Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G10
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 42 4e-04
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 42 4e-04
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 40 0.003
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 40 0.003
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 39 0.005
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 38 0.009
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 38 0.009
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.009
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.009
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 38 0.012
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 37 0.016
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 37 0.016
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 37 0.016
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 37 0.016
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 37 0.016
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 37 0.016
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 37 0.022
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 37 0.022
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 37 0.022
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 37 0.022
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 37 0.022
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.028
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 36 0.038
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 36 0.050
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 35 0.066
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 35 0.066
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 35 0.066
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 35 0.066
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 35 0.066
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 34 0.11
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 34 0.11
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 34 0.11
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 34 0.11
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 34 0.11
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 34 0.11
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 34 0.11
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 34 0.15
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 34 0.15
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 34 0.15
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 34 0.15
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 33 0.20
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 33 0.27
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 33 0.27
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.35
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 31 0.81
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 31 1.1
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 1.4
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 30 1.9
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 30 1.9
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 30 1.9
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 30 1.9
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 29 5.7
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 29 5.7
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 29 5.7
Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical p... 28 7.5
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 28 10.0
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 28 10.0
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +3
Query: 180 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG--CSTWLVSS 350
PP + V L L H I E + T+ +L + +W+D L + +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 351 ERLWRPDVVLLNAAATTAGDYALR--ARVSNNGS-VSXHKAL 467
+++W PD+++ N A A+R AR+ NG+ V+ H A+
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAV 183
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA 392
L+M W DK+L N +WG ++ + S+++W PD+VL N A
Sbjct: 81 LEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNA 121
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +3
Query: 180 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG--CSTWLVSS 350
PP + V L L H I E + T+ +L + +W+D L + +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 351 ERLWRPDVVLLNAAATTAGDYALR--ARVSNNGS-VSXHKAL 467
+++W PD+++ N A A+R AR+ NG+ V+ H A+
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAV 183
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +3
Query: 180 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG--CSTWLVSS 350
PP + V L L H I E + T+ +L + +W+D L + +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 351 ERLWRPDVVLLNAAATTAGDYALR--ARVSNNGS-VSXHKAL 467
+++W PD+++ N A A+R AR+ NG+ V+ H A+
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAV 183
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAA 392
N+ E ++ L M W D +L N E+G S V S+R+W PD+VL N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAA 392
N+ E ++ L M W D +L N E+G S V S+R+W PD+VL N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA 392
++ E + + + L +W+D RL N E+G T + E LW PD++L N A
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNA 98
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 487 SMXLDXWPNDMQTCTFKFGSXMHXSDQMD 573
++ ++ +P D+Q C KFGS + Q++
Sbjct: 131 NIDIEWYPYDLQICELKFGSWTYGGSQLN 159
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 180 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG--CSTWLVSS 350
PP + V L L H I E + T+ +L + +W+D L + +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 351 ERLWRPDVVLLN 386
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAA 392
L +NW+D RL N W + R+W+PD++L+N A
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNA 205
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 180 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG--CSTWLVSS 350
PP + V L L H I E + T+ +L + +W+D L + +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 351 ERLWRPDVVLLN 386
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 180 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG--CSTWLVSS 350
PP + V L L H I E + T+ +L + +W+D L + +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 351 ERLWRPDVVLLN 386
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 37.5 bits (83), Expect = 0.012
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +3
Query: 186 HSKIV-VNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSER 356
H K V V L L L+ ++ E + ++ Q W D +L + E+G T L +
Sbjct: 46 HRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLRWSPEEYGNITTLQIPHGT 105
Query: 357 LWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 449
LW+PD++L N+A + + VS+NG V
Sbjct: 106 LWKPDILLFNSANEHFDASFPVHMVVSSNGDV 137
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA 392
L+M W D RL + G WG L V +++W PD++L N A
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 174 SLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVS 347
S P+ + + L L L ++ E + + L+ WID++L + +G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 348 SERLWRPDVVLLNAA 392
E +W PD+VL N A
Sbjct: 105 YEMIWVPDIVLYNNA 119
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 174 SLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVS 347
S P+ + + L L L ++ E + + L+ WID++L + +G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 348 SERLWRPDVVLLNAA 392
E +W PD+VL N A
Sbjct: 105 YEMIWVPDIVLYNNA 119
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 174 SLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVS 347
S P+ + + L L L ++ E + + L+ WID++L + +G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 348 SERLWRPDVVLLNAA 392
E +W PD+VL N A
Sbjct: 105 YEMIWVPDIVLYNNA 119
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.016
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Frame = +3
Query: 195 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRP 368
+VV L L ++ E + LQ +W+D +L + E+G V S+ +W P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 369 DVVLLNAAATTAGDYAL----RARVSNNGSV 449
DVVL N A G+Y + +A+++ NG+V
Sbjct: 112 DVVLYNNA---DGNYQVTIMTKAKLTYNGTV 139
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.016
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Frame = +3
Query: 195 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRP 368
+VV L L ++ E + LQ +W+D +L + E+G V S+ +W P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 369 DVVLLNAAATTAGDYAL----RARVSNNGSV 449
DVVL N A G+Y + +A+++ NG+V
Sbjct: 112 DVVLYNNA---DGNYQVTIMTKAKLTYNGTV 139
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 201 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVSSERLWRPDVV 377
VN+ L + H + E E T + + WID+ + +A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 378 LLNAA 392
L N+A
Sbjct: 114 LYNSA 118
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 36.7 bits (81), Expect = 0.022
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL 341
R LP KI + L L + N+ E E + L M W D +L + ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 342 -VSSERLWRPDVVLLNAA 392
V+ E++W PD+VL N A
Sbjct: 114 RVAPEKVWLPDIVLFNNA 131
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTA-- 404
+ E + V I L++ WID+ L + ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 405 GDYALRARVSNNGSVSXHKAL 467
+ A V N G V +++
Sbjct: 129 NEMETNAIVDNTGRVMLFRSM 149
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 36.7 bits (81), Expect = 0.022
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL 341
R LP KI + L L + N+ E E + L M W D +L + ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 342 -VSSERLWRPDVVLLNAA 392
V+ E++W PD+VL N A
Sbjct: 114 RVAPEKVWLPDIVLFNNA 131
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 36.7 bits (81), Expect = 0.022
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL 341
R LP KI + L L + N+ E E + L M W D +L + ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 342 -VSSERLWRPDVVLLNAA 392
V+ E++W PD+VL N A
Sbjct: 114 RVAPEKVWLPDIVLFNNA 131
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTA-- 404
+ E + V I L++ WID+ L + ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 405 GDYALRARVSNNGSVSXHKAL 467
+ A V N G V +++
Sbjct: 129 NEMETNAIVDNTGRVMLFRSM 149
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 180 PPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEW-GCSTWLVSSER 356
PP +++ + + + L+ ++ E E V L D W D+RL N E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 357 LWRPDVVLLNA 389
+W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.028
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +3
Query: 201 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVSSERLWRPDVV 377
V + L++ H + E E T + L +W D+ L ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 378 LLNAAATTAGDY---ALRARVSNNGSV 449
L N+A + L A V N G V
Sbjct: 114 LYNSARGNSWSLYLTGLPAIVYNTGKV 140
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/71 (21%), Positives = 35/71 (49%)
Frame = +3
Query: 189 SKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVSSERLWRP 368
+K+V ++ + + I E V++ ++W D + + +WG S ++W P
Sbjct: 83 TKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWGLSWLNFYWIQIWTP 142
Query: 369 DVVLLNAAATT 401
++V +N +T+
Sbjct: 143 NIVQINGGSTS 153
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 35.5 bits (78), Expect = 0.050
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +3
Query: 186 HSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLXXNAGEWGCSTWL-VSSE 353
HSK +N+T I + + +IL ++++W+D +L + + T + + S+
Sbjct: 20 HSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPRLYQNVTRIHIPSD 79
Query: 354 RLWRPDVVLLNAA 392
++W+PD++L N A
Sbjct: 80 KIWKPDIILYNNA 92
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 35.1 bits (77), Expect = 0.066
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +3
Query: 195 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLV---SSERLW 362
+VV++ ++L+ ++ E + ++A ++ W D +L + E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 363 RPDVVLLNAA-ATTAGDYALRARVSNNGSV 449
+PDV+L N+A Y + VS G V
Sbjct: 113 KPDVLLYNSADENFDSTYPVNYVVSYTGDV 142
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGD 410
+ E++ + + ++ W D+ L N ++G L V SE +W+PD+++ N A +
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 123
Query: 411 YALR--ARVSNNGSVSXHKAL 467
++ ++ + G +S +A+
Sbjct: 124 NEMQTNVQIEHTGKISLFRAI 144
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGD 410
+ E++ + + ++ W D+ L N ++G L V SE +W+PD+++ N A +
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 123
Query: 411 YALR--ARVSNNGSVSXHKAL 467
++ ++ + G +S +A+
Sbjct: 124 NEMQTNVQIEHTGKISLFRAI 144
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGD 410
+ E++ + + ++ W D+ L N ++G L V SE +W+PD+++ N A +
Sbjct: 48 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 107
Query: 411 YALR--ARVSNNGSVSXHKAL 467
++ ++ + G +S +A+
Sbjct: 108 NEMQTNVQIEHTGKISLFRAI 128
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 35.1 bits (77), Expect = 0.066
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 195 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRP 368
++V + L L+ ++ E V + A L+ +W+D L ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 369 DVVLLNAAATTAGD-YALRARVSNNGSVS 452
DV++ N+A YA V NG V+
Sbjct: 111 DVLMYNSADPQFDSRYASNLLVYPNGLVN 139
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWG------CSTWLVSSERLWRPDVVLLNAA 392
++ E + ILA + +W D +L + +G S +S +LWRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 393 ATT-AGDYALRARVSNNGSV 449
+ + Y+ R VS+NG V
Sbjct: 119 SESFDSTYSSRFIVSSNGDV 138
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +3
Query: 186 HSK-IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSER 356
HS+ + V+L + L+ ++ E V + A L W D L + E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 357 LWRPDVVLLNAAAT 398
+W+PDV+L N+ T
Sbjct: 104 IWKPDVLLYNSVDT 117
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +3
Query: 198 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLXXNAGEW-GCSTWLVSSERLWR 365
V+N+T+ + N + E ++IL +W D L + EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 366 PDVVLLNAAATTAGDYALRARVSNNGSV 449
PD + N T ARV +G V
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRV 147
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +3
Query: 186 HSK-IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSER 356
HS+ + V+L + L+ ++ E V + A L W D L + E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 357 LWRPDVVLLNAAAT 398
+W+PDV+L N+ T
Sbjct: 104 IWKPDVLLYNSVDT 117
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +3
Query: 198 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLXXNAGEW-GCSTWLVSSERLWR 365
V+N+T+ + N + E ++IL +W D L + EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 366 PDVVLLNAAATTAGDYALRARVSNNGSV 449
PD + N T ARV +G V
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRV 147
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +3
Query: 186 HSK-IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSER 356
HS+ + V+L + L+ ++ E V + A L W D L + E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 357 LWRPDVVLLNAAAT 398
+W+PDV+L N+ T
Sbjct: 104 IWKPDVLLYNSVDT 117
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +3
Query: 186 HSK-IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSER 356
HS+ + V+L + L+ ++ E V + A L W D L + E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 357 LWRPDVVLLNAAAT 398
+W+PDV+L N+ T
Sbjct: 104 IWKPDVLLYNSVDT 117
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL 341
R LP K+ + L L + N+ E + + L + W D ++ N +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 342 -VSSERLWRPDVVLLNAA 392
VS +++W PD+VL N A
Sbjct: 106 RVSPDKVWLPDIVLFNNA 123
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL 341
R LP K+ + L L + N+ E + + L + W D ++ N +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 342 -VSSERLWRPDVVLLNAA 392
VS +++W PD+VL N A
Sbjct: 106 RVSPDKVWLPDIVLFNNA 123
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 201 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLV---SSERLWRP 368
V + L L+ ++ E V + A L W D +L ++G + SS+ +W+P
Sbjct: 53 VKIKLFLQQILDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKP 112
Query: 369 DVVLLNAAA 395
DV+L N+AA
Sbjct: 113 DVLLYNSAA 121
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL 341
R LP K+ + L L + N+ E + + L + W D ++ N +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 342 -VSSERLWRPDVVLLNAA 392
VS +++W PD+VL N A
Sbjct: 106 RVSPDKVWLPDIVLFNNA 123
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 219 LRHANIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 395
+R ++ E + L+M W D +L ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 219 LRHANIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 395
+R ++ E + L+M W D +L ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTW-LVSSERLWRPDV 374
L+++W D+RL N EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTW-LVSSERLWRPDV 374
L+++W D+RL N EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 150 RSSQRTIGSLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWG 326
R + T+ S P +VV+L + L+ N+ E E + + A L+ W D+ L +
Sbjct: 35 REERPTLDSSKP---VVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLRWEPTAYE 91
Query: 327 CSTWLVSS-ERLWRPDVVLLNA 389
T L + LW PD++L N+
Sbjct: 92 NVTDLRHPPDALWTPDILLYNS 113
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +3
Query: 168 IGSLPPH----SKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCS 332
I S+PP+ + +N L+H + E + I L+++W D RL N W +
Sbjct: 47 IASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWHDDRLMWNQDTWKKN 106
Query: 333 TWLVSS-ERLWRP 368
+V S +W P
Sbjct: 107 KLVVHSFHHIWVP 119
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVSSER-LWRP 368
+++N++++ + +E T+ ++ + W D+ L N ++ TWL E LW P
Sbjct: 53 LIINISMNTMSVLTLDPAEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 369 DVVLLNAAAT 398
D + + T
Sbjct: 112 DTTVSTSIDT 121
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD 410
+ E +++L +W D L + EW G + +W PD + N T
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEETDTL 127
Query: 411 YALRARVSNNGSV 449
RV NG V
Sbjct: 128 DNHNVRVHYNGKV 140
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 460 KRLDIXTPISMXLDXWPNDMQTCTFKFGSXMHXSDQMDFXI 582
K +D+ P+S+ +P D+Q C +FGS + S + F +
Sbjct: 146 KLIDLICPMSVL--SFPFDVQLCALQFGSWTYQSHALSFNV 184
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWLVSSERLWRPDVVLLNA 389
L M W D+RL N T + ++R+W PD+ +N+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNS 213
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 195 IVVNLTLH-LRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVSSER-LWRP 368
+ +N++++ + + +E T+ + + W D+ L N ++ TWL E LW P
Sbjct: 53 LFINISINSMSFLTLDPAEETINFSGEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 369 DVVLLNAAAT 398
D + + T
Sbjct: 112 DTTVSTSIDT 121
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEW-GCSTWLVSSERLWRPDVVLLNAA 392
N+ E ++ M W D ++ + E+ G T V +++W PD+VL N A
Sbjct: 65 NVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNA 119
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEW-GCSTWLVSSERLWRPDVVLLNAA 392
N+ E ++ M W D ++ + E+ G T V +++W PD+VL N A
Sbjct: 65 NVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNA 119
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 213 LHLRHAN-IRESESTVRILADLQMNWIDKRLXXNAGEW-GCSTWLVSSERLWR 365
LH+ H + I++ + +++ W+D+RL N + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNA 389
L+M+W D L + E+G + +W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWG-CSTWLVSSERLWRPDVVLLNA 389
L+M+W D L + E+G + +W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 240 ESESTVRILADLQMNWIDKRLXXNAGEWGCST-WL-VSSERLWRPDVVLLN 386
+++ T++ + + W D L N W+ +S+ R W PDV+ N
Sbjct: 67 QTQETIQYSEEFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSD 609
+P D+Q C+ FGS H +D + + + + S+ D
Sbjct: 89 FPFDVQQCSLLFGSWAHSNDSIKYSLYSQNLSLID 123
>Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSD 609
+P D+Q C+ FGS H +D + + + + S+ D
Sbjct: 89 FPFDVQQCSLLFGSWAHSNDSIKYSLYSQNLSLID 123
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 255 VRILADLQMNWIDKRLXXNAGEWGCST---WLVSSERLWRPDVVLLNAAA 395
+ + A L+ W+D RL + ++ T + ++WRPD++L N+A+
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSAS 61
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 27.9 bits (59), Expect = 10.0
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 177 LPPHSKIVVNLTLHLRHANIRESESTVRILADLQMN--WIDKRLXXNAGEWGCSTWLVS- 347
+P ++ + V++ L ++ + SE + +AD+ + W D RL + L S
Sbjct: 52 VPSNNSVQVSVELTVQDIS-SISEISSSFIADVWFSQVWYDPRLEYRNISCKTNLSLDSY 110
Query: 348 -SERLWRPDVVLLNAAAT 398
SERLW P+V +N+ +T
Sbjct: 111 VSERLWTPNVCFVNSKST 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,105,421
Number of Sequences: 27780
Number of extensions: 310136
Number of successful extensions: 872
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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