Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G18
(837 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 41 0.002
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 40 0.003
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 40 0.004
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 40 0.006
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 40 0.006
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 40 0.006
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 38 0.013
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 38 0.013
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 38 0.013
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 38 0.013
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 38 0.013
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 38 0.013
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 38 0.013
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 38 0.013
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 38 0.013
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 38 0.013
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 38 0.017
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 38 0.017
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 38 0.017
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 38 0.017
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 38 0.017
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 38 0.017
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 38 0.017
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 38 0.017
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 38 0.017
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 37 0.039
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 37 0.039
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 37 0.039
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 37 0.039
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 36 0.052
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 36 0.052
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 36 0.052
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 36 0.069
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 36 0.069
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 36 0.069
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 36 0.069
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 36 0.091
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 36 0.091
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 36 0.091
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 36 0.091
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 36 0.091
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 36 0.091
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 35 0.12
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 35 0.12
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 34 0.28
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 34 0.28
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 33 0.64
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 32 1.1
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 32 1.1
AY094937-1|AAM11290.1| 394|Drosophila melanogaster RH54416p pro... 29 6.0
AE014298-3099|AAN09667.1| 388|Drosophila melanogaster CG32521-P... 29 6.0
AE014298-3098|AAF50844.2| 388|Drosophila melanogaster CG32521-P... 29 6.0
BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p pro... 29 7.9
AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA... 29 7.9
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 138 RTIGTPPPHSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEWG-CST 311
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 312 WLVXSERLWRPDVVLLN 362
V SE +W PD+VL N
Sbjct: 99 LHVPSEHIWHPDIVLYN 115
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 40.3 bits (90), Expect = 0.003
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 168 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEWGCSTWL-VXSERLWR 341
K+ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 67 KVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWR 124
Query: 342 PDVVLLN 362
PD+VL N
Sbjct: 125 PDIVLYN 131
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 138 RTIGTPPPHSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEWG-CST 311
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 312 WLVXSERLWRPDVVLLN 362
V SE +W PD+VL N
Sbjct: 99 LHVPSEHIWLPDIVLYN 115
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLN 362
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 59 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 97
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLN 362
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLN 362
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 171 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAXEWGCSTWL-VXSERLW 338
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 339 RPDVVLLN 362
PD+VL N
Sbjct: 128 LPDIVLYN 135
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 171 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAXEWGCSTWL-VXSERLW 338
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 339 RPDVVLLN 362
PD+VL N
Sbjct: 128 LPDIVLYN 135
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 207 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLN 362
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 171 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAXEWGCSTWL-VXSERLW 338
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 339 RPDVVLLN 362
PD+VL N
Sbjct: 128 LPDIVLYN 135
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 38.3 bits (85), Expect = 0.013
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 135 QRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCST 311
+R + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 312 WLVXSERLWRPDVVLLNA 365
+ +LW+PDV++ N+
Sbjct: 104 LRITPNKLWKPDVLMYNS 121
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 38.3 bits (85), Expect = 0.013
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 135 QRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCST 311
+R + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 312 WLVXSERLWRPDVVLLNA 365
+ +LW+PDV++ N+
Sbjct: 104 LRITPNKLWKPDVLMYNS 121
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 171 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAXEWGCSTWL-VXSERLW 338
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 339 RPDVVLLN 362
PD+VL N
Sbjct: 128 LPDIVLYN 135
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 171 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAXEWGCSTWL-VXSERLW 338
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 339 RPDVVLLN 362
PD+VL N
Sbjct: 128 LPDIVLYN 135
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 38.3 bits (85), Expect = 0.013
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 135 QRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCST 311
+R + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 312 WLVXSERLWRPDVVLLNA 365
+ +LW+PDV++ N+
Sbjct: 104 LRITPNKLWKPDVLMYNS 121
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 38.3 bits (85), Expect = 0.013
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 135 QRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCST 311
+R + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 312 WLVXSERLWRPDVVLLNA 365
+ +LW+PDV++ N+
Sbjct: 104 LRITPNKLWKPDVLMYNS 121
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 37.9 bits (84), Expect = 0.017
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 207 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLN 362
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 37.9 bits (84), Expect = 0.017
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 207 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLN 362
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLNA 365
L++ W D L WN+ E+G L + RLW+PDV++ N+
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNS 152
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLNA 365
L++ W D L WN+ E+G L + RLW+PDV++ N+
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNS 152
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLNA 365
L++ W D L WN+ E+G L + RLW+PDV++ N+
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNS 130
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLNA 365
L++ W D L WN+ E+G L + RLW+PDV++ N+
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNS 152
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLNA 365
L++ W D L WN+ E+G L + RLW+PDV++ N+
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNS 152
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLNA 365
L++ W D L WN+ E+G L + RLW+PDV++ N+
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNS 133
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 37.9 bits (84), Expect = 0.017
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 207 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLN 362
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 36.7 bits (81), Expect = 0.039
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLN 362
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 63 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 101
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 36.7 bits (81), Expect = 0.039
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLN 362
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 36.7 bits (81), Expect = 0.039
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLN 362
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 36.7 bits (81), Expect = 0.039
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEWGCSTWL-VXSERLWRPDVVLLN 362
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.052
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 207 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
N+ E + L + W D L WN E+ G + +LW+PDV++ N+
Sbjct: 83 NLDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNS 136
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 36.3 bits (80), Expect = 0.052
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 78 VRQNAKTQHHCPS*STRSSQRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQM 257
+R ++ + + + SS + + HS I + + L+L E + L++
Sbjct: 263 LRSSSSSSSNSSNSGNSSSTQILNGLNKHSWIFLLIYLNLSD----EKNQLLVTNVWLKL 318
Query: 258 NWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
W D L WN ++ G + R+W+PDV++ N+
Sbjct: 319 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNS 355
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.052
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 207 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
N+ E + L + W D L WN E+ G + +LW+PDV++ N+
Sbjct: 83 NLDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNS 136
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.069
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L++ W D L WN ++ G + R+W+PDV++ N+
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNS 404
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 35.9 bits (79), Expect = 0.069
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L++ W D L WN ++ G + R+W+PDV++ N+
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNS 403
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 35.9 bits (79), Expect = 0.069
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L++ W D L WN ++ G + R+W+PDV++ N+
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNS 404
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 35.9 bits (79), Expect = 0.069
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L++ W D L WN ++ G + R+W+PDV++ N+
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNS 404
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.091
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L + W D L WN E+ G + +LW+PDV++ N+
Sbjct: 96 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNS 135
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.091
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L + W D L WN E+ G + +LW+PDV++ N+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNS 121
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.091
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L + W D L WN E+ G + +LW+PDV++ N+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNS 121
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.091
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L + W D L WN E+ G + +LW+PDV++ N+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNS 121
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.091
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L + W D L WN E+ G + +LW+PDV++ N+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNS 121
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.091
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLNA 365
L + W D L WN E+ G + +LW+PDV++ N+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNS 121
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 35.1 bits (77), Expect = 0.12
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLN 362
L + W D L WN E+ G + +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 35.1 bits (77), Expect = 0.12
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 LQMNWIDKRLSWNAXEW-GCSTWLVXSERLWRPDVVLLN 362
L + W D L WN E+ G + +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 33.9 bits (74), Expect = 0.28
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +3
Query: 210 IRESESTVRIQADLQMNWIDKRLSWNAXEWGCSTWLVXSERLWRPDVVLLNAXATTARGI 389
I E + T + + +W+DKRL++ + + + R+W+PD N + I
Sbjct: 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTI 206
Query: 390 XPPRPCILI 416
P + I
Sbjct: 207 TTPNKFVRI 215
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 33.9 bits (74), Expect = 0.28
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +3
Query: 210 IRESESTVRIQADLQMNWIDKRLSWNAXEWGCSTWLVXSERLWRPDVVLLNAXATTARGI 389
I E + T + + +W+DKRL++ + + + R+W+PD N + I
Sbjct: 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTI 206
Query: 390 XPPRPCILI 416
P + I
Sbjct: 207 TTPNKFVRI 215
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 32.7 bits (71), Expect = 0.64
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -2
Query: 461 NGGXXPSALSRRXSXY*NTRARRXYSPGGGCXXV*QYHVRPPQAFRXH--QPSAA--APL 294
+GG P+A R S Y +R S G Q + PPQA + H +PS++ AP
Sbjct: 173 SGGPYPAAAPRPSSSYGPPASRPSSSYGPPPSRPSQSYGPPPQAKKPHHRRPSSSYGAPR 232
Query: 293 PCVPTQSFVDP 261
P P+QS+ P
Sbjct: 233 PAPPSQSYGAP 243
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 177 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEWG-CSTWLVXSERLWRPDVV 353
++ R ++ S ++ + + M+W D RL W ++G ++ R+W+P +
Sbjct: 42 ISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMN 101
Query: 354 LLN 362
+LN
Sbjct: 102 VLN 104
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 177 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEWG-CSTWLVXSERLWRPDVV 353
++ R ++ S ++ + + M+W D RL W ++G ++ R+W+P +
Sbjct: 239 ISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMN 298
Query: 354 LLN 362
+LN
Sbjct: 299 VLN 301
>AY094937-1|AAM11290.1| 394|Drosophila melanogaster RH54416p
protein.
Length = 394
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +2
Query: 377 RPGNTPSAPVYFNNXSXSWIKRLDXXXHFFSXXXLGP 487
RPG TP AP Y NN K D FFS P
Sbjct: 199 RPGYTPPAPGYDNNGGGGAQKPKDKEGGFFSNFFSNP 235
>AE014298-3099|AAN09667.1| 388|Drosophila melanogaster CG32521-PB,
isoform B protein.
Length = 388
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +2
Query: 377 RPGNTPSAPVYFNNXSXSWIKRLDXXXHFFSXXXLGP 487
RPG TP AP Y NN K D FFS P
Sbjct: 199 RPGYTPPAPGYDNNGGGGAQKPKDKEGGFFSNFFSNP 235
>AE014298-3098|AAF50844.2| 388|Drosophila melanogaster CG32521-PA,
isoform A protein.
Length = 388
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +2
Query: 377 RPGNTPSAPVYFNNXSXSWIKRLDXXXHFFSXXXLGP 487
RPG TP AP Y NN K D FFS P
Sbjct: 199 RPGYTPPAPGYDNNGGGGAQKPKDKEGGFFSNFFSNP 235
>BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p
protein.
Length = 612
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 261 WIDKRLSWNAXEWGCSTWLVXSERLWRPDVVLLNAXATTARGIXPP 398
W DKRLS+ S + +++WRPD N + I P
Sbjct: 164 WRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVP 209
>AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA
protein.
Length = 572
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 261 WIDKRLSWNAXEWGCSTWLVXSERLWRPDVVLLNAXATTARGIXPP 398
W DKRLS+ S + +++WRPD N + I P
Sbjct: 150 WRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVP 195
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,994,471
Number of Sequences: 53049
Number of extensions: 572452
Number of successful extensions: 1347
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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