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 600 HGSEQQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 221 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP------RSPET 379
I+ YL+NR+F + + G SR + AGVPQGS L PLL+S++ +D+P SP
Sbjct: 657 ILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTE 716
Query: 380 HLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+ L +ADDT + S R + + W KW I +N K+ V+F
Sbjct: 717 RIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIF 771
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 107 bits (256), Expect = 3e-23
Identities = 57/166 (34%), Positives = 86/166 (51%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H + QV+R+T I R+ A+F D+++AFDKVW +GL++K+ + +P+
Sbjct: 553 HGTIEQVNRITTEIRTAFEYREYCT--AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHK 609
Query: 221 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALFAD 400
+++ YL +R F R S + AGVPQGS L P L+ +Y DIP + ++ FAD
Sbjct: 610 LLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFAD 669
Query: 401 DTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
DTAI R +L + +W WRI +N K V F
Sbjct: 670 DTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTF 715
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 106 bits (254), Expect = 5e-23
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H Q+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 484 HGTEQQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 540
Query: 221 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP------RSPET 379
I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P SP
Sbjct: 541 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTE 600
Query: 380 HLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+ L +ADDT + S R + T W KW I +N K+ V++
Sbjct: 601 RIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 655
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 106 bits (254), Expect = 5e-23
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H Q+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 221 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP------RSPET 379
I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P SP
Sbjct: 657 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTE 716
Query: 380 HLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+ L +ADDT + S R + T W KW I +N K+ V++
Sbjct: 717 RIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 106 bits (254), Expect = 5e-23
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H Q+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 221 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP------RSPET 379
I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P SP
Sbjct: 657 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTE 716
Query: 380 HLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+ L +ADDT + S R + T W KW I +N K+ V++
Sbjct: 717 RIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 106 bits (254), Expect = 5e-23
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H Q+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 562 HGTEQQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 618
Query: 221 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP------RSPET 379
I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P SP
Sbjct: 619 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTE 678
Query: 380 HLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+ L +ADDT + S R + T W KW I +N K+ V++
Sbjct: 679 RIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 733
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 106 bits (254), Expect = 5e-23
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 220
H Q+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 221 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPLLFSLYINDIP------RSPET 379
I+ YL+NR+F + + G SR + AGVPQGS L P+L+S++ +D+P SP
Sbjct: 657 ILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTE 716
Query: 380 HLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 538
+ L +ADDT + S R + T W KW I +N K+ V++
Sbjct: 717 RIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY 771
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 102 bits (244), Expect = 7e-22
Identities = 51/129 (39%), Positives = 77/129 (59%)
Frame = +2
Query: 26 DSXARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVP 205
D A+H + QV+R+T I R+ ALF D+A+AFD+VW +GL++K+ + +P
Sbjct: 87 DFPAKHGAIEQVNRITTEIRTAFEHREYCT--ALFLDVAQAFDRVWLDGLMFKIIQL-LP 143
Query: 206 DRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHL 385
+ +++ YL R F R + S + AGVPQGS L P+L++LY DIP + + +
Sbjct: 144 QNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQLTI 203
Query: 386 ALFADDTAI 412
FADDTAI
Sbjct: 204 FTFADDTAI 212
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 69.7 bits (163), Expect = 5e-12
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Frame = +2
Query: 35 ARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRL 214
+ HS + + R+ L+ + + L D +AFD+V + ++ +L G+ RL
Sbjct: 553 SNHSTMDALLRIQHFASNALSTKNHV--SILATDFERAFDRVGIHAVLCRLERWGIGPRL 610
Query: 215 VLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDI----PRSPETH 382
+I+ +++NRSFR R+ S + G+PQGS LS +LF + I DI R + +
Sbjct: 611 YNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDIY 670
Query: 383 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQW 484
++L+ADD I+ + + + + W
Sbjct: 671 ISLYADDAIIFTKIKNINTVREKFLEILQEINSW 704
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 60.5 bits (140), Expect = 3e-09
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Frame = +2
Query: 134 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVP 310
D+ AF+ ++ + N+GVPD + +I +Y +R Y E G RS V+AGVP
Sbjct: 557 DVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--QVSAGVP 614
Query: 311 QGSALSPLLFSLYINDI-----PRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTM 475
QGS L P+L+++ + I PR E H FADD AI + L A T
Sbjct: 615 QGSVLGPILWNIMYDGILSISKPRGVELH--CFADDVAITAVAKTIPELQDISNVAITAA 672
Query: 476 GQWFRKWRIDINPTKSTAVL 535
+W K + I K+ VL
Sbjct: 673 IEWLEKVGLKIAAHKTEVVL 692
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 53.6 bits (123), Expect = 3e-07
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Frame = +2
Query: 116 TGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHV 295
T + D ++AFD+V + +I +L +++ I++++SNR RV S P +
Sbjct: 570 TSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPL 629
Query: 296 TAGVPQGSALSPLLFSLYINDIPRSPETHLAL----FADDTAIYYSCRKKALLHRRLQTA 463
G+PQGS +S +LF + N + H + +ADD + + K + L
Sbjct: 630 FNGIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNL 689
Query: 464 ATTMGQW 484
+ W
Sbjct: 690 FDDIENW 696
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 52.8 bits (121), Expect = 6e-07
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +2
Query: 191 NMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPLLFSLYINDIPR 367
N P LV IR Y SNR E + RH VT GVPQGS L PLL++ + I R
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLP--CESSEGVFRHQVTGGVPQGSVLGPLLWNTMYDGILR 71
Query: 368 SP---ETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVL 535
P + + FADD A+ + + W +++ P K+ AVL
Sbjct: 72 LPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTKAVL 130
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 40.3 bits (90), Expect = 0.003
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Frame = +2
Query: 134 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQ 313
D++KAFD + H + L G P V +++ +G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 314 GSALSPLLFSLYINDIPRS-PE----------THLALFADDTAIYYSCR 427
G LSP+LF+L ++ + R+ P T+ A FADD ++ R
Sbjct: 542 GDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFAETR 590
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 38.7 bits (86), Expect = 0.010
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Frame = +2
Query: 128 FFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAG 304
F D AFD V + + +L ++G R + + + + S R R GT P VT G
Sbjct: 576 FVDFKGAFDNVEWSAALSRLADLGC--REMGLWQSFFSGRRAVIRSSSGTVEVP--VTRG 631
Query: 305 VPQGSALSPLLFSLYINDIPR--SPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMG 478
PQGS P ++ + ++ + + P L+ +ADD + +A+L + + +
Sbjct: 632 CPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQLMSIVE 691
Query: 479 QWFRKWRIDINPTKSTAVLFK 541
W + ++ +K+ +L K
Sbjct: 692 TWGAEVGDCLSTSKTVIMLLK 712
>AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p
protein.
Length = 555
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 427 EEGVASSTTSDRSYHHGTVVPEVAHRH*PHEKH 525
EEGV+ T S +HH + H H PH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-PA
protein.
Length = 555
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 427 EEGVASSTTSDRSYHHGTVVPEVAHRH*PHEKH 525
EEGV+ T S +HH + H H PH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.1
Identities = 32/130 (24%), Positives = 38/130 (29%), Gaps = 1/130 (0%)
Frame = +3
Query: 279 PGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFR 458
P P P PP P + P + PI P+ PP G
Sbjct: 153 PPPPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPL-PPQKGEHGHHHHHKGSKG 211
Query: 459 PQLPPWDSGSGSGASTLTPRKAQ-RCSSKGGRPPNTXLSXPLPDXARX*PXPAXSPITMY 635
P PP G+G P + PP S P P P P P
Sbjct: 212 PPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPL 271
Query: 636 DXPIPWGPKG 665
P+PW KG
Sbjct: 272 PVPVPWPSKG 281
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 31.1 bits (67), Expect = 2.1
Identities = 32/130 (24%), Positives = 38/130 (29%), Gaps = 1/130 (0%)
Frame = +3
Query: 279 PGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFR 458
P P P PP P + P + PI P+ PP G
Sbjct: 155 PPPPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPL-PPQKGEHGHHHHHKGSKG 213
Query: 459 PQLPPWDSGSGSGASTLTPRKAQ-RCSSKGGRPPNTXLSXPLPDXARX*PXPAXSPITMY 635
P PP G+G P + PP S P P P P P
Sbjct: 214 PPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPL 273
Query: 636 DXPIPWGPKG 665
P+PW KG
Sbjct: 274 PVPVPWPSKG 283
>BT021403-1|AAX33551.1| 760|Drosophila melanogaster LD10920p
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 292 VTGPGTRSLDSISERTVRQVVSYDEHEPVWH---SHVIQFVYQTVVPDFIE 149
V G T DS+SE VR V S P W+ +H+I +Y PD+ E
Sbjct: 151 VLGIDTLDRDSLSEDYVRNVPSRLARLPYWNNGRNHIIFNLYSGTWPDYAE 201
>AF083889-1|AAC32397.1| 760|Drosophila melanogaster putative tumor
suppressor homolog protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 292 VTGPGTRSLDSISERTVRQVVSYDEHEPVWH---SHVIQFVYQTVVPDFIE 149
V G T DS+SE VR V S P W+ +H+I +Y PD+ E
Sbjct: 151 VLGIDTLDRDSLSEDYVRNVPSRLARLPYWNNGRNHIIFNLYSGTWPDYAE 201
>AE013599-1906|AAF58236.1| 760|Drosophila melanogaster CG10117-PA
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 292 VTGPGTRSLDSISERTVRQVVSYDEHEPVWH---SHVIQFVYQTVVPDFIE 149
V G T DS+SE VR V S P W+ +H+I +Y PD+ E
Sbjct: 151 VLGIDTLDRDSLSEDYVRNVPSRLARLPYWNNGRNHIIFNLYSGTWPDYAE 201
>AB221351-1|BAE78509.1| 760|Drosophila melanogaster Tout-velu
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 292 VTGPGTRSLDSISERTVRQVVSYDEHEPVWH---SHVIQFVYQTVVPDFIE 149
V G T DS+SE VR V S P W+ +H+I +Y PD+ E
Sbjct: 151 VLGIDTLDRDSLSEDYVRNVPSRLARLPYWNNGRNHIIFNLYSGTWPDYAE 201
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 673 KYLPLGPHGMGWSYIVMGEXAGXGYXRA*SGRGMLSXVFGGR 548
K+ L P+ W Y+ Y R+ +G G ++ ++GGR
Sbjct: 41 KFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGR 82
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 673 KYLPLGPHGMGWSYIVMGEXAGXGYXRA*SGRGMLSXVFGGR 548
K+ L P+ W Y+ Y R+ +G G ++ ++GGR
Sbjct: 41 KFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGR 82
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 673 KYLPLGPHGMGWSYIVMGEXAGXGYXRA*SGRGMLSXVFGGR 548
K+ L P+ W Y+ Y R+ +G G ++ ++GGR
Sbjct: 41 KFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGR 82
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 673 KYLPLGPHGMGWSYIVMGEXAGXGYXRA*SGRGMLSXVFGGR 548
K+ L P+ W Y+ Y R+ +G G ++ ++GGR
Sbjct: 41 KFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGR 82
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 673 KYLPLGPHGMGWSYIVMGEXAGXGYXRA*SGRGMLSXVFGGR 548
K+ L P+ W Y+ Y R+ +G G ++ ++GGR
Sbjct: 41 KFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGR 82
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 673 KYLPLGPHGMGWSYIVMGEXAGXGYXRA*SGRGMLSXVFGGR 548
K+ L P+ W Y+ Y R+ +G G ++ ++GGR
Sbjct: 41 KFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGR 82
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,746,215
Number of Sequences: 53049
Number of extensions: 874194
Number of successful extensions: 3130
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3069
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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