Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G10
(869 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 41 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 38 2e-04
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 36 6e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 36 6e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 8e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 35 8e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 35 8e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 35 8e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 34 0.001
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 34 0.002
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 34 0.002
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 31 0.018
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 27 0.23
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.23
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 0.69
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 25 1.2
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.1 bits (92), Expect = 1e-05
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L N E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGS 446
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVG 624
+P D Q C KFGS + +Q+D + +SD T G
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNG 226
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.1 bits (92), Expect = 1e-05
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L N E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGS 446
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVG 624
+P D Q C KFGS + +Q+D + +SD T G
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNG 226
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L N E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVG 624
+P D Q C KFGS + +Q+D + +SD T G
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNG 158
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L N E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 27.5 bits (58), Expect = 0.17
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 490 MXLDXWPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVG 624
M + +P D Q C KFGS + +Q+D + +SD T G
Sbjct: 113 MDVAWFPFDDQHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNG 158
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L N E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVG 624
+P D Q C KFGS + +Q+D + +SD T G
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNG 158
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L N E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVG 624
+P D Q C KFGS + +Q+D + +SD T G
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNG 158
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L N E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVG 624
+P D Q C KFGS + +Q+D + +SD T G
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNG 158
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L N E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 27.9 bits (59), Expect = 0.13
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 490 MXLDXWPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVG 624
M + +P D Q C KFGS + +Q+D + +SD T G
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNG 158
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.5 bits (83), Expect = 2e-04
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D + N ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXI 582
+P D Q C KFGS + Q+D +
Sbjct: 155 FPFDDQRCEMKFGSWTYDGFQLDLQL 180
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +3
Query: 456 HKALGHXHSNFYAXRQXAQRHA 521
H +GH HS+ +A HA
Sbjct: 416 HHTMGHGHSHIHATPHHHHSHA 437
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 35.5 bits (78), Expect = 6e-04
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWG-CST 335
R +G+ + + L L L N++ T + ++ W D +L N ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 336 WLVSSERLWRPDVVLLNAA 392
V SE +W PD+VL N A
Sbjct: 95 LHVPSEHIWLPDIVLYNNA 113
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 496 LDXWPNDMQTCTFKFGSXMHXSDQMD 573
++ +P D QTC KFGS + +D
Sbjct: 149 VEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 35.5 bits (78), Expect = 6e-04
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLW 362
+VV L L L N+++ T + L+ W D + + E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 363 RPDVVLLNAA 392
PD+VL N A
Sbjct: 104 LPDIVLYNNA 113
Score = 30.7 bits (66), Expect = 0.018
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRI-YSMSDXTTVGCDXXCHVPVQTXDXXXV 675
+P D QTC KFGS + Q+D K I +M D +G D + P D V
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQIDL---KHINQNMGDKVEIGIDLREYYPSVEWDILGV 206
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.1 bits (77), Expect = 8e-04
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSDXT 615
WP D C FGS +H ++++ +DK+ + M T
Sbjct: 176 WPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHMDGYT 212
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.1 bits (77), Expect = 8e-04
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLNAA 392
PD+VL N A
Sbjct: 113 PDIVLYNNA 121
Score = 28.7 bits (61), Expect = 0.074
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 487 SMXLDXWPNDMQTCTFKFGSXMHXSDQMDF-XIDKRIYSMSDXTTVGCD 630
S+ ++ +P D+QTC K GS + ++D +D++ S S+ VG D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVDLRHMDEK--SGSNVVDVGVD 200
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.1 bits (77), Expect = 8e-04
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLNAA 392
PD+VL N A
Sbjct: 113 PDIVLYNNA 121
Score = 27.9 bits (59), Expect = 0.13
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 496 LDXWPNDMQTCTFKFGSXMHXSDQMDF-XIDKRIYSMSDXTTVGCD 630
++ +P D QTC KFGS + ++D +D++ S S+ VG D
Sbjct: 157 VEYFPFDEQTCVLKFGSWTYDGFKVDLRHMDEK--SGSNVVDVGVD 200
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 35.1 bits (77), Expect = 8e-04
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA 392
++ +W D +L + E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 496 LDXWPNDMQTCTFKFGSXMHXSDQMD 573
++ +P D QTC KFGS + Q+D
Sbjct: 153 VEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 34.3 bits (75), Expect = 0.001
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXXNAGEWGCSTWL-VSSERLWRPDVVLLNAA 392
++ W D +L N E+G L V SE +W PD+VL N A
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
Score = 26.2 bits (55), Expect = 0.39
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 496 LDXWPNDMQTCTFKFGSXMHXSDQMD 573
++ +P D Q+C KFGS + Q+D
Sbjct: 162 VEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 33.9 bits (74), Expect = 0.002
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXXNAGEWG-CSTWLVSSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L + ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALR 422
PD+VL N A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
Score = 31.1 bits (67), Expect = 0.014
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQMDFXI--DKRIYSMSDXTTVGCDXXCHVP 648
+P D QTC KFGS DQ+ + +K +SD G +VP
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINVP 207
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 33.9 bits (74), Expect = 0.002
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXXNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L NA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAA 392
+L N A
Sbjct: 92 TILYNNA 98
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 30.7 bits (66), Expect = 0.018
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLVSSERLWRPDVVLLN 386
I E + T + + +W+D+RL G+ + + R+W+PD N
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 26.6 bits (56), Expect = 0.30
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 463 RLDIXTPISMXLDXWPNDMQTCTFKFGS 546
RL I M L+ +P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 27.1 bits (57), Expect = 0.23
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +3
Query: 177 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXXNAGEWGCSTWLV 344
LP H K VV + +R + E + + + +W D RL S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 345 SSERLWRPDVVLLN 386
ER+WRPD N
Sbjct: 113 MLERIWRPDTYFYN 126
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 463 RLDIXTPISMXLDXWPNDMQTCTFKFGSXMHXSDQMDFXID 585
+L + +M +P+D Q C + S H +D+M F D
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 25.4 bits (53), Expect = 0.69
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +1
Query: 457 IKRLDIXTPISMXLDXWPNDMQTCTFKFGSXMHXSDQMDFXIDKRIYSMSDXTTV 621
+ +L + +M + +P+D Q C+ S H + + F I++M+D V
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF-----IWNMTDPLVV 172
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSXMHXSDQM 570
WP D+ CT S H S+++
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,105
Number of Sequences: 438
Number of extensions: 3803
Number of successful extensions: 57
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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