Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G10
(869 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 43 6e-04
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 43 6e-04
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 43 6e-04
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 43 6e-04
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 43 6e-04
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 43 6e-04
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 42 0.001
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 39 0.010
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 39 0.010
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 39 0.010
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 39 0.010
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 37 0.031
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 37 0.031
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 37 0.031
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 37 0.031
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 36 0.055
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 36 0.073
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 36 0.073
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 36 0.073
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 36 0.073
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 36 0.096
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 35 0.17
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 35 0.17
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 35 0.17
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 34 0.22
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 34 0.22
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 34 0.22
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 34 0.22
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 34 0.22
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 34 0.29
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 34 0.29
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 33 0.39
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 33 0.39
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 33 0.39
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 33 0.39
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 33 0.39
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 33 0.39
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 33 0.39
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 31 1.6
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 31 1.6
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 31 1.6
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 31 1.6
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 31 2.7
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 31 2.7
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 29 8.3
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 29 8.3
AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA... 29 8.3
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 150
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N+ E+G L + RLW+PDV++ N+A G YA V NNGS
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 153
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 41.5 bits (93), Expect = 0.001
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = +3
Query: 102 VRQNAKTQHHCPS*STRSSQRTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQM 281
+R ++ + + + SS + + L HS I + + L+L E + L++
Sbjct: 263 LRSSSSSSSNSSNSGNSSSTQILNGLNKHSWIFLLIYLNLSD----EKNQLLVTNVWLKL 318
Query: 282 NWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
W D L N ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 319 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 375
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 38.7 bits (86), Expect = 0.010
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 38.7 bits (86), Expect = 0.010
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 423
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 38.7 bits (86), Expect = 0.010
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 38.7 bits (86), Expect = 0.010
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D L N ++G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 37.1 bits (82), Expect = 0.031
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 159 QRTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTW 338
+R + + ++ LTL + ++ E + A L + W D L N E+G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 339 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 104 LRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.031
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 159 QRTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTW 338
+R + + ++ LTL + ++ E + A L + W D L N E+G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 339 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 104 LRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 37.1 bits (82), Expect = 0.031
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 159 QRTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTW 338
+R + + ++ LTL + ++ E + A L + W D L N E+G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 339 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 104 LRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.031
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 159 QRTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTW 338
+R + + ++ LTL + ++ E + A L + W D L N E+G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 339 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 104 LRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 36.3 bits (80), Expect = 0.055
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWG-CST 335
R +G+ + + L L L N++ T + ++ W D +L N ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 336 WLVSSERLWRPDVVLLNAA 392
V SE +W PD+VL N A
Sbjct: 99 LHVPSEHIWHPDIVLYNNA 117
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 35.9 bits (79), Expect = 0.073
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWR 365
K+ + L L L N++ T + ++ +W D +L E+G L V S+ +WR
Sbjct: 67 KVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWR 124
Query: 366 PDVVLLNAA 392
PD+VL N A
Sbjct: 125 PDIVLYNNA 133
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 35.9 bits (79), Expect = 0.073
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L + W D L N E+G L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 156
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 35.9 bits (79), Expect = 0.073
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L + W D L N E+G L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 35.9 bits (79), Expect = 0.073
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L + W D L N E+G L ++ +LW+PDV++ N+A G Y V +NGS
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 35.5 bits (78), Expect = 0.096
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWG-CST 335
R +G+ + + L L L N++ T + ++ W D +L N ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 336 WLVSSERLWRPDVVLLNAA 392
V SE +W PD+VL N A
Sbjct: 99 LHVPSEHIWLPDIVLYNNA 117
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA 392
++ +W D +L E+G L V S+ +WRPD+VL N A
Sbjct: 59 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 99
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA 392
++ +W D +L E+G L V S+ +WRPD+VL N A
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 118
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA 392
++ +W D +L E+G L V S+ +WRPD+VL N A
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 118
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLW 362
++V L L L N+++ T + L+ W D + + E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 363 RPDVVLLNAA 392
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
Score = 32.3 bits (70), Expect = 0.89
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSDXTTVGCDXXCHVPVQTXDXXXV 675
+P D QTC KFGS + DQ+D + + +G D + P D V
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGV 232
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLW 362
++V L L L N+++ T + L+ W D + + E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 363 RPDVVLLNAA 392
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
Score = 32.3 bits (70), Expect = 0.89
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSDXTTVGCDXXCHVPVQTXDXXXV 675
+P D QTC KFGS + DQ+D + + +G D + P D V
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGV 232
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLW 362
++V L L L N+++ T + L+ W D + + E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 363 RPDVVLLNAA 392
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
Score = 32.3 bits (70), Expect = 0.89
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSDXTTVGCDXXCHVPVQTXDXXXV 675
+P D QTC KFGS + DQ+D + + +G D + P D V
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGV 232
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLW 362
++V L L L N+++ T + L+ W D + + E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 363 RPDVVLLNAA 392
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
Score = 32.3 bits (70), Expect = 0.89
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSDXTTVGCDXXCHVPVQTXDXXXV 675
+P D QTC KFGS + DQ+D + + +G D + P D V
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGV 232
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLW 362
++V L L L N+++ T + L+ W D + + E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 363 RPDVVLLNAA 392
PD+VL N A
Sbjct: 128 LPDIVLYNNA 137
Score = 32.3 bits (70), Expect = 0.89
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSDXTTVGCDXXCHVPVQTXDXXXV 675
+P D QTC KFGS + DQ+D + + +G D + P D V
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGV 232
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 407
N+ E ++ L++ W D +L + ++G + +++W+PD+VL N A G
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 122
Query: 408 DYALR 422
+Y +R
Sbjct: 123 NYEVR 127
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXI--DKRIYSMSDXTTVGCDXXCHVP 648
+P D QTC KFGS DQ+ + +K +SD G VP
Sbjct: 159 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEVP 208
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.29
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L + W D L N E+G L ++ +LW+PDV++ N+A G Y V ++GS
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHSGS 141
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 33.5 bits (73), Expect = 0.39
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 407
N+ E ++ L++ W D +L + ++G + +++W+PD+VL N A G
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 122
Query: 408 DYALR 422
+Y +R
Sbjct: 123 NYEVR 127
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXI--DKRIYSMSDXTTVGCDXXCHVP 648
+P D QTC KFGS DQ+ + +K +SD G VP
Sbjct: 159 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEVP 208
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 33.5 bits (73), Expect = 0.39
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 407
N+ E ++ L++ W D +L + ++G + +++W+PD+VL N A G
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 122
Query: 408 DYALR 422
+Y +R
Sbjct: 123 NYEVR 127
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXI--DKRIYSMSDXTTVGCDXXCHVP 648
+P D QTC KFGS DQ+ + +K +SD G VP
Sbjct: 159 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEVP 208
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 33.5 bits (73), Expect = 0.39
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L + W D L N E+G L ++ +LW+PDV++ N+A G Y V + GS
Sbjct: 96 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTSVVVKHGGS 155
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 33.5 bits (73), Expect = 0.39
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L + W D L N E+G L ++ +LW+PDV++ N+A G Y V + GS
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTSVVVKHGGS 141
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.39
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L + W D L N E+G L ++ +LW+PDV++ N+A G Y V +GS
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKRSGS 156
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 33.5 bits (73), Expect = 0.39
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L + W D L N E+G L ++ +LW+PDV++ N+A G Y V + GS
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHGGS 141
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 33.5 bits (73), Expect = 0.39
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 407
N+ E ++ L++ W D +L + ++G + +++W+PD+VL N A G
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 122
Query: 408 DYALR 422
+Y +R
Sbjct: 123 NYEVR 127
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXI--DKRIYSMSDXTTVGCDXXCHVP 648
+P D QTC KFGS DQ+ + +K +SD G VP
Sbjct: 159 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEVP 208
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLN 386
++ W D +L + E+G L V SE +W PD+VL N
Sbjct: 63 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 101
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLN 386
++ W D +L + E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLN 386
++ W D +L + E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLN 386
++ W D +L + E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 30.7 bits (66), Expect = 2.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L + W D L N E+G L ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 30.7 bits (66), Expect = 2.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L + W D L N E+G L ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVSSERLWRPDVVLLN 386
I E + T + + +W+DKRL + + + R+W+PD N
Sbjct: 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYN 197
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVSSERLWRPDVVLLN 386
I E + T + + +W+DKRL + + + R+W+PD N
Sbjct: 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYN 197
>AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA
protein.
Length = 241
Score = 29.1 bits (62), Expect = 8.3
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 171 GSLPPHSKIVVNLTLHLRHANI-RESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVS 347
GSLPP I TL A + +E + + ++ DK + AG+W S WL
Sbjct: 8 GSLPPSGTIAKPSTLTSSMATWGKGAEVKGKNPVNQKVINKDKIVSPPAGDWNTSHWLWG 67
Query: 348 SERLWRPDVVLLNAAATT 401
+ER R L N +T
Sbjct: 68 AERCNRRGRALANLVLST 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,259,015
Number of Sequences: 53049
Number of extensions: 676480
Number of successful extensions: 1782
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -